A biosystematic study of the Carduus nutans complex in Canada

1988 ◽  
Vol 66 (8) ◽  
pp. 1621-1631 ◽  
Author(s):  
A. M. Desrochers ◽  
J. F. Bain ◽  
S. I. Warwick

The Carduus nutans L. complex in North America has been treated either as one species with four subspecies (ssp. nutans, ssp. leiophyllus (Petrovic) Stoj. & Stef., ssp. macrolepis (Peterm.) Kazmi, and ssp. macrocephalus (Desf.) Nyman) or as three species: Carduus nutans with two subspecies (ssp. nutans and ssp. macrolepis), C. thoermeri Weinm., and C. macrocephalus Desf. A biosystematic study of this complex, including morphological, flavonoid, and isozyme analyses, of 19 populations, was conducted to clarify the taxonomy of this complex in Canada. Both the morphological and flavonoid analyses clearly indicate the existence of only two closely related groups of taxa referable to ssp. nutans and ssp. leiophyllus. The classificatory discriminant analysis indicated correct classification rates of individuals of 93.6% and 96.0% for ssp. nutans and ssp. leiophyllus, respectively. Each taxon has a distinct flavonoid profile. Given the high mean genetic identity value (ī = 0.93) between the two taxa in the complex, and the estimates of genetic variability obtained, the taxa are best treated at the subspecific level, as ssp. nutans and ssp. leiophyllus.

Animals ◽  
2021 ◽  
Vol 11 (3) ◽  
pp. 721
Author(s):  
Krzysztof Adamczyk ◽  
Wilhelm Grzesiak ◽  
Daniel Zaborski

The aim of the present study was to verify whether artificial neural networks (ANN) may be an effective tool for predicting the culling reasons in cows based on routinely collected first-lactation records. Data on Holstein-Friesian cows culled in Poland between 2017 and 2018 were used in the present study. A general discriminant analysis (GDA) was applied as a reference method for ANN. Considering all predictive performance measures, ANN were the most effective in predicting the culling of cows due to old age (99.76–99.88% of correctly classified cases). In addition, a very high correct classification rate (99.24–99.98%) was obtained for culling the animals due to reproductive problems. It is significant because infertility is one of the conditions that are the most difficult to eliminate in dairy herds. The correct classification rate for individual culling reasons obtained with GDA (0.00–97.63%) was, in general, lower than that for multilayer perceptrons (MLP). The obtained results indicated that, in order to effectively predict the previously mentioned culling reasons, the following first-lactation parameters should be used: calving age, calving difficulty, and the characteristics of the lactation curve based on Wood’s model parameters.


Molecules ◽  
2020 ◽  
Vol 25 (18) ◽  
pp. 4080
Author(s):  
Milena Bučar Miklavčič ◽  
Fouad Taous ◽  
Vasilij Valenčič ◽  
Tibari Elghali ◽  
Maja Podgornik ◽  
...  

In this work, fatty-acid profiles, including trans fatty acids, in combination with chemometric tools, were applied as a determinant of purity (i.e., adulteration) and provenance (i.e., geographical origin) of cosmetic grade argan oil collected from different regions of Morocco in 2017. The fatty acid profiles obtained by gas chromatography (GC) showed that oleic acid (C18:1) is the most abundant fatty acid, followed by linoleic acid (C18:2) and palmitic acid (C16:0). The content of trans-oleic and trans-linoleic isomers was between 0.02% and 0.03%, while trans-linolenic isomers were between 0.06% and 0.09%. Discriminant analysis (DA) and orthogonal projection to latent structure—discriminant analysis (OPLS-DA) were performed to discriminate between argan oils from Essaouira, Taroudant, Tiznit, Chtouka-Aït Baha and Sidi Ifni. The correct classification rate was highest for argan oil from the Chtouka-Aït Baha province (90.0%) and the lowest for oils from the Sidi Ifni province (14.3%), with an overall correct classification rate of 51.6%. Pairwise comparison using OPLS-DA could predictably differentiate (≥0.92) between the geographical regions with the levels of stearic (C18:0) and arachidic (C20:0) fatty acids accounting for most of the variance. This study shows the feasibility of implementing authenticity criteria for argan oils by including limit values for trans-fatty acids and the ability to discern provenance using fatty acid profiling.


