Comparative Cytogenetics of Hoplerythrinus unitaeniatus (Agassiz, 1829) (Characiformes, Erythrinidae) Species Complex from Different Brazilian Hydrographic Basins

2016 ◽  
Vol 149 (3) ◽  
pp. 191-200 ◽  
Author(s):  
Juliana F. Martinez ◽  
Roberto L. Lui ◽  
Josiane B. Traldi ◽  
Daniel R. Blanco ◽  
Orlando Moreira-Filho
Keyword(s):  
Silver Nitrate ◽  
Species Complex ◽  
5S Rdna ◽  
River Basins ◽  
Telomeric Sequence ◽  
Comparative Cytogenetics ◽  
C Banding ◽  
Araguaia River ◽  
Rdna Sites ◽  
Hoplerythrinus Unitaeniatus

Chromosomal characteristics of Hoplerythrinus unitaeniatus populations from 5 Brazilian river basins, namely Arinos (Amazonas basin), Araguaia, Paraguai, Alto Paraná, and São Francisco were analyzed by conventional Giemsa staining, C-banding, silver nitrate impregnation, and fluorescence in situ hybridization (FISH) with 18S and 5S rDNA and telomeric sequence (TTAGGG)n probes. The diploid chromosome number was 2n = 48 in representatives of the populations from Paraguai and Alto Paraná River basins and 2n = 52 for those from the Arinos and Araguaia River basins. The São Francisco population had individuals with 2n = 50 and 52 occurring in sympatry. C-banding showed heterochromatic blocks mainly located at interstitial and pericentromeric positions in most of the chromosomes. Silver nitrate impregnation demonstrated simple NORs for representatives from Arinos and Araguaia River populations and multiple NORs for specimens from Paraguai, Alto Paraná, and São Francisco River populations. FISH with 18S and 5S rDNA probes revealed many chromosomes carrying these cistrons, with up to 21 chromosomes bearing 18S rDNA sites (Alto Rio Paraná basin) and up to 12 chromosomes with 5S rDNA sites (Paraguai basin), besides the occurrence of colocalization in all populations. FISH with telomeric sequence (TTAGGG)n detected sites in the terminal portion of the chromosomes in all populations. These data reinforce the idea that H. unitaeniatus is a species complex. Evolutionary and biogeographical aspects of the group in the Neotropical region are discussed.

scholarly journals Contributions to the taxonomy of Trachelyopterus (Siluriformes): comparative cytogenetic analysis in three species of Auchenipteridae

2021 ◽  
Vol 19 (1) ◽  
Author(s):  
Dayane Petik dos Santos ◽  
Denise Felicetti ◽  
Lucas Baumgärtner ◽  
Vladimir Pavan Margarido ◽  
Daniel Rodrigues Blanco ◽  
...  
Keyword(s):  
Chromosome Pair ◽  
5S Rdna ◽  
Pericentromeric Region ◽  
Sympatric Species ◽  
Metacentric Chromosome ◽  
Submetacentric Chromosome ◽  
Araguaia River ◽  
Rdna Sites ◽  
Karyotype Formula ◽  
Almost All

ABSTRACT Auchenipteridae is divided into subfamilies Centromochlinae and Auchenipterinae. Parauchenipterus is included in the latter and is subject of taxonomic discussions concerning its validation or synonymization with Trachelyopterus. Herein, three species from two hydrographic basins were cytogenetically analyzed: Parauchenipterus striatulus from Doce River and two sympatric species, P. galeatus and Trachelyopterus coriaceus, from the Araguaia River. Diploid number of 58 chromosomes was verified for all species, but P. striatulus has different karyotype formula from the others. The three species have heterochromatin located in terminal regions of almost all chromosomes and in pericentromeric region on acrocentric chromosomes. Simple NORs was verified on a subtelocentric chromosome for all species. 5S rDNA sites were detected in three submetacentric chromosome pairs in P. striatulus; in a metacentric chromosome pair and submetacentric pair in T. coriaceus; and in one metacentric chromosome pair in P. galeatus. The similarities found in the karyotypes of the three species suggest the existence of only one genus, Trachelyopterus; therefore, our data refutes the validation of Parauchenipterus. Moreover, the differences in 5S rDNA distribution in P. galeatus in comparison with other populations already studied, indicate the existence of a new taxonomic unit, which suggests a species complex in P. galeatus.

