A novel 12-bp indel polymorphism within the GDF9 gene is significantly associated with litter size and growth traits in goats

2017 ◽  
Vol 48 (6) ◽  
pp. 735-736 ◽  
Author(s):  
Xinyu Wang ◽  
Qing Yang ◽  
Ke Wang ◽  
Sihuan Zhang ◽  
Chuanying Pan ◽  
...  
Keyword(s):  
Litter Size ◽  
Growth Traits ◽  
Indel Polymorphism ◽  
Gdf9 Gene

scholarly journals Polymorphism Detection of GDF9 Gene and Its Association with Litter Size in Luzhong Mutton Sheep (Ovis aries)

Animals ◽  
2021 ◽  
Vol 11 (2) ◽  
pp. 571
Author(s):  
Fengyan Wang ◽  
Mingxing Chu ◽  
Linxiang Pan ◽  
Xiangyu Wang ◽  
Xiaoyun He ◽  
...  
Keyword(s):  
Litter Size ◽  
Tertiary Structure ◽  
Novel Mutation ◽  
Major Gene ◽  
Ovis Aries ◽  
Nucleotide Polymorphisms ◽  
Economic Traits ◽  
Coding Region ◽  
Association Analyses ◽  
Gdf9 Gene

Litter size is one of the most important economic traits in sheep. GDF9 and BMPR1B are major genes affecting the litter size of sheep. In this study, the whole coding region of GDF9 was sequenced and all the SNPs (single nucleotide polymorphisms) were determined in Luzhong mutton ewes. The FecB mutation was genotyped using the Sequenom MassARRAY®SNP assay technology. Then, the association analyses between polymorphic loci of GDF9 gene, FecB, and litter size were performed using a general linear model procedure. The results showed that eight SNPs were detected in GDF9 of Luzhong mutton sheep, including one novel mutation (g.41769606 T > G). The g.41768501A > G, g.41768485 G > A in GDF9 and FecB were significantly associated with litter size in Luzhong mutton ewes. The g.41768485 G > A is a missense mutation in the mature GDF9 protein region and is predicted to affect the tertiary structure of the protein. The results preliminarily demonstrated that GDF9 was a major gene affecting the fecundity of Luzhong mutton sheep and the two loci g.41768501A > G and g.41768485 G > A may be potential genetic markers for improving litter size.

scholarly journals A 20-bp insertion/deletion (indel) polymorphism within the <i>CDC25A</i> gene and its associations with growth traits in goat

2019 ◽  
Vol 62 (1) ◽  
pp. 353-360 ◽  
Author(s):  
Wenbo Cui ◽  
Nuan Liu ◽  
Xuelian Zhang ◽  
Yanghai Zhang ◽  
Lei Qu ◽  
...  
Keyword(s):  
Cell Cycle ◽  
Cell Division ◽  
Growth And Development ◽  
Marker Assisted Selection ◽  
Growth Traits ◽  
S Phase ◽  
Cashmere Goat ◽  
Indel Polymorphism ◽  
Candidate Marker ◽  
Essential Function

Abstract. Cell division cycle 25A (CDC25A), a member of the CDC25 family of phosphatases, is required for progression from G1 to the S phase of the cell cycle. CDC25A provides an essential function during early embryonic development in mice, suggesting that it plays an important role in growth and development. In this study, we used mathematical expectation (ME) methods to identify a 20-bp insertion/deletion (indel) polymorphism of CDC25A gene in Shaanbei White Cashmere (SBWC) goats. We also investigated the association between this 20-bp indel and growth-related traits in SBWC goats. Association results showed that the indel was related to growth traits (height at hip cross, cannon circumference, and cannon circumference index) in SBWC goats. The height at hip cross of individuals with insertion/insertion (II) genotype was higher than those with insertion/deletion (ID) genotype (P=0.02); on the contrary, the cannon circumference and cannon circumference index of individuals with ID genotype were superior when compared with those with II genotype (P=0.017 and P=0.009). These findings suggest that the 20-bp indel in the CDC25A gene significantly affects growth-related traits, and could be utilized as a candidate marker for marker-assisted selection (MAS) in the cashmere goat industry.