1991 ◽  
Vol 65 (2) ◽  
pp. 200-212 ◽  
Author(s):  
Marcus M. Key

The Bromide Formation of the Middle Ordovician Simpson Group of Oklahoma contains one of the oldest diverse bryozoan faunas in North America. The early divergence of many trepostome clades is revealed in these rocks. Three trepostome bryozoan species belonging to family Halloporidae are described from this fauna. Discriminant analysis is used to define the following halloporid species: Diplotrypa schindeli n. sp., Tarphophragma karklinsi n. sp., and Tarphophragma macrostoma (Loeblich). Preliminary cladistic analysis indicates that the family Halloporidae was already a distinct lineage by the Middle Ordovician. This suggests that by this time, many of the major trepostome clades were already established.


1996 ◽  
Vol 44 (4) ◽  
pp. 367 ◽  
Author(s):  
JI Menzies

A program of multi-variate discriminant analysis is used to separate approximately 900 specimens, currently identified as species of the genus Melomys, into significantly different taxa at generic, specific and subspecific level. A combination of metric characters and multistate characters is used to indicate phenetic relationships between the taxa previously identified. Metric characters are used in combination with multistate characters to provide diagnoses of genera, and species and subspecies within genera. As a result, Melomys is redefined to include only four species, rufescens, leucogaster, lutillus and frigicola, in New Guinea. Nine species are included in Paramelomys, raised from its previous subgeneric rank. Two species formerly included in Melomys (lanosus and rattoides) are removed to a new genus. Melomys fellowsi is removed to another new genus. Some comments on the generic disposition of extralimital species are made.


2005 ◽  
Vol 85 (2) ◽  
pp. 481-506 ◽  
Author(s):  
Mihai Costea ◽  
François J. Tardif

A review and assessment of biological information as well as personal data are provided for Polygonum aviculare in Canada. The species has been revised taxonomically and the six subspecies that occur in Canada are presented. Three of the subspecies, P. aviculare subsp. aviculare, P. aviculare subsp. neglectum and P. aviculare subsp. depressum are weeds introduced to Canada from Europe. A fourth subspecies, P. aviculare subsp. buxiforme is apparently native to North America. The geographical distribution of the latter four subspecies is very wide. Plants exhibit a high phenotypic plasticity and genetic variability, and they easily adapt to a multitude of agrestal and ruderal habitats. The seeds have a variable dormancy and polymorphic germination as a result of heterocarpy, genetic and environmental factors. In other areas (Europe), the species has developed resistance to triazines. Plants are hosts to nematodes, viruses, and fungi that also affect cultivated plants. Key words: POLAV, ecology, distribution, taxonomy


Author(s):  
Rosa M Mariz Perez ◽  
M Teresa Garcia Alvarez

In this paper, we pretend to identify the existing differences between contractual conditions fixed by franchisors of Spanish chains. With this objective, we analyze the two basic types of existing franchised chains those that commercialize services and those others that distribute products- and if contractual stipulations and other characteristics differ in a systematic manner between them. In this sense, we have considered a series of independent variables such as size, age, initial fee, royalties or contractual initial duration. After undergoing the descriptive analysis of these variables for our sample -440 Spanish franchised chains- we have divided the latter into two groups based on the type of chain- in order to detect significant differences between them. For this aim, we have conducted a discriminant analysis to discover which of the independent variables taken into account contribute, in a significant manner, to a correct classification of chains to their corresponding group service or product chains.


2008 ◽  
Vol 62 (10) ◽  
pp. 1115-1123 ◽  
Author(s):  
Siobhán Hennessy ◽  
Gerard Downey ◽  
Colm O'Donnell

Fourier transform infrared (FT-IR) spectroscopy and chemometrics were used to verify the origin of honey samples ( n = 150) from Europe and South America. Authentic honey samples were collected from five sources, namely unfiltered samples from Mexico in 2004, commercially filtered samples from Ireland and Argentina in 2004, commercially filtered samples from the Czech Republic in 2005 and 2006, and commercially filtered samples from Hungary in 2006. Samples were diluted with distilled water to a standard solids content (70° Brix) and their spectra (2500–12 500 nm) recorded at room temperature using an FT-IR spectrometer equipped with a germanium attenuated total reflection (ATR) accessory. First- and second-derivative and standard normal variate (SNV) data pretreatments were applied to the recorded spectra, which were analyzed using partial least squares (PLS) regression analysis, factorial discriminant analysis (FDA), and soft independent modeling of class analogy (SIMCA). In general, when an attenuated wavelength range (6800–11 500 nm) rather than the whole spectrum (2500–12 500 nm) was studied, higher correct classification rates were achieved. An overall correct classification of 93.3% was obtained for honeys by PLS discriminant analysis, while FDA techniques correctly classified 94.7% of honey samples. Correct classifications of up to 100% were achieved using SIMCA, but models describing some classes had very high false positive rates.