scholarly journals Comparative cytogenetics in different populations of the cavernicolous diplopod Pseudonannolene strinatii (Diplopoda, Pseudonannolenidae)

2013 ◽  
Vol 103 (1) ◽  
pp. 42-46
Author(s):  
Kleber A. Campos ◽  
Carmem S. Fontanetti
Keyword(s):  
Silver Nitrate ◽  
Constitutive Heterochromatin ◽  
Sao Paulo ◽  
São Paulo ◽  
Comparative Cytogenetics ◽  
C Banding ◽  
Different Populations

Different populations of Pseudonannolene strinatii Mauriès, 1974 collected from three caves in Iporanga, state of São Paulo, were cytogenetically compared using techniques of conventional coloration, C-banding and silver nitrate impregnation. Specimens were morphologically similar and small cytogenetic differences were observed between the populations with relation to the distribution of constitutive heterochromatin.

scholarly journals Comparative cytogenetic survey of the giant bonytongue Arapaima fish (Osteoglossiformes: Arapaimidae), across different Amazonian and Tocantins/Araguaia River basins

2020 ◽  
Vol 18 (4) ◽  
Author(s):  
Ezequiel A. de Oliveira ◽  
Francisco de M. C. Sassi ◽  
Manolo F. Perez ◽  
Luiz A. C. Bertollo ◽  
Petr Ráb ◽  
...  
Keyword(s):  
River Basins ◽  
Comparative Genomic ◽  
South American ◽  
Molecular Cytogenetic ◽  
Araguaia River ◽  
Rdna Sites ◽  
Cytogenetic Survey ◽  
Acrocentric Chromosomes ◽  
Great Portion

Abstract The South American giant fishes of the genus Arapaima, commonly known as pirarucu, are one of the most iconic among Osteoglossiformes. Previously cytogenetic studies have identified their karyotype characteristics; however, characterization of cytotaxonomic differentiation across their distribution range remains unknown. In this study, we compared chromosomal characteristics using conventional and molecular cytogenetic protocols in pirarucu populations from the Amazon and Tocantins-Araguaia river basins to verify if there is differentiation among representatives of this genus. Our data revealed that individuals from all populations present the same diploid chromosome number 2n=56 and karyotype composed of 14 pairs of meta- to submetacentric and 14 pairs of subtelo- to acrocentric chromosomes. The minor and major rDNA sites are in separate chromosomal pairs, in which major rDNA sites corresponds to large heterochromatic blocks. Comparative genomic hybridizations (CGH) showed that the genome of these populations shared a great portion of repetitive elements, due to a lack of substantial specific signals. Our comparative cytogenetic data analysis of pirarucu suggested that, although significant genetic differences occur among populations, their general karyotype patterns remain conserved.

Cytogenetic Characterization of Two Metynnis Species (Characiformes, Serrasalmidae) Reveals B Chromosomes Restricted to the Females

2019 ◽  
Vol 158 (1) ◽  
pp. 38-45 ◽  
Author(s):  
Ramon M. Favarato ◽  
Leila Braga Ribeiro ◽  
Rafaela P. Ota ◽  
Celeste M. Nakayama ◽  
Eliana Feldberg
Keyword(s):  
5S Rdna ◽  
B Chromosome ◽  
B Chromosomes ◽  
C Banding ◽  
Retrotransposable Elements ◽  
Rdna Sites ◽  
Species Pairs ◽  
Cytogenetic Characterization ◽  
Female Genome