scholarly journals Association of gdf9 Gene Polymorphisms With Litter Size in Indigenous Sheep of Bangladesh

2020 ◽  
Vol 7 (2) ◽  
pp. 283-292
Author(s):  
Faruk Hossain ◽  
Sharmin Akter Suma ◽  
Mohammad Shamsul Alam Bhuiyan
Keyword(s):  
Gene Polymorphism ◽  
Litter Size ◽  
Gene Polymorphisms ◽  
Climatic Conditions ◽  
Animal Protein ◽  
Selection Program ◽  
Indigenous Sheep ◽  
Gdf9 Gene

Sheep in Bangladesh are well known as efficient users of low quality roughages, welladapted to hot and humid agro-climatic conditions, capable of bi-annual lambing withmultiple births and resistant to common prevalent diseases. They play an important role inthe supply of animal protein. Present study aimed to investigate possible association ofGDF9 gene polymorphisms with litter size. A total of 126 DNA samples extracted from theblood of indigenous sheep from 5 locations namely Tangail, Noakhali, Naogaon,Gaibandha and Satkhira with known litter size were used to study the association ofGDF9 polymorphism by PCR based RFLP method. Two polymorphic regions of GDF9(FecG1 and FecG8) were amplified by PCR, digested with respective restriction enzymesand 126 sheep were genotyped. Current study revealed that genotype and allelefrequency for FecG1 varied among the sheep from different locations. The genotype (GG,AG, AA) frequency were 51.59%, 45.24% and 3.17% and the allele (G and A) frequenciesin the overall population were 74.21% and 25.79%, respectively. There was a significantassociation of FecG1 of GDF9 gene polymorphism with litter size. The homozygous GGgenotype had the lowest litter size (1.59±0.09; n=65) and homozygous AA genotype hadthe highest litter size (2.00±0.41; n=4). No genotypic variations were found for FecG8.Findings of this study specially the polymorphism of FecG1 together with genotyping ofsome sheep could be utilized in the selection program to increase the lamb productionpotentiality of indigenous sheep of Bangladesh. Res. Agric., Livest. Fish.7(2): 283-292,  August 2020

Genetic correlations for reproductive and growth traits in rabbits

2020 ◽  
Vol 100 (2) ◽  
pp. 317-322 ◽  
Author(s):  
Rym Ezzeroug ◽  
Rafik Belabbas ◽  
Maria José Argente ◽  
Ali Berbar ◽  
Samir Diss ◽  
...  
Keyword(s):  
Litter Size ◽  
Coefficient Of Variation ◽  
Growth Traits ◽  
Genetic Correlations ◽  
Reproductive Traits ◽  
High Coefficient ◽  
Genetic And Phenotypic Correlations ◽  
The Common ◽  
Large Coefficient ◽  
Size At Birth

The objective of this study was to obtain heritability estimates for reproductive (litter size at birth, number born alive, litter size at weaning) and growth traits (individual weaning weight, individual weight at the end of the fattening period), then determine the genetic correlation between them in a synthetic rabbit line. A total of 805 females, 3242 parities, and 18 472 growth records were measured from 2006 to 2017. A pentavariate animal model was used with reproductive and growth traits. Heritability ranged from 0.025 to 0.126 for reproductive traits and from 0.033 to 0.059 for growth traits. These traits showed a large coefficient of variation (from 32% to 56% for reproductive traits and from 21% to 28% for growth traits). The repeatability of reproductive traits was low and the common litter effect for growth traits was the most important component of total variance. The genetic and phenotypic correlations between reproductive and growth traits were high and negative, especially with weight at weaning (−0.848, −0.922, and −0.854 for litter size at birth, number born alive, and litter size at weaning, respectively). In conclusion, because of the high negative correlation between reproductive and growth traits, both reproductive and growth traits should be selected in independent lines and the response to selection should be due mainly to the high coefficient of variation of the traits.

