scholarly journals pH-, temperature- and ion-dependent oligomerization ofSulfolobus solfataricusrecombinant amidase: a study with site-specific mutants

Archaea ◽  
2009 ◽  
Vol 2 (4) ◽  
pp. 221-231 ◽  
Author(s):  
Laura Politi ◽  
Emilia Chiancone ◽  
Laura Giangiacomo ◽  
Laura Cervoni ◽  
Anna Scotto d’abusco ◽  
...  
Keyword(s):  
Protein Conformation ◽  
Sulfolobus Solfataricus ◽  
Terminal Segment ◽  
Site Specific ◽  
Factors Affecting ◽  
Amino Terminal ◽  
Ph And Temperature Sensitivity ◽  
Selection For ◽  
Decreasing Ph ◽  
Helical Region

Recombinant amidase fromSulfolobus solfataricusoccurred as a dimer of 110 kDa comprising identical subunits. Only dimers were present at pHs above 7.0, but with decreasing pH, dimers associated into octamers, with complete oligomerization occurring at pH 3.0. Oligomerization showed reversible temperature-dependence, with octamer formation increasing with temperature from 36 °C to between 70 and 80° C. Increasing salt concentrations, favored dissociation of the octamers. Among the three investigated factors affecting the dimer–octamer equilibrium, the most important was pH. Among four mutants obtained by site-specific mutagenesis and selection for pH and temperature sensitivity, the T319I and D487N mutant amidases, like that of the nativeSulfolobus solfataricus, responded to changes in pH and temperature with a conformational change affecting the dimer–octamer equilibrium. The Y41C and L34P mutant amidases were unaffected by pH and temperature, remaining always in the dimeric state. The differences among mutants in protein conformation must be related to the position of the introduced mutation. Although the L34P and Y41C mutations are located in the helical region 33–48 (LLKLQLESYERLDSLP), which is close to the amino-terminal segment of the protein, the T319I mutation is located in a strand on the surface of the protein, which is far from, and opposite to, the amino-terminal segment. The D487N mutation is located in the center of the protein, far distant from the 33–48 segment. These observations suggest that the segment of the protein closest to the amino-terminus plays a key role in the association of dimers into octamers.

Factors affecting the hydrogen cyanide potential of forage sorghum.

1990 ◽  
Vol 41 (6) ◽  
pp. 1093 ◽  
Author(s):  
JL Wheeler ◽  
C Mulcahy ◽  
JJ Walcott ◽  
GG Rapp
Keyword(s):  
Water Stress ◽  
Light Intensity ◽  
Hydrogen Cyanide ◽  
Dry Matter ◽  
Early Stage ◽  
Phosphorus Fertilizer ◽  
Factors Affecting ◽  
Forage Sorghum ◽  
Plant Maturity ◽  
Selection For

The effect of seven factors, namely genotype, plant maturity, nitrogen fertilizer, phosphorus fertilizer, water stress, light intensity and temperature, on the hydrogen cyanide potential (HCNp) of forage sorghum was studied in three pot experiments. Fivefold differences occurred between genotypes in HCNp, with a breeder's line, X45106, selected for low HCNp having a maximum of 520 mg HCN kg-1 DM (dry matter) compared with 2300 and 2450 mg kg-1 DM for cvs Zulu and Silk respectively. In X45 106, HCNp (mg HCN kg-1 DM) declined curvilinearly with age d (days from sowing) (HCNp=8460- 320d+ 3.1d2) and linearly in Silk (HCNp = 9020 - 110d), but the decline in Zulu was not statistically significant. Nitrogen (equivalent to 200 kg ha-1 of N) increased HCN, (P< 0.001), but more so in full light (100 mg kg-1 compared with 1430 mg kg-1) than in 50% shade (190 mg kg-1 compared with 690 mg kg-1). In one experiment, acute water stress appeared to reduce HCNp, but this was confounded with the strong decline due to aging. In another study, acute water stress had no effect on HCNp. Neither the application of superphosphate nor change in light intensity, nor change in temperature had a direct significant effect on HCNp in these studies. Breeding and selection for low HCNp appears a promising approach to ensuring that sorghum plants will provide non-toxic forage from an early stage of growth.

Vital statistics for an experimental flock of Merino sheep. III. Factors affecting wool and body characteristics, including the effect of age of ewe and its possible interaction with method of selection

1966 ◽  
Vol 17 (4) ◽  
pp. 557 ◽  
Author(s):  
GH Brown ◽  
HN Turner ◽  
SSY Young ◽  
CHS Dolling
Keyword(s):  
Body Weight ◽  
Fibre Diameter ◽  
Vital Statistics ◽  
Fibre Volume ◽  
Age Changes ◽  
Factors Affecting ◽  
Fibre Number ◽  
The Mean ◽  
Selection For ◽  
Staple Length