Karyotypes and chromosomal characteristics with focus on B chromosomes of 2 species of the serrasalmid genus Metynnis, namely M. lippincottianus and M. maculatus, were examined using conventional (C-banding) and molecular (FISH mapping of minor and major rDNAs and Rex1, Rex3, and Rex6 retrotransposable elements) protocols. Both species possessed a diploid chromosome number of 2n = 62 and karyotypes composed of 32 metacentric + 28 submetacentric + 2 subtelocentric and 32 metacentric + 26 submetacentric + 4 subtelocentric, respectively; one small B element was found in the female genome of M. lippincottianus. C-banding revealed heterochromatin in the pericentromeric and terminal portions of all chromosomes of both species; the B chromosome was entirely heterochromatic. FISH showed 18S rDNA sites in 2 chromosome pairs in both species (pairs 19 and 22), and a large block in the B chromosome, while 5S rDNA signals were detected in the first pair of subtelocentric chromosomes in both species, moreover in M. maculatus an additional labeled pair 4 was observed. Mapping of the Rex1, Rex3, and Rex6 retrotransposable elements in the genomes of M. lippincottianus and M. maculatus indicated that they were dispersed throughout nearly all the chromosomes of the complement, except for the B chromosome of M. lippincottianus.

New Comparative Cytogenetic Data on Three Genera of Armored Catfishes of Ancistrini (Loricariidae: Hypostominae)

2019 ◽  
Vol 159 (4) ◽  
pp. 208-214
Author(s):  
Sandra Mariotto ◽  
Liano Centofante ◽  
Paulo C. Venere ◽  
Daniela C. Ferreira ◽  
Roberto F. Artoni
Keyword(s):  
Dna Barcoding ◽  
Diploid Number ◽  
Chromosomal Rearrangements ◽  
5S Rdna ◽  
Coi Gene ◽  
Published Data ◽  
Distance Analysis ◽  
C Banding ◽  
Mtdna Coi ◽  
Rdna Sites

The karyotypes and other chromosomal markers of 4 catfish species, namely Lasiancistrus schomburgkii, Lasiancistrus sp., Araichthysloro, and Megalancistrus sp., members of a taxonomically complex and speciose tribe of catfishes Ancistrini, Hypostominae, were examined using conventional (Giemsa staining, Ag-NOR, and C-banding) and molecular cytogenetic protocols (FISH) and DNA barcoding. In L. schomburgkii, Lasiancistrus sp., and A.loro a diploid number 2n = 54 was observed, with karyotypes composed of 28m + 16sm + 10st, 36m + 12sm + 6st chromosomes, while Megalancistrus sp. had 2n = 52, with the karyotype composed of 28m + 16sm + 8st chromosomes. The Ag-NOR phenotypes were simple in all 4 species, which was confirmed by FISH with an 18S rDNA probe. However, the positive 5S rDNA sites varied among species: 2 chromosome pairs in L. schomburgkii, Lasiancistrus sp., and A. loro, and only 1 pair in Megalancistrus sp. The blocks of constitutive heterochromatin were poorly visible in the pericentromeric and telomeric regions of most chromosomes of the examined species by C-banding. The genetic distance analysis, based on mtDNA COI gene sequences (DNA barcoding), confirmed the species as 4 taxonomic units. Ours and other published data indicate that karyotype differentiation among Ancistrini is complex and divergent and indicates the occurrence of common chromosomal rearrangements, such as pericentric inversions conserving the diploid number, and other rearrangements that are more frequent in some genera, such as centric fusions in Ancistrus.

