Delimitating cryptic species in theGracilaria domingensiscomplex (Gracilariaceae, Rhodophyta) using molecular and morphological data

2016 ◽  
Vol 52 (6) ◽  
pp. 997-1017 ◽  
Author(s):  
Goia de M. Lyra ◽  
C. Frederico D. Gurgel ◽  
Emmanuelle da S. Costa ◽  
Priscila B. de Jesus ◽  
Mariana C. Oliveira ◽  
...  
Keyword(s):  
Cryptic Species ◽  
Morphological Data

scholarly journals Flatfoot in Africa, the cirripede Chthamalus in the west Indian Ocean

PeerJ ◽  
2021 ◽  
Vol 9 ◽  
pp. e11710
Author(s):  
Noa Simon-Blecher ◽  
Avi Jacob ◽  
Oren Levy ◽  
Lior Appelbaum ◽  
Shiran Elbaz-Ifrah ◽  
...  
Keyword(s):  
Indian Ocean ◽  
Cryptic Species ◽  
Morphological Characteristics ◽  
West Indian ◽  
Western Indian Ocean ◽  
Rocky Intertidal ◽  
Morphological Data ◽  
The West ◽  
African Species ◽  
West Indian Ocean

Barnacles of the genus Chthamalus are commonly encountered rocky intertidal shores. The phylogeography of the different species in the Western Indian Ocean is unclear. Using morphological characteristics as well as the molecular markers mitochondrial cytochrome oxygenase subunit I (COI) and the nuclear sodium-potassium ATPase (NaKA), we identified four clades representing four species in the Western Indian Ocean and its adjacent seas. Among these species, a newly identified species, Chthamalus barilani, which was found in Madagascar, Zanzibar and Tanzania. Chthamalus from the coasts of Tanzania and Zanzibar is identified morphologically as C. malayensis, and clusters with C. malayensis from the Western Pacific and the Indo Malayan regions. C. malayensis is regarded as a group of four genetically differentiated clades representing four cryptic species. The newly identified African clade is genetically different from these clades and the pairwise distances between them justify the conclusion that it is an additional cryptic species of C. malayensis. This type of genetic analyses offers an advantage over morphological characterization and allowed us to reveal that another species, C. barnesi, which is known from the Red Sea, is also distributed in the Arabian Sea and the Persian Gulf. We could also confirm the presence of the South African species C. dentatus in the Mozambique channel. This represents the Northeastern limit of C. dentatus, which is usually distributed along the coast of southern Africa up to the Islands of Cape Verde in West Africa. Altogether, based on a combination of morphology and genetics, we distinct between four clusters of Chthamalus, and designate their distribution in the West Indian Ocean. These distinctions do not agree with the traditional four groups reported previously based merely on morphological data. Furthermore, these findings underline the importance of a combining morphological and genetics tools for constructing barnacle taxonomy.

scholarly journals First records of the fanged frogs Limnonectes bannaensis Ye, Fei & Jiang, 2007 and L. utara Matsui, Belabut & Ahmad, 2014 (Amphibia: Anura: Dicroglossidae) in Thailand

2021 ◽  
Vol 9 ◽  
Author(s):  
Chatmongkon Suwannapoom ◽  
Ke Jiang ◽  
Yun-He Wu ◽  
Parinya Pawangkhanant ◽  
Sengvilay Lorphengsy ◽  
...  
Keyword(s):  
Cryptic Species ◽  
Species Complex ◽  
Sequence Data ◽  
Taxonomic Status ◽  
Morphological Data ◽  
Integrative Approach ◽  
Species Identity ◽  
Dna Sequence Data ◽  
Species Complexes ◽  
Cryptic Species Complex

The taxonomic status of the Thai populations belonging to the Limnonectes kuhlii species complex is controversial, due to phenotypic similarity in the cryptic species complex. Recently, some studies on this group in Thailand have discovered four new species: L. taylori, L. megastomias, L. jarujini and L. isanensis. Even so, the diversity of this group is still incomplete. Based on an integrative approach encompassing genetic and morphological analyses, we conclude that the Limnonectes populations from Nan Province (northern) and Yala Province (southern) of Thailand are conspecific with L. bannaensis Ye, Fei & Jiang, 2007 and L. utara Matsui, Belabut & Ahmad, 2014, respectively. These are the first records of these species in Thailand. Our study highlights the importance of using DNA sequence data in combination with morphological data to accurately document species identity and diversity. This is especially important for morphologically cryptic species complexes and sympatrically occurring congeners.

scholarly journals Molecular and morphological data reveal three new cryptic species ofChiasmocleis(Mehely 1904) (Anura, Microhylidae) endemic to the Atlantic Forest, Brazil

PeerJ ◽  
2017 ◽  
Vol 5 ◽  
pp. e3005 ◽  
Author(s):  
Mauricio C. Forlani ◽  
João F.R. Tonini ◽  
Carlos A.G. Cruz ◽  
Hussam Zaher ◽  
Rafael O. de Sá
Keyword(s):  
New Species ◽  
Cryptic Species ◽  
Atlantic Forest ◽  
Morphological Characters ◽  
Molecular Data ◽  
Sao Paulo ◽  
Morphological Data ◽  
Congeneric Species ◽  
The Third ◽  
Coloration Patterns