Blood ◽  
2005 ◽  
Vol 106 (11) ◽  
pp. 1463-1463
Author(s):  
Georges Jung ◽  
Sylvie Thiebault ◽  
Jean-Claude Eisenmann ◽  
Eckart Wunder ◽  
Marie Haas ◽  
...  

Abstract Multivariate analysis classification of chronic lymphocytic leukemia (CLL) and lymphoma (non-CLL) disorders is investigated in 299 patients by an extended panel of surface markers, and compared with Matutes classical scoring proposal. Diagnosis was based on clinical features, cell morphology, node or bone marrow histology, and immunological scoring system. Results are obtained on directly labeled tumoral cells by flow cytometry gating. Patients included 154 CLL, 2 Richter transformation, and 143 lymphoma (26 follicular, 49 lymphocytic, 18 other low-grade, 7 Waldenström macroglobulinemia, 13 mantel, 11 diffuse large-cell, 6 Burkitt, 4 marginal zone-cell, 5 hairy-cell leukemia, 2 MALT, 1 prolymphocytic leukemia, 1 SLVL). For CD43, FMC7, CD23, CD5, CD79b (% stained cells) and CD20, CD22 surface antigen intensities Chi-Square values indicate very high probability of correct classification (varing from 621 to 94.9; p<0.0000). If, alternatively, % of CD22, CD20, CD19 and intensities of CD79b, CD5, CD19, CD43, CD23 and kappa/lamba chains are employed, Chi-Square yields values of lower significance (varing from 65 to 0.1; p<0.0000 to 0.6573). Using classical panel scoring with CD79b, 82.4 % of patients were correctly classified, compared to 84.5% after replacing CD79b by CD22 intensity. If CD43 is added, correct classification increased to 89.6% and 88.1% of patients, respectively; this improvement is due to better allocation of CLL. In discriminant analysis 91.3% of patients are correctly classified with the panel including CD79b, and 90.9% with CD22 intensity. CD43 enhances the allocation of either one to 94.3%. Using our previous discriminant analysis with CD79b (Jung G, et al. Br J Haematol.2003; 120:496–499), this blind analysis correctly classified the population in 87.1%, compared to 91.3% with the new one. By adding CD43, it moved from 92.4% up to 94.3%. In order to find the optimal combination of the selected best markers, a stepwise probit discrimination was performed. Using CD43 and FMC7 yields a correct classification of 90.3%; after addition of CD5, CD79b, CD23, and CD22 intensity, efficiency increased to 94.6%. Further added markers don’t improve classification. Efficiency of this panel was further confirmed by hierarchical cluster and principal components analysis. Cluster analysis with squared Euclidian distances separated CLL from non-CLL patients with low overlaps: 86.6% of cases are correctly identified. Separated points in the plot representing patients with CLL and non-CLL, obtained by principal components analysis of surface markers, confirm the high predictive potential of this panel. The same analysis of surface marker positions for non-CLL suggests use of: % of CD79b, FMC7, and CD22 intensity, and for CLL: % of CD5, CD23, CD43. So, the addition of CD43 improves as well the discriminant function as the scoring system. Our selected panel of best markers is useful in distinguishing CLL from non-CLL and offers a better distinction by discriminant analysis. Furthermore quantitative expression of each marker and its predictive value improve diagnosis and classification.


Molecules ◽  
2018 ◽  
Vol 23 (11) ◽  
pp. 3013 ◽  
Author(s):  
Jian Zhang ◽  
Ruidong Yang ◽  
Rong Chen ◽  
Yuncong Li ◽  
Yishu Peng ◽  
...  

This study aimed to construct objective and accurate geographical discriminant models for tea leaves based on multielement concentrations in combination with chemometrics tools. Forty mineral elements in 87 tea samples from three growing regions in Guizhou Province (China), namely Meitan and Fenggang (MTFG), Anshun (AS) and Leishan (LS) were analyzed. Chemometrics evaluations were conducted using a one-way analysis of variance (ANOVA), principal component analysis (PCA), linear discriminant analysis (LDA), and orthogonal partial least squares discriminant analysis (OPLS-DA). The results showed that the concentrations of the 28 elements were significantly different among the three regions (p < 0.05). The correct classification rates for the 87 tea samples were 98.9% for LDA and 100% for OPLS-DA. The variable importance in the projection (VIP) values ranged between 1.01–1.73 for 11 elements (Sb, Pb, K, As, S, Bi, U, P, Ca, Na, and Cr), which can be used as important indicators for geographical origin identification of tea samples. In conclusion, multielement analysis coupled with chemometrics can be useful for geographical origin identification of tea leaves.


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