Identification of sibling species in the genus Eucyclops from water-bodies of Ukraine and Russia using crossbreeding studies

2014 ◽  
Vol 25 (1-2) ◽  
pp. 61-68 ◽  
Author(s):  
V. I. Monchenko ◽  
L. P. Gaponova ◽  
V. R. Alekseev
Keyword(s):  
Cryptic Species ◽  
River Basin ◽  
Black Sea ◽  
Species Complex ◽  
River Basins ◽  
Water Bodies ◽  
Similar Species ◽  
Basin Water ◽  
Different Populations ◽  
Baltic Sea Basin

Crossbreeding experiments were used to estimate cryptic species in water bodies of Ukraine and Russia because the most useful criterion in species independence is reproductive isolation. The problem of cryptic species in the genus Eucyclops was examined using interpopulation crosses of populations collected from Baltic Sea basin (pond of Strelka river basin) and Black Sea basin (water-reservoires of Dnieper, Dniester and Danube rivers basins). The results of reciprocal crosses in Eucyclops serrulatus-group are shown that E. serrulatus from different populations but from water bodies belonging to the same river basin crossed each others successfully. The interpopulation crosses of E. serrulatus populations collected from different river basins (Dnipro, Danube and Dniester river basins) were sterile. In this group of experiments we assigned evidence of sterility to four categories: 1) incomplete copulation or absence of copulation; 2) nonviable eggs; 3) absence of egg membranes or egg sacs 4) empty egg membranes. These crossbreeding studies suggest the presence of cryptic species in the E. serrulatus inhabiting ecologically different populations in many parts of its range. The same crossbreeding experiments were carries out between Eucyclops serrulatus and morphological similar species – Eucyclops macruroides from Baltic and Black Sea basins. The reciprocal crossings between these two species were sterile. Thus taxonomic heterogeneity among species of genus Eucyclops lower in E. macruroides than in E. serrulatus. The interpopulation crosses of E. macruroides populations collected from distant part of range were fertile. These crossbreeding studies suggest that E. macruroides species complex was evaluated as more stable than E. serrulatus species complex.

Effects of the diploidisation process upon the 5S and 35S rDNA sequences in the allopolyploid species of the Dilatata group of Paspalum (Poaceae, Paniceae)

2019 ◽  
Vol 67 (7) ◽  
pp. 521
Author(s):  
Magdalena Vaio ◽  
Cristina Mazzella ◽  
Marcelo Guerra ◽  
Pablo Speranza
Keyword(s):  
Evolutionary Dynamics ◽  
In Situ Hybridisation ◽  
5S Rdna ◽  
Its Region ◽  
Variable Number ◽  
Rrna Genes ◽  
Fluorescence In Situ Hybridisation ◽  
Rdna Sites ◽  
35S Rdna ◽  
Genome Restructuring

The Dilatata group of Paspalum includes species and biotypes native to temperate South America. Among them, five sexual allotetraploids (x = 10) share the same IIJJ genome formula: P. urvillei Steud, P. dasypleurum Kunze ex Desv., P. dilatatum subsp. flavescens Roseng., B.R. Arrill. & Izag., and two biotypes P. dilatatum Vacaria and P. dilatatum Virasoro. Previous studies suggested P. intermedium Munro ex Morong & Britton and P. juergensii Hack. or related species as their putative progenitors and donors of the I and J genome, respectively, and pointed to a narrow genetic base for their maternal origin. It has not yet been established whether the various members of the Dilatata group are the result of a single or of multiple allopolyploid formations. Here, we aimed to study the evolutionary dynamics of rRNA genes after allopolyploidisation in the Dilatata group of Paspalum and shed some light into the genome restructuring of the tetraploid taxa with the same genome formula. We used double target fluorescence in situ hybridisation of 35S and 5S rDNA probes and sequenced the nrDNA internal transcribed spacer (ITS) region. A variable number of loci at the chromosome ends were observed for the 35S rDNA, from 2 to 6, suggesting gain and loss of sites. For the 5S rDNA, only one centromeric pair of signals was observed, indicating a remarkable loss after polyploidisation. All ITS sequences generated were near identical to the one found for P. intermedium. Although sequences showed a directional homogeneisation towards the putative paternal progenitor in all tetraploid species, the observed differences in the number and loss of rDNA sites suggest independent ongoing diploidisation processes in all taxa and genome restructuring following polyploidy.