Estimates were made of the effects of the following factors on 10 fleece and body characteristics measured on breeding ewes aged 1½ to 10½ years in three mating groups over a period of 15 years: age of ewe, single or twin birth, age of dam, the ewe's own lambing performance, the year in which measurements were made, and the year in which each set of ewes was born. Two groups (S and MS) were under selection for high clean wool weight at 15–16 months, with a ceiling on wrinkle score and fibre diameter, while the third (C) was a random control. Changes with age were present in all characteristics and were similar in the three groups. The finding that selection on wool weight at an early age had no effect on subsequent age changes in any characteristic is of considerable importance. Greasy and clean wool weight reached a maximum at 34 years, then declined by 0.3–0.2 1b per year. Percentage clean yield, fibre diameter, body weight, and wrinkle score had maxima at 5½ to 6½ years. Staple length fell consistently by approximately 0.2 cm per year, while face cover rose consistently but slightly. Crimp number rose, fell, and rose again, while fibre number rose, fell, and remained constant from 4½ years. The chief source of increase in wool weight from l½ to 3½ years was an increase in the total number of fibres. The chief source of the subsequent fall was a decrease in fibre volume, with a minor contribution from a fall in total fibre number after 6½ years. Twin-born ewes cut 0.21 lb (4.2% of the mean) less clean wool per year over their lifetime than single-born ewes, while the progeny of 2-year-old ewes cut 0.32 lb (6.4%) less than the progeny of adults. The main source of lower weight in each case was a lower total fibre number. Pregnancy lowered clean wool weight more than lactation, the separate effects being 0.87 and 0.38 lb respectively (17.4 and 7.7% of the mean) and the combined effect 1.25 1b or 25.1%. Pregnancy lowered total fibre number but lactation had no further effect. Mean clean wool weights over all ages in the C group varied from year to year, the range being from 1.08 lb (21.6%)below the mean to 0.97 lb (19.4%) above. Differences in total fibre number contributed between one-third and two-thirds of the variation. Ewes born in consecutive years in the S and MS groups showed marked upward trends in clean wool weight, fibre number, and staple length, with a marked downward trend in crimp number and a slight upward trend in body weight. These trends demonstrate direct and correlated responses to the strong selection for high clean wool weight at 15–16 months of age, and the associated slight selection against fibre diameter and wrinkle score. The mean annual increases in clean wool weight were 0.15 and 0.11 Ib (3.0 and 2.2%) in the S and MS groups, approximately 40% of the increase arising from increased total fibre number and 40% from increased staple length. The effects of age and lambing performance can be used to predict productivity in flocks of differing age structures. As the casting age rises to 54 years changes in productivity are negligible. With a rise in casting age to 7½ years the average clean wool weight of the flock would fall by 0.14 lb, with a slight decrease in staple length and crimp number. These changes need to be balanced against any increased lambing percentage or decreased annual genetic gain due to increased generation interval. Comparison with other available figures indicates that age changes may vary from one area to another.

scholarly journals Photoproduction of nitric oxide in seawater

Ocean Science ◽  
2020 ◽  
Vol 16 (1) ◽  
pp. 135-148 ◽  
Author(s):  
Ye Tian ◽  
Gui-Peng Yang ◽  
Chun-Ying Liu ◽  
Pei-Feng Li ◽  
Hong-Tao Chen ◽  
...  
Keyword(s):  
Nitric Oxide ◽  
North Pacific Ocean ◽  
Artificial Seawater ◽  
Natural Seawater ◽  
Factors Affecting ◽  
Decreasing Ph ◽  
Seawater Samples ◽  
Major Factors ◽  
Increasing Temperature ◽  
Increasing Trends

Abstract. Nitric oxide (NO) is a short-lived intermediate of the oceanic nitrogen cycle. However, our knowledge about its production and consumption pathways in oceanic environments is rudimentary. In order to decipher the major factors affecting NO photochemical production, we irradiated several artificial seawater samples as well as 31 natural surface seawater samples in laboratory experiments. The seawater samples were collected during a cruise to the western tropical North Pacific Ocean (WTNP, a N–S section from 36 to 2∘ N along 146 to 143∘ E with 6 and 12 stations, respectively, and a W–E section from 137 to 161∘ E along the Equator with 13 stations) from November 2015 to January 2016. NO photoproduction rates from dissolved nitrite in artificial seawater showed increasing trends with decreasing pH, increasing temperature, and increasing salinity. In contrast, NO photoproduction rates (average: 0.5±0.2×10-12 mol L−1 s−1) in the natural seawater samples from the WTNP did not show any correlations with pH, water temperature, salinity, or dissolved inorganic nitrite concentrations. The flux induced by NO photoproduction in the WTNP (average: 13×10-12 mol m−2 s−1) was significantly larger than the NO air–sea flux density (average: 1.8×10-12 mol m−2 s−1), indicating a further NO loss process in the surface layer.

Atrazine Dissipation as Affected by Surface pH and Tillage

Weed Science ◽  
1980 ◽  
Vol 28 (1) ◽  
pp. 101-104 ◽  
Author(s):  
J. J. Kells ◽  
C. E. Rieck ◽  
R. L. Blevins ◽  
W. M. Muir
Keyword(s):  
Weed Control ◽  
Soil Ph ◽  
Field Studies ◽  
Conventional Tillage ◽  
Field Conditions ◽  
No Tillage ◽  
Tillage Systems ◽  
Surface Ph ◽  
Factors Affecting ◽  
Decreasing Ph

Field studies and laboratory analyses were conducted to examine factors affecting degradation of14C-atrazine [2-chloro-4-(ethylamine)-6-(isopropylamino)-s-triazine] under field conditions. The effects of these factors on weed control under no-tillage and conventional tillage systems were also examined. The amount of radioactivity which was unextractable in 90% methanol increased with time following treatment with14C-atrazine. The rate of formation of unextractable14C compounds was greater under no-tillage and increased with decreasing pH. After 14 to 18 days, a greater amount of extractable atrazine was present in areas receiving lime. The degradation of atrazine occurred more rapidly when surface pH was less than 5.0 compared with a pH greater than 6.5. The effect of lime on the amount of parent atrazine present in the soil was directly correlated to its effect on soil pH. Extractable atrazine in the soil 45 days after treatment was significantly correlated with weed control with the greatest effect under no-tillage.

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