scholarly journals The Histochemical Characterization of the Glycoconjugates in the Epidermal Mucous Cells of the Red Californian Earthworm, Eisenia foetida

2014 ◽  
Vol 2014 ◽  
pp. 1-6 ◽  
Author(s):  
Kenan Çinar ◽  
Mustafa Öztop ◽  
Emel Demirbağ
Keyword(s):  
Regional Distribution ◽  
Distribution Patterns ◽  
Histochemical Staining ◽  
Slight Reduction ◽  
Eisenia Foetida ◽  
Mucous Cells ◽  
Functional Roles ◽  
Comprehensive Information ◽  
Reaction Intensity

The aim of this study was to characterize the nature and regional distribution of the glycoconjugates secreted by epidermal mucous cells in Eisenia foetida (Annelida). Specimens were divided into six regions from anterior to posterior. The histochemistry was carried out by using standard histochemical methods. Histochemical staining properties of glycoconjugates in epidermal mucous cells were determined regionally. The epidermis of all regions contained strong to stronger PAS (+) cells in various degrees. The epidermis of the first, fourth, fifth, and sixth regions had strong to stronger AB pH 2.5 (+) cells. On the contrary, all regions contained weak to moderate AB pH 0.5 and AB pH 1.0 (+) cells. Most of mucous cells in epidermis of the first region contained both PAS (+) and AB (+) mucosubstances. All regions included weaker to weak AF (+) cells. All regions featured KOH/PAS (+) cells, with a slight reduction in reaction intensity in the epidermis of the last three regions. In this context, the different staining patterns observed in epidermal mucous cells hinted at their functional roles with respect to production of mucus with different physical properties. This study provided comprehensive information about the regional distribution patterns of the glycoconjugates and an opportunity to compare their distributional patterns in other annelids.

Prevalence and distribution of different diarrhoeagenicEscherichia colivirulotypes in major water bodies in Bangladesh

2013 ◽  
Vol 141 (12) ◽  
pp. 2516-2525 ◽  
Author(s):  
S. AKTER ◽  
M. ISLAM ◽  
K. S. AFREEN ◽  
N. AZMUDA ◽  
S. I. KHAN ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Regional Distribution ◽  
Distribution Patterns ◽  
Aquatic Systems ◽  
Water Bodies ◽  
Virulence Determinants ◽  
Waterborne Pathogen ◽  
E Coli ◽  
Enriched Cultures ◽  
Natural Water Bodies

SUMMARYEscherichia coli, a prominent waterborne pathogen, causes a variety of gastrointestinal and extraintestinal infections that depend on virulence determinants. To monitor natural aquatic systems for virulence-associated genes ofE. coli, multiplex PCR was used in a survey covering 46 major natural water bodies in Bangladesh. DNA was extracted directly from water samples as well as from pre-enriched and enriched cultures during three successive seasons and assessed forE. colivirulotype distribution. From the five virulotypes, genes from the enterotoxigenic (ETEC), enteropathogenic (EPEC), and enterohaemorrhagic (EHEC) virulotypes were detected consistently, but genes from the enteroinvasive (EIEC) and enteroaggregative (EAEC) virulotypes were traced only occasionally. ETEC was the most prevalent virulotype, followed by EPEC. However, EIEC and EAEC virulotypes could not be detected in winter or the rainy season, respectively. Specific regional distribution patterns of differentE. colivirulotypes and their temporal fluctuations were identified. These observations may assist with assessing seasonal risk and identifying vulnerable areas of the country prone toE. coli-associated outbreaks.

scholarly journals Characterization of Each St and Y Genome Chromosome of Roegneria grandis Based on Newly Developed FISH Markers

2021 ◽  
pp. 213-222
Author(s):  
Dandan Wu ◽  
Xiaoxia Zhu ◽  
Lu Tan ◽  
Haiqin Zhang ◽  
Lina Sha ◽  
...  
Keyword(s):  
Structural Changes ◽  
Distribution Patterns ◽  
Proximal Region ◽  
Genome Chromosome ◽  
High Affinity ◽  
Complete Set ◽  
Genome Analyses ◽  
First Time ◽  
Homoeologous Chromosomes