scholarly journals The role of chromosomal fusion in the karyotypic evolution of the genus Ageneiosus (Siluriformes: Auchenipteridae)

2013 ◽  
Vol 11 (2) ◽  
pp. 327-334 ◽  
Author(s):  
Roberto Laridondo Lui ◽  
Daniel Rodrigues Blanco ◽  
Juliana de Fatima Martinez ◽  
Vladimir Pavan Margarido ◽  
Paulo Cesar Venere ◽  
...  
Keyword(s):  
Chromosome Pair ◽  
5S Rdna ◽  
Proximal Region ◽  
Terminal Region ◽  
Metacentric Chromosome ◽  
South American ◽  
Submetacentric Chromosome ◽  
Araguaia River ◽  
The Family ◽  
Preferential Location

Ageneiosus is the most widely distributed genus of the family Auchenipteridae among South American river basins. Although chromosome studies in the family are scarce, this genus has the largest number of analyzed species, with 2n = 54 to 56 chromosomes, differing from the rest of the family (2n = 58). This study aimed to analyze Ageneiosus inermis from the Araguaia River basin. The diploid number found was of 56 chromosomes. Heterochromatin was allocated in terminal region of most chromosomes, plus a pericentromeric heterochromatic block in pair 1, a pair distinguished by size in relation to other chromosomes pairs. AgNORs were detected in only one submetacentric chromosome pair, which was confirmed by FISH. 5S rDNA was present in only one metacentric chromosome pair. Hybridization with [TTAGGG]n sequence marked the telomeres of all chromosomes, in addition to an ITS in the proximal region of the short arm of pair 1. The repetitive [GATA]n sequence was dispersed, with preferential location in terminal region of the chromosomes. Ageneiosus has a genomic organization somewhat different when compared to other Auchenipteridae species. Evidences indicate that a chromosomal fusion originated the first metacentric chromosome pair in A. inermis, rearrangement which may be a basal event for the genus

Gene mapping of 5S rDNA sites in eight fish species from the Paraíba do Sul river basin, Brazil

2004 ◽  
Vol 106 (1) ◽  
pp. 107-110 ◽  
Author(s):  
K.F. Kavalco ◽  
R. Pazza ◽  
L.A.C. Bertollo ◽  
O. Moreira-Filho
Keyword(s):  
Gene Mapping ◽  
River Basin ◽  
Fish Species ◽  
5S Rdna ◽  
Rdna Sites ◽  
Paraíba Do Sul River

scholarly journals A preliminary list of the Herpetofauna from termite mounds of the cerrado in the Upper Tocantins river valley

2009 ◽  
Vol 49 (15) ◽  
pp. 183-189 ◽  
Author(s):  
Lorena A. Moreira ◽  
Danté B. Fenolio ◽  
Hélder Lúcio Rodrigues Silva ◽  
Nelson Jorge da Silva Jr
Keyword(s):  
Power Plants ◽  
River Basins ◽  
River Valley ◽  
Hydroelectric Power ◽  
Termite Mounds ◽  
Squamate Reptiles ◽  
Araguaia River ◽  
Hydroelectric Power Plants ◽  
Tocantins River

Termite mounds are known to offer refuge and microhabitats to a great variety of invertebrates and vertebrates. In the valley of the upper Tocantins River, within areas of influence of hydroelectric power plants 4,000 termite mounds were surveyed to evaluate the diversity of amphibians and reptiles using these environments. Surveys in termite mounds from two other areas (Corumbá River and Araguaia River basins) were used for comparative purposes. The results for termitaria in the upper Tocantins river valley revealed nine families, 13 genera, and 25 species of amphibians, and 16 families, 32 genera, and 47 species of squamate reptiles. Compared to a general herpetofaunal list of the region, the data indicate that between 30.6% and 56.8% of the species use termitaria.

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