Three new cryptic species ofChiasmocleisfrom the Atlantic Forest of Brazil are described. Two of these species occur in the northeastern states of Sergipe and Bahia, whereas the third species is found in the southeastern state of São Paulo. The new species can be distinguished from other congeneric species by the molecular data, as evidenced in the phylogeny, and by a combination of morphological characters including: size, foot webbing, dermal spines, and coloration patterns.Chiasmocleisspecies differ in osteological traits, therefore we also provide an osteological description of each new species and comparsions with data reported for other species in the genus.

scholarly journals A morphometric assessment of species boundaries in a widespread anole lizard (Squamata: Dactyloidae)

2020 ◽  
Vol 130 (4) ◽  
pp. 813-825
Author(s):  
Tanner C Myers ◽  
Pietro L H de Mello ◽  
Richard E Glor
Keyword(s):  
Cryptic Species ◽  
Model Fitting ◽  
Taxonomic Revision ◽  
Genetic Data ◽  
Morphological Data ◽  
Species Boundaries ◽  
Morphometric Data ◽  
Normal Mixture ◽  
Test Species ◽  
Candidate Species

Abstract Cryptic species – genetically distinct species that are morphologically difficult to distinguish – present challenges to systematists. Operationally, cryptic species are very difficult to identify and sole use of genetic data or morphological data can fail to recognize evolutionarily isolated lineages. We use morphometric data to test species boundaries hypothesized with genetic data in the North Caribbean bark anole (Anolis distichus), a suspected species complex. We use univariate and multivariate analyses to test if candidate species based on genetic data can be accurately diagnosed. We also test alternative species delimitation scenarios with a model fitting approach that evaluates normal mixture models capable of identifying morphological clusters. Our analyses reject the hypothesis that the candidate species are diagnosable. Neither uni- nor multivariate morphometric data distinguish candidate species. The best-supported model included two morphological clusters; however, these clusters were uneven and did not align with a plausible species divergence scenario. After removing two related traits driving this result, only one cluster was supported. Despite substantial differentiation revealed by genetic data, we recover no new evidence to delimit species and refrain from taxonomic revision. This study highlights the importance of considering other types of data along with molecular data when delimiting species.

Remarkable sexual dimorphism, rarity and cryptic species: a revision of the ‘aegrota species group’ of the Neotropical butterfly genus Caeruleuptychia with the description of three new species (Lepidoptera, Nymphalidae, Satyrinae)

2018 ◽  
Vol 49 (2) ◽  
pp. 130-182 ◽  
Author(s):  
Shinichi Nakahara ◽  
Thamara Zacca ◽  
Blanca Huertas ◽  
Andrew F. E. Neild ◽  
Jason P. W. Hall ◽  
...  
Keyword(s):  
New Species ◽  
Sexual Dimorphism ◽  
Cryptic Species ◽  
Molecular Data ◽  
Species Group ◽  
Morphological Data ◽  
Phylogenetic Hypothesis ◽  
Morphological And Molecular Data ◽  
Three New Species ◽  
First Time

The ‘aegrota species group’ of the Neotropical nymphalid genus Caeruleuptychia Forster, 1964, in addition to three other superficially similar, enigmatic species in the genus, are revised. A lectotype is designated for Euptychia aegrota Butler, 1867, E. aetherialis Butler, 1877 stat. rev., E. helios Weymer, 1911 and E. pilata Butler, 1867, and C. aetherialis is resurrected from its synonymy with C. aegrota. Caeruleuptychia helios caelestissima Brévignon, 2010, syn. nov., and Magneuptychia keltoumae Brévignon & Benmesbah, 2012, syn. nov. are both regarded as junior subjective synonyms of C. helios (Weymer, 1911), as a result of the discovery and first illustration of the female of this taxon. The female of C. aegrota is also described and illustrated for the first time, and three new species, C. trembathi Willmott, Nakahara, Hall & Neild, sp. nov., C. scripta Nakahara, Zacca & Huertas, sp. nov., and C. maryzenderae Lamas & Nakahara, sp. nov. are described and named. We analyze morphological and molecular data separately, in addition to combining morphological data with molecular data, to provide the first phylogenetic hypothesis for the taxa treated in this revision.