The genera of the tribe Triticeae (family Poaceae), constituting many economically important plants with abundant genetic resources, carry genomes such as St, H, P, and Y. The genome symbol of <i>Roegneria</i> C. Koch (Triticeae) is StY. The St and Y genomes are crucial in Triticeae, and tetraploid StY species participate extensively in polyploid speciation. Characterization of St and Y nonhomologous chromosomes in StY-genome species could help understand variation in the chromosome structure and differentiation of StY-containing species. However, the high genetic affinity between St and Y genome and the deficiency of a complete set of StY nonhomologous probes limit the identification of St and Y genomes and variation of chromosome structures among <i>Roegneria</i> species. We aimed to identify St- and Y-enhanced repeat clusters and to study whether homoeologous chromosomes between St and Y genomes could be accurately identified due to high affinity. We employed comparative genome analyses to identify St- and Y-enhanced repeat clusters and generated a FISH-based karyotype of <i>R. grandis</i> (Keng), one of the taxonomically controversial StY species, for the first time. We explored 4 novel repeat clusters (StY_34, StY_107, StY_90, and StY_93), which could specifically identify individual St and Y nonhomologous chromosomes. The clusters StY_107 and StY_90 could identify St and Y addition/substitution chromosomes against common wheat genetic backgrounds. The chromosomes V_St, VII_St, I_Y, V_Y, and VII_Y displayed similar probe distribution patterns in the proximal region, indicating that the high affinity between St and Y genome might result from chromosome rearrangements or transposable element insertion among V_St/Y, VII_St/Y, and I_Y chromosomes during allopolyploidization. Our results can be used to employ FISH further to uncover the precise karyotype based on colinearity of Triticeae species by using the wheat karyotype as reference, to analyze diverse populations of the same species to understand the intraspecific structural changes, and to generate the karyotype of different StY-containing species to understand the interspecific chromosome variation.

scholarly journals Vineyard ecosystems are structured and distinguished by fungal communities impacting the flavour and quality of wine

2019 ◽  
Author(s):  
Di Liu ◽  
Qinglin Chen ◽  
Pangzhen Zhang ◽  
Deli Chen ◽  
Kate S. Howell
Keyword(s):  
Regional Distribution ◽  
Distribution Patterns ◽  
Wine Fermentation ◽  
Fungal Communities ◽  
Soil Microbiome ◽  
Soil Conditions ◽  
Wine Aroma ◽  
Wine Production ◽  
Microbial Distribution

AbstractThe flavours of foods and beverages are formed by the agricultural environment where the plants are grown. In the case of wine, the location and environmental features of the vineyard site imprint the wine with distinctive aromas and flavours. Microbial growth and metabolism play an integral role in wine production from the vineyard to the winery, by influencing grapevine health, wine fermentation, and the flavour, aroma and quality of finished wines. The mechanism by which microbial distribution patterns drive wine metabolites is unclear and while flavour has been correlated with bacterial composition for red wines, bacterial activity provides a minor biochemical conversion in wine fermentation. Here, we collected samples across six distinct winegrowing areas in southern Australia to investigate regional distribution patterns of both fungi and bacteria and how this corresponds with wine aroma compounds. Results show that soil and must microbiota distinguish winegrowing regions and are related to wine chemical profiles. We found a strong relationship between microbial and wine metabolic profiles, and this relationship was maintained despite differing abiotic drivers (soil properties and weather/ climatic measures). Notably, fungal communities played the principal role in shaping wine aroma profiles and regional distinctiveness. We found that the soil microbiome is a potential source of grape- and must-associated fungi, and therefore the weather and soil conditions could influence the wine characteristics via shaping the soil fungal community compositions. Our study describes a comprehensive scenario of wine microbial biogeography in which microbial diversity responds to surrounding environments and ultimately sculpts wine aromatic characteristics. These findings provide perspectives for thoughtful human practices to optimise food and beverage flavour and composition through understanding of fungal activity and abundance.

scholarly journals Study of the Influence of Shielding Gases on Laser Metal Deposition of Inconel 718 Superalloy

Materials ◽  
2018 ◽  
Vol 11 (8) ◽  
pp. 1388 ◽  
Author(s):  
Jose Ruiz ◽  
Magdalena Cortina ◽  
Jon Arrizubieta ◽  
Aitzol Lamikiz
Keyword(s):  
Metal Deposition ◽  
Slight Reduction ◽  
Laser Metal Deposition ◽  
Melt Pool ◽  
Industrial Sectors ◽  
Inconel 718 Superalloy ◽  
Melt Pool Temperature ◽  
Different Gases ◽  
Die And Mold

The use of the Laser Metal Deposition (LMD) technology as a manufacturing and repairing technique in industrial sectors like the die and mold and aerospace is increasing within the last decades. Research carried out in the field of LMD process situates argon as the most usual inert gas, followed by nitrogen. Some leading companies have started to use helium and argon as carrier and shielding gas, respectively. There is therefore a pressing need to know how the use of different gases may affect the LMD process due there being a lack of knowledge with regard to gas mixtures. The aim of the present work is to evaluate the influence of a mixture of argon and helium on the LMD process by analyzing single tracks of deposited material. For this purpose, special attention is paid to the melt pool temperature, as well as to the characterization of the deposited clads. The increment of helium concentration in the gases of the LMD processes based on argon will have three effects. The first one is a slight reduction of the height of the clads. Second, an increase of the temperature of the melt pool. Last, smaller wet angles are obtained for higher helium concentrations.