Detection of insertions/deletions (InDels) within the goat Runx2 gene and their association with litter size and growth traits

2019 ◽  
pp. 1-9 ◽  
Author(s):  
Enhui Jiang ◽  
Zihong Kang ◽  
Xinyu Wang ◽  
Yuan Liu ◽  
Xinfeng Liu ◽  
...  
Keyword(s):  
Litter Size ◽  
Growth Traits

Genetic relationships between seasonal tissue levels in Scottish Blackface ewes and lamb growth traits

2005 ◽  
Vol 81 (1) ◽  
pp. 11-21 ◽  
Author(s):  
N. R. Lambe ◽  
S. Brotherstone ◽  
M. J. Young ◽  
J. Conington ◽  
G. Simm
Keyword(s):  
Weight Gain ◽  
Birth Weight ◽  
Litter Size ◽  
Growth Traits ◽  
Genetic Relationships ◽  
Genetic Correlations ◽  
Muscle Weight ◽  
Litter Weight ◽  
Weight Gains ◽  
Lamb Growth

AbstractScottish Blackface ewes (no. = 308) were scanned four times per year using X-ray computed tomography (CT scanning) (pre-mating, pre-lambing, mid lactation and weaning), from 18 months to 5 years of age, giving a maximum of 16 scanning events per ewe. Total weights of carcass fat, internal fat and carcass muscle were estimated from the CT images at each scanning event. Lambs produced by these ewes were weighed at birth, mid lactation and weaning to calculate litter growth traits: litter birth weight; litter weight gain from birth until mid lactation; and litter weight gain from birth until weaning. Genetic (rg) and phenotypic (rp) correlations were estimated between ewe CT tissue traits and litter growth traits. Correlations between ewe CT tissue traits and litter size (LS) were also estimated. Ewe CT tissue traits were either unadjusted or adjusted for total soft tissue weight (sum of weights of carcass fat, internal fat and carcass muscle) to investigate relationships with either absolute tissue weights of carcass fat (CFWT), internal fat (IFWT), and carcass muscle (CMWT), or relative proportions of carcass fat (CFP), internal fat (IFP), and carcass muscle (CMP). Litter growth traits were either unadjusted or adjusted for litter size, to investigate relationships with total lamb burden (total litter birth weight (TBW), total litter weight gain from birth until mid lactation (TWGM), total litter weight gain from birth until weaning (TWGW)) or average lamb performance (average lamb birth weight (ABW), average lamb weight gain from birth until mid lactation (AWGM), average lamb weight gain from birth until weaning (AWGW)).Moderate to large positive genetic correlations were estimated between absolute weights of all three ewe tissues (CFWT, IFWT, CMWT), or muscle proportion (CMP), and litter size (LS). Significant positive genetic correlations were also estimated between weight (CMWT) or proportion (CMP) of muscle carried by the ewe pre-mating and total birth weight (TBW) and weight gains (TWGM, TWGW) of her litter, largely due to the associated increase in litter size. Muscle proportion (CMP) was not significantly correlated to average lamb weights or weight gains (ABW, AWGM, AWGW). Pre-lambing carcass fat weight (CFWT) and proportion (CFP) in the ewe showed positive genetic correlations with average lamb weights and weight gains (ABW, AWGM, AWGW), whereas, after lambing, CFP was negatively correlated with these lamb traits. Internal fat weight (IFWT) pre-mating showed positive genetic correlations with all litter growth traits (TBW, TWGM, TWGW, ABW, AWGM, AWGW). Average lamb growth traits were negatively correlated with pre-lambing internal fat proportion (IFP), but positively correlated to IFP at mid lactation and weaning.Correlations were also estimated between each pair of CT traits. Total internal fat weight and total carcass fat weight were very highly correlated (rp= 0·75,rg= 0·96). Correlations with total carcass muscle weight were smaller and positive for both carcass fat weight (rp= 0·48,rg= 0·12) and internal fat weight (rp= 0·42,rg= 0·20).The results suggest that selection for increased carcass muscle weight or proportion in a Scottish Blackface hill flock would have a positive effect on total weights of litters reared, but that selection against carcass fat weight or proportion in a breeding programme for Blackface sheep may have an impact on the maternal ability of the ewe. However, maintaining fat in internal depots may reduce the depletion of carcass fat during pregnancy, allowing this depot to provide energy for lactation, and may have a positive impact on lamb growth.