Cryptic species diversity and character congruence: review of the tribe Anthracini (Diptera : Bombyliidae) in Australia

1998 ◽  
Vol 12 (6) ◽  
pp. 977 ◽  
Author(s):  
David K. Yeates ◽  
Christine L. Lambkin
Keyword(s):  
New Species ◽  
Cryptic Species ◽  
Cladistic Analysis ◽  
Morphological Characters ◽  
Species Group ◽  
Morphological Data ◽  
Distribution Maps ◽  
Eastern Australia ◽  
Wing Patterns ◽  
Species Groups

The Australian Anthracini are revised. In all, 28 new species are described, bringing the total fauna to 34 species. The previously described species of Anthrax Scopoli – A. maculatus Macquart, A. incomptus Walker, A. confluensisRoberts, A. lepidiotus Roberts and A. proconcisus Hardy – are diagnosed and the following eight new species of Anthrax are described: A. argentia, A. asciculus, A. clinatus, A. crenatus, A. dolabratus, A. funestus, A. opacus and A. torulus. This taxonomic study reveals a group of at least 20 cryptic species previously included in collections under the name Anthrax angularis Thomson. A new genus, Thraxan, is erected to contain this cryptic group of species and the following 20 new species are described: T. acutus, T. abditus, T. caligneus, T. cinctus, T. cornuatus, T. depressus, T. echinatus, T. ebenus, T. emicatus, T. hamulus, T. luteus, T. misatulus, T. nodus, T. norrisi, T. obstipus, T. patielus, T. planus, T. prolatus, T. simulatusand T. spiculus. Many of these cryptic species have been collected sympatrically, hill topping together in eastern Australia. A key is provided to the species of Anthrax and Thraxan, genitalia drawings are presented for most species and distribution maps of all species are presented. A cladistic analysis of the species of Anthrax and Thraxan is also presented. A total of 26 of the species is compared for 125 synapomorphies in 39 adult morphological characters. Three species-groups were found: Thraxan, and two species-groups within Anthrax, the A. proconcisus species-group and the A. maculatusspecies-group. Previous authors divided Anthrax into species-groups on the basis of wing patterns, but found that these species-groups were not confirmed when other characters were taken into consideration. We studied the congruence of seven different character sets within the clade comprising Anthrax and Thraxan – antennae, venation, wing patterns, vestiture, genitalia, male genitalia and female genitalia – using several incongruence indices. Significance of incongruence was measured using a randomisation procedure. Results of these studies indicate that the wing-pattern character set is significantly incongruent with the other morphological data. These quantitative cladistic results explain the difficulty previous authors experienced in finding suites of characters to support species-groups in Anthrax on the basis of wing patterns. A relationship is found between the level of incongruence and the distance over which mate-recognition signals operate.

scholarly journals A new cryptic species of ground-dwelling Hemidactylus (Squamata: Gekkonidae) from southern India

2018 ◽  
Vol 17 (2) ◽  
pp. 169-180 ◽  
Author(s):  
Zeeshan A. Mirza
Keyword(s):  
New Species ◽  
Cryptic Species ◽  
Species Complex ◽  
Molecular Data ◽  
Southern India ◽  
Morphological Data ◽  
Mitochondrial Cytochrome B ◽  
Karnataka State ◽  
Mitochondrial Cytochrome B Gene ◽  
A New Species

A new cryptic species of ground-dwelling Hemidactylus (Squamata: Gekkonidae) from southern India. Recently collected specimens of a gecko resembling Hemidactylus reticulatus from northern Karnataka State in southwestern India led me to investigate variation in the species with regards to its morphology and molecular divergence. Results based on existing museum material, combined with molecular data for the mitochondrial cytochrome b gene support the presence of cryptic species within the broadly distributed H. reticulatus complex. Here, I describe a new species of Hemidactylus from northern Karnataka as the frst contribution in resolving the species complex. The integration of molecular and morphological data supports the distinctness of the new species described herein.

scholarly journals Systematics and distribution of ferret badgers Melogale (Mammalia, Mustelidae) in Vietnam: first genetic data

2019 ◽  
Vol 485 (4) ◽  
pp. 523-528
Author(s):  
V. V. Rozhnov ◽  
M. P. Korablev ◽  
A. V. Abramov
Keyword(s):  
Cryptic Species ◽  
Sibling Species ◽  
Genetic Data ◽  
Morphological Data ◽  
Genetic Studies ◽  
Sympatric Distribution ◽  
Southern Vietnam ◽  
Central Vietnam

Genetic studies of the ferret badgers Melogale conducted in Vietnam have shown that this area is inhabited by three species, M. moschata, M. personata, and M. cucphuongensis, which can be attributed to sibling species (cryptic species). M. personata was found to be widespread not only in southern and central Vietnam, but also in the northern provinces (Lang Son, Ha Giang, Ninh Binh), while M. cucphuongensis was found in the provinces Lang Son, Ha Giang, Cao Bang, and Dak Lak, apart from Ninh Binh, from where it was described. The data obtained suggest a sympatric distribution of all three species over the Vietnam area and confirm sympatry of M. personata and M. moschata in southern Vietnam, which has been earlier established on the basis of morphological data.

scholarly journals New cryptic species of the ‘revolutum’ group of Echinostoma (Digenea: Echinostomatidae) revealed by molecular and morphological data

2013 ◽  
Vol 6 (1) ◽  
pp. 64 ◽  
Author(s):  
Simona Georgieva ◽  
Christian Selbach ◽  
Anna Faltýnková ◽  
Miroslava Soldánová ◽  
Bernd Sures ◽  
...  
Keyword(s):  
Cryptic Species ◽  
Morphological Data
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