scholarly journals Polymorphism and Balancing Selection of MHC Class II DAB Gene in 7 Selective Flounder (Paralichthys olivaceus) Families

2011 ◽  
Vol 2011 ◽  
pp. 1-10 ◽  
Author(s):  
Min Du ◽  
Song-lin Chen ◽  
You Liang ◽  
Lei Wang ◽  
Feng-tao Gao ◽  
...  

In order to determine the genetic variation of the MHC class IIB exon2 allele in the offspring, 700 fry from seven families of Japanese flounder challenged withV. anguillarumwere studied, and different mortality rates were found in those families. Five to ten surviving and dead fry from each of the seven families were selected to study the MHC class II B exon2 gene with PCR and a direct sequencing method. One hundred and sixteen different exon2 sequences were found and 116 different alleles were identified, while a minimum of four loci were revealed in the MHC class II B exon2 gene. The ratio (dN/dS) of nonsynonymous substitution (dN) to synonymous substitutions (dS) in the peptide-binding region (PBR) of the MHC class IIB gene was 6.234, which indicated that balancing selection is acting on the MHC class IIB genes. The MHC IIB alleles were thus being passed on to their progeny. Some alleles were significantly more frequent in surviving than dead individuals. All together our data suggested that the allelesPaol-DAB*4301,Paol-DAB*4601,Paol-DAB*4302,Paol-DAB*3803, andPaol-DAB*4101were associated with resistance toV. anguillarumin flounder.

Genetica ◽  
2009 ◽  
Vol 138 (2) ◽  
pp. 265-271 ◽  
Author(s):  
John A. Eimes ◽  
Jennifer L. Bollmer ◽  
Peter O. Dunn ◽  
Linda A. Whittingham ◽  
Charles Wimpee

1992 ◽  
Vol 19 (3) ◽  
pp. 127-129
Author(s):  
T.H. Eiermann ◽  
M. Ballas ◽  
J. Fakler ◽  
C. Müller ◽  
A. Wölpl ◽  
...  

Nature ◽  
1988 ◽  
Vol 336 (6198) ◽  
pp. 471-473 ◽  
Author(s):  
H. Robson MacDonald ◽  
Rosemary K. Lees ◽  
Reto Schneider ◽  
Rolf M. Zinkernagel ◽  
Hans Hengartner

1993 ◽  
Vol 178 (6) ◽  
pp. 2173-2183 ◽  
Author(s):  
P Marrack ◽  
L Ignatowicz ◽  
J W Kappler ◽  
J Boymel ◽  
J H Freed

In the past we and others have suggested that positive selection of developing thymocytes may depend upon interaction between the alpha beta receptors on these cells and major histocompatibility complex (MHC) proteins bound to peptides found uniquely in the selecting tissue, thymus cortical epithelium. To test this hypothesis, peptides were isolated from MHC class II proteins of spleen, thymus cortical plus medullary epithelium, or thymus cortical epithelium alone. The results showed that the major peptides bound to class II on thymus cortical epithelium were also associated with spleen class II. Some peptides could only be detected in isolates from spleen, probably because of differences in the distribution or uptake of the donor proteins between spleen and thymus. Thus, although we found some tissue-specific distribution of self-peptides, our data suggest that there are no fundamental differences among these tissues in the occupancy of class II MHC by self-peptides. These results limit hypotheses which depend on a specialized mechanism of peptide generation and/or MHC class II loading to account for the positive selection of T cells on thymic cortical epithelium.


1997 ◽  
Vol 56 ◽  
pp. 236
Author(s):  
H. Kropshofer ◽  
A.B. Vogt ◽  
G. Moldenhauer ◽  
O. Arndt ◽  
G.J. Hämmerling

2021 ◽  
Vol 55 (4) ◽  
pp. 151-161
Author(s):  
Osamu Kurata ◽  
Suyu Miyashita ◽  
Shusei Toda ◽  
Shinpei Wada ◽  
Takamitsu Sakai

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