scholarly journals Temperature limits to deep subseafloor life in the Nankai Trough subduction zone

Science ◽  
2020 ◽  
Vol 370 (6521) ◽  
pp. 1230-1234
Author(s):  
Verena B. Heuer ◽  
Fumio Inagaki ◽  
Yuki Morono ◽  
Yusuke Kubo ◽  
Arthur J. Spivack ◽  
...  

Microorganisms in marine subsurface sediments substantially contribute to global biomass. Sediments warmer than 40°C account for roughly half the marine sediment volume, but the processes mediated by microbial populations in these hard-to-access environments are poorly understood. We investigated microbial life in up to 1.2-kilometer-deep and up to 120°C hot sediments in the Nankai Trough subduction zone. Above 45°C, concentrations of vegetative cells drop two orders of magnitude and endospores become more than 6000 times more abundant than vegetative cells. Methane is biologically produced and oxidized until sediments reach 80° to 85°C. In 100° to 120°C sediments, isotopic evidence and increased cell concentrations demonstrate the activity of acetate-degrading hyperthermophiles. Above 45°C, populated zones alternate with zones up to 192 meters thick where microbes were undetectable.

2020 ◽  
Author(s):  
Male Köster ◽  
Hayley R. Manners ◽  
Verena B. Heuer ◽  
Yuki Morono ◽  
Fumio Inagaki ◽  
...  

<p>The deep subseafloor biosphere represents one of the Earth’s largest, but also least understood ecosystems with diverse species and mostly uncharacterized microbial communities. International Ocean Discovery Program (IODP) Expedition 370 (Temperature Limit of the Deep Biosphere off Muroto) established Site C0023 down to 1180 mbsf in the Nankai Trough off Japan to explore the upper temperature limit of microbial life in the deep sedimentary biosphere [1]. Site C0023 is characterized by a complex lithostratigraphic and depositional history with strongly changing sedimentation rates. Volcanic ash layers are ubiquitous in all lithological units. However, the highest abundance of ash layers could be observed between 400 and 700 mbsf. Previous studies have shown that volcanic ashes represent hotspots for microbial life [2] and are commonly characterized by high Fe(III) and Mn(IV) contents [3]. Onboard measurements show a release of dissolved Fe in the depth interval associated with the highest abundance of ash layers [1]. Therefore, we hypothesized that the release is related to microbial Fe reduction fueled by the mineralogy of the volcanic ash. In order to identify the source and reaction pathway of the liberated Fe, we applied sequential extractions of differently reactive Fe oxide pools on mud rock and ash layer samples as well as stable iron isotope (δ<sup>56</sup>Fe) analyses on pore-water and solid-phase samples. Microbial Fe reduction leads to Fe isotope fractionation with an enrichment of light isotopes in the released Fe and a respective enrichment of heavy isotopes in the residual ferric substrate. Therefore, the δ<sup>56</sup>Fe signals of different reactive Fe pools and the pore water are used to identify the pools actually involved in microbial respiration processes. Our results show that the total Fe content in mud rock of Site C0023 is relatively constant at ~4.2 wt%. Reactive Fe oxides represent 25% of the total Fe. The bulk Fe content in the ash layers varies between 1.4 and 6.8 wt%. Surprisingly, most ash samples contain less total Fe (3.35 wt% on average) compared to the surrounding mud rock. Similarly, the contents of the reactive Fe oxides are significantly lower. This indicates that either (1) ash layers do not represent the energy substrate for microbial Fe reduction, or (2) reactive Fe in ash samples has already been used up by microbes. The bulk Fe content in recent volcanic material from an active volcano on the Japanese island arc is ~4.4 wt% [4]. The higher Fe content in fresh volcanic material compared to ash samples at Site C0023 might suggest that reactive Fe in ash layers is already reduced. Alternatively, the dissolved Fe release might be related to microbial reduction of structural Fe(III) in smectite promoting the smectite-to-illite transition, which has previously been proposed for Site C0023 [5].</p><p>References:<br>[1] Heuer, V.B. et al., 2017. In <em>Proc. IODP Volume 370</em>.<br>[2] Inagaki, F. et al., 2003. <em>AEM</em> 69: 7224-7235.<br>[3] Torres, M.E. et al., 2015. <em>Geobiology</em> 13: 562-580.<br>[4] Vogel, A. et al., 2017. <em>J. Geophys. Res. Atmos</em>. 122: 9485-9514.<br>[5] Kim, J. et al., 2019. <em>Geology</em> 47: 535-539.</p>