Purification and characterization of a new serine protease (EF-SP2) with anti-plant viral activity from Eisenia foetida: Analysis of anti-plant viral activity of EF-SP2

2011 ◽  
Vol 46 (9) ◽  
pp. 1711-1716 ◽  
Author(s):  
Mitsuhiro Ueda ◽  
Takayuki Yamashita ◽  
Masami Nakazawa ◽  
Kazutaka Miyatake ◽  
Satoshi Ohki ◽  
...  
Keyword(s):  
Serine Protease ◽  
Eisenia Foetida ◽  
Purification And Characterization ◽  
Viral Activity

scholarly journals Identification and Characterization of Carnitine Palmitoyltransferase 1 (cpt 1) Genes in Nile Tilapia, Oreochromis niloticus

2020 ◽  
Vol 16 ◽  
pp. 117693432091325
Author(s):  
Mehtap Bayır ◽  
Gökhan Arslan ◽  
Abdulkadir Bayır
Keyword(s):  
Nile Tilapia ◽  
Transcriptional Control ◽  
Genome Duplication ◽  
Transmembrane Helix ◽  
Distribution Patterns ◽  
Nile Tilapia Oreochromis Niloticus ◽  
Conserved Gene ◽  
Carnitine Palmitoyltransferase 1 ◽  
Identification And Characterization

Four cpt 1 genes ( cpt 1α1a, cpt 1α2a, cpt 1α2b, and cpt 1β) were identified in the Nile tilapia genome. Two transmembrane helix domains (TMH) were identified for Cpt 1α1a, Cpt 1α2a, and Cpt 1β, while Cpt 1α2b had only one TMH domain. Evidence was found of conserved gene synteny between cpt 1 genes from Nile tilapia and the cpt 1/CPT 1 genes of zebrafish and human. Phylogenetic analysis showed that Nile tilapia Cpt 1 sequences clustered in distinct clades with their orthologous Cpt 1/CPT 1 from other vertebrates. Nile tilapia cpt 1α1a, cpt 1α2a, cpt 1α2b, and cpt 1β contain 18 coding exons encoding polypeptides of 771, 784, 788, and 786 amino acids in length, respectively. The cpt 1 genes were determined in all the tested tissues with varying tissue distribution patterns. These findings suggest that (1) cpt 1α1a, cpt 1α2a, and cpt 1α2b arose in the Nile tilapia genome as a result of the teleost-specific whole-genome duplication; (2) nonfunctionalization is the most likely cause of the loss of cpt 1α1b in the Nile tilapia genome; (3) the different tissue-specific transcription of cpt 1α2a and cpt 1α2b may be either due to the sub- or the neo-functionalization of transcriptional control side.

scholarly journals Preparation and Characterization of Quinoxaline-Pyrene-Based Conjugated Copolymers for Organic Photovoltaic Devices

Coatings ◽  
2020 ◽  
Vol 10 (11) ◽  
pp. 1098
Author(s):  
Bakhet A. Alqurashy ◽  
Bader M. Altayeb ◽  
Sulaiman Y. Alfaifi ◽  
Majed Alawad ◽  
Ahmed Iraqi ◽  
...  
Keyword(s):  
Molecular Orbital ◽  
Powder Diffraction ◽  
Bulk Heterojunction ◽  
Gel Permeation Chromatography ◽  
Band Gap Energy ◽  
Slight Reduction ◽  
X Ray ◽  
Highest Occupied Molecular Orbital ◽  
Lowest Unoccupied Molecular Orbital

In this study, two novel conjugated polymers, poly(4,5,9,10-tetrakis((2-ethylhexyl)oxy]pyrene-alt-2,3-bis(3-(octyloxy)phenyl)-5,8-di(2-thienyl)-6,7-difluoroquinoxaline) (PPyQxff) and poly(4,5,9,10-tetrakis((2-ethylhexyl)oxy)pyren-alt-2,3-bis(3-(octyloxy)phenyl)-5,8-di(2-thienyl)quinoxaline) (PPyQx), consisting of quinoxaline units with and without fluorine substituents, as electron-accepting moieties and pyrene flanked with dithienyl units as electron-donating moieties were prepared via Stille polymerization reactions for use as electron donor materials in bulk heterojunction (BHJ) solar cells. PPyQxff and PPyQx were characterized by X-ray powder diffraction (XRD), gel permeation chromatography (GPC), thermogravimetric analysis (TGA), cyclic voltammetry (CV), UV−VIS absorption, and nuclear magnetic resonance (NMR) spectroscopy. PPyQxff and PPyQx revealed excellent solution processability in common organic solvents. PPyQxff and PPyQx presented decomposition temperatures above 300 °C. The inclusion of F atoms to the quinoxaline moiety made a slight reduction in the highest occupied molecular orbital (HOMO) level, relative to the unfluorinated polymer, but had no impact on the lowest unoccupied molecular orbital (LUMO) level. PPyQxff and PPyQx exhibited similar physical properties with strong and broad absorbance from 400 to 700 nm and an optical band-gap energy of 1.77 eV. The X-ray powder diffraction study indicated that PPyQxff possessed a reduced π–π stacking distance relative to PPyQx.

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