scholarly journals Erratum to: Investigation on early growth traits, litter size, and lamb survival in two Iranian fat-tailed sheep breeds

2012 ◽  
Vol 45 (4) ◽  
pp. 1055-1055
Author(s):  
Hadi Atashi ◽  
Jamshid Izadifard ◽  
Mohammad Javad Zamiri ◽  
Amir Akhlaghi
Keyword(s):  
Litter Size ◽  
Growth Traits ◽  
Early Growth ◽  
Sheep Breeds ◽  
Lamb Survival

scholarly journals Detection of single nucleotide polymorphisms at major prolificacy genes in the Mehraban sheep and association with litter size

2018 ◽  
Vol 18 (3) ◽  
pp. 685-698 ◽  
Author(s):  
Reza Talebi ◽  
Ahmad Ahmadi ◽  
Fazlollah Afraz ◽  
Julien Sarry ◽  
Florent Woloszyn ◽  
...  
Keyword(s):  
Single Nucleotide Polymorphisms ◽  
Litter Size ◽  
Potential Role ◽  
Chromosome 6 ◽  
The Novel ◽  
Nucleotide Polymorphisms ◽  
Single Nucleotide ◽  
Hardy Weinberg Equilibrium ◽  
Gdf9 Gene

Abstract The present study aimed to investigate the presence of polymorphisms at four known genes controlling ovine prolificacy i.e. BMP15, GDF9, BMPR1B and B4GALNT2 in a sample of 115 Iranian Mehraban ewes and their association with litter size (LS) and lambs’ birth weight (BW) traits. Using Sanger sequencing of exons and polymorphism specific genotyping, ten SNPs (Single Nucleotide Polymorphisms) were observed in only two genes, GDF9 and BMPR1B. Seven SNPs were found in the GDF9 gene on the chromosome 5. Among them, six were already described in the coding sequence, and a new one (g.41840985C>T) was found in the 3’UTR. In the BMPR1B gene on the chromosome 6, three novel SNPs were detected in the exon 7 (g.29382184G>A; g.29382337G>A and g.29382340G>A). Allelic frequencies were established for six SNPs among the ten identified and they were in Hardy-Weinberg equilibrium. A significant association was found between the novel SNPs found in the exon 7 of BMPR1B and LS. Present results indicate the potential role of the BMPR1B locus in controlling prolificacy of Mehraban sheep and provide genetic markers for further exploitation in selection to improve reproductive efficiency.

scholarly journals Effect of estrogen receptor, follicle stimulating hormone and myogenin genes on the performance of Large White sows

2008 ◽  
Vol 52 (No. 10) ◽  
pp. 334-340 ◽  
Author(s):  
P. Humpolíček ◽  
T. Urban ◽  
V. Matoušek ◽  
Z. Tvrdoň
Keyword(s):  
Estrogen Receptor ◽  
Litter Size ◽  
Growth Traits ◽  
Receptor Gene ◽  
Follicle Stimulating Hormone ◽  
Average Daily Gain ◽  
Large White ◽  
Meat Content ◽  
Reproduction Traits ◽  
Stimulating Hormone

The study was designed to determine the associations between the Estrogen Receptor Gene (<i>ESR - PvuII</i>), Follicle Stimulating Hormone Gene (<i>FSHB - HaeIII</i>) and Myogenin Gene (<i>MYOG - MspI</i>) with traits characterizing the sow efficiency comprehensively. Concretely, the age of the first conception (AFC), service period (SP), insemination interval (InI), total number of piglets born (TNB), number of piglets born alive (NBA), number of piglets weaned (NW), lean meat content (LMC), backfat thickness (BFT) and average daily gain (ADG) were included in the study. Significant effects of <i>ESR</i> and <i>FSHB</i> genes on litter size (particularly in the second parity) and on reproduction traits were found in the investigated population. The influence of <i>MYOG</i> gene on reproduction traits was observed but there was no effect of this gene on litter size. None of the included genes had an effect on growth traits. The results outline the possible application of the above-mentioned genes in selection of Large White sows.

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