2013 ◽  
Vol 589 ◽  
pp. 90-102 ◽  
Author(s):  
Yojiro Yamamoto ◽  
Koichiro Obana ◽  
Tsutomu Takahashi ◽  
Ayako Nakanishi ◽  
Shuichi Kodaira ◽  
...  

2001 ◽  
Vol 33 ◽  
pp. 304-310 ◽  
Author(s):  
Karen Junge ◽  
Christopher Krembs ◽  
Jody Deming ◽  
Aaron Stierle ◽  
Hajo Eicken

AbstractMicrobial populations and activity within sea ice have been well described based on bulk measurements from melted sea-ice samples. However, melting destroys the micro-environments within the ice matrix and does not allow for examination of microbial populations at a spatial scale relevant to the organism. Here, we describe the development of a new method allowing for microscopic observations of bacteria localized within the three-dimensional network of brine inclusions in sea ice under in situ conditions. Conventional bacterial staining procedures, using the DNA-specific fluorescent stain DAPI, epifluorescence microscopy and image analysis, were adapted to examine bacteria and their associations with various surfaces within microtomed sections of sea ice at temperatures from −2° to −15°C. The utility and sensitivity of the method were demonstrated by analyzing artificial sea-ice preparations of decimal dilutions of a known bacterial culture. When applied to natural, particle-rich sea ice, the method allowed distinction between bacteria and particles at high magnification. At lower magnifications, observations of bacteria could be combined with those of other organisms and with morphology and particle content of the pore space. The method described here may ultimately aid in discerning constraints on microbial life at extremely low temperatures.


2020 ◽  
Vol 11 (1) ◽  
Author(s):  
Yuki Morono ◽  
Motoo Ito ◽  
Tatsuhiko Hoshino ◽  
Takeshi Terada ◽  
Tomoyuki Hori ◽  
...  

2014 ◽  
Vol 15 (6) ◽  
pp. 2180-2194 ◽  
Author(s):  
Thomas Pape ◽  
Patrizia Geprägs ◽  
Sebastian Hammerschmidt ◽  
Paul Wintersteller ◽  
Jiangong Wei ◽  
...  

1977 ◽  
Vol 23 (11) ◽  
pp. 1594-1597 ◽  
Author(s):  
Douglas E. Caldwell

The in vivo fluorescence of the primary accessory pigments in purple bacteria (carotenoids), green bacteria (bacteriochlorophyll), green algae (chlorophyll), and cyanobacteria (phycocyanin) was found to be a linear function of cell concentration over three to four orders of magnitude. The lowest cell concentrations detectable were 104 cells/ml for procaryotes and 103 cells/ml for eucaryotes.


1970 ◽  
Vol 16 (8) ◽  
pp. 677-680 ◽  
Author(s):  
S. M. Saleh ◽  
R. F. Harris ◽  
O. N. Allen

Bacillus thuringiensis spores germinated, grew, and sporulated in soils of neutral pH amended with alfalfa or casein. Numbers of viable spores of B. thuringiensis increased 100-fold and more than one million spores/g soil were maintained throughout a 3-month incubation period. B. thuringiensis spores apparently germinated but the resulting vegetative cells did not survive in acid soils amended with alfalfa or casein. It appears that B. thuringiensis spores can remain viable for long periods of time in soil and that the organism can compete successfully under conditions favoring the bacillus component of soil microbial populations.


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