scholarly journals Radical Reactions in the Gas Phase: Recent Development and Application in Biomolecules

2014 ◽  
Vol 2014 ◽  
pp. 1-10 ◽  
Author(s):  
Yang Gao ◽  
Jiexun Bu ◽  
Zhou Peng ◽  
Biwei Yang

This review summarizes recent literature describing the use of gas phase radical reactions for structural characterization of complex biomolecules other than peptides. Specifically, chemical derivatization, in-source chemical reaction, and gas phase ion/ion reactions have been demonstrated as effective ways to generate radical precursor ions that yield structural informative fragments complementary to those from conventional collision-induced dissociation (CID). Radical driven dissociation has been applied to a variety of biomolecules including peptides, nucleic acids, carbohydrates, and phospholipids. The majority of the molecules discussed in this review see limited fragmentation from conventional CID, and the gas phase radical reactions open up completely new dissociation channels for these molecules and therefore yield high fidelity confirmation of the structures of the target molecules. Due to the extensively studied peptide fragmentation, this review focuses only on nonpeptide biomolecules such as nucleic acids, carbohydrates, and phospholipids.

2019 ◽  
Vol 25 (1) ◽  
pp. 30-43 ◽  
Author(s):  
Qiuyan Jin ◽  
Jiaye Li ◽  
Alireza Ariafard ◽  
Allan J Canty ◽  
Richard AJ O’Hair

Gas-phase ion trap mass spectrometry experiments and density functional theory calculations have been used to examine the routes to the formation of the 1,8-naphthyridine (napy) ligated geminally dimetallated phenyl complexes [(napy)Cu2(Ph)]+, [(napy)Ag2(Ph)]+ and [(napy)CuAg(Ph)]+ via extrusion of CO2 or SO2 under collision-induced dissociation conditions from their corresponding precursor complexes [(napy)Cu2(O2CPh)]+, [(napy)Ag2(O2CPh)]+, [(napy)CuAg(O2CPh)]+ and [(napy)Cu2(O2SPh)]+, [(napy)Ag2(O2SPh)]+, [(napy)CuAg(O2SPh)]+. Desulfination was found to be more facile than decarboxylation. Density functional theory calculations reveal that extrusion proceeds via two transition states: TS1 enables isomerization of the O, O-bridged benzoate to its O-bound form; TS2 involves extrusion of CO2 or SO2 with the concomitant formation of the organometallic cation and has the highest barrier. Of all the organometallic cations, only [(napy)Cu2(Ph)]+ reacts with water via hydrolysis to give [(napy)Cu2(OH)]+, consistent with density functional theory calculations which show that hydrolysis proceeds via the initial formation of the adduct [(napy)Cu2(Ph)(H2O)]+ which then proceeds via TS3 in which the coordinated H2O is deprotonated by the coordinated phenyl anion to give the product complex [(napy)Cu2(OH)(C6H6)]+, which then loses benzene.


Talanta ◽  
2019 ◽  
Vol 195 ◽  
pp. 17-22 ◽  
Author(s):  
Muyi He ◽  
You Jiang ◽  
Xiaofeng Wang ◽  
Yue Zhao ◽  
Sijian Ye ◽  
...  

2013 ◽  
Vol 25 (1) ◽  
pp. 48-56 ◽  
Author(s):  
Ziqing Lin ◽  
Lei Tan ◽  
Sandilya Garimella ◽  
Linfan Li ◽  
Tsung-Chi Chen ◽  
...  
Keyword(s):  

Langmuir ◽  
2008 ◽  
Vol 24 (16) ◽  
pp. 8483-8490 ◽  
Author(s):  
D-H. Tsai ◽  
R. A. Zangmeister ◽  
L. F. Pease III ◽  
M. J. Tarlov ◽  
M. R. Zachariah

2021 ◽  
Author(s):  
Khadouja Harouaka ◽  
Caleb Allen ◽  
Kali Melby ◽  
Eric Bylaska ◽  
Richard Cox ◽  
...  

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