scholarly journals Maximizing Dissimilarity in Resting State detects Heterogeneous Subtypes in Healthy population associated with High Substance-Use and Problems in Antisocial Personality

2019 ◽  
Author(s):  
Rajan Kashyap ◽  
Sagarika Bhattacharjee ◽  
B.T. Thomas Yeo ◽  
SH Annabel Chen
Keyword(s):  
Resting State ◽  
Illicit Drugs ◽  
Resting State Fmri ◽  
Healthy Population ◽  
Antisocial Personality ◽  
Human Connectome Project ◽  
Single Subjects ◽  
Healthy Control ◽  
The Common ◽  
Subcortical Regions

AbstractPatterns in resting-state fMRI (rs-fMRI) are widely used to characterize the trait effects of brain function. In this aspect, multiple rs-fMRI scans from single subjects can provide interesting clues about the rs-fMRI patterns, though scan-to-scan variability pose challenges. Therefore, rs-fMRI’s are either concatenated or the functional connectivity is averaged. This leads to loss of information. Here, we use an alternative way to extract the rs-fMRI features that are common across all the scans by applying Common-and-Orthogonal-Basis-Extraction (COBE) technique. To address this, we employed rs-fMRI of 788 subjects from the human connectome project and estimated the common-COBE-component of each subject from the four rs-fMRI runs. Since the common-COBE-component are specific to a subject, the pattern was used to classify the subjects based on the similarity/dissimilarity of the features. The subset of subjects (n=107) with maximal-COBE-Dissimilarity (MCD) was extracted and the remaining subjects (n = 681) formed the COBE-similarity (CS) group. The distribution of weights of the common-COBE-component for the two groups across rs-fMRI networks and subcortical regions was evaluated. We found the weights in the default mode network to be lower in the MCD compared to the CS. We compared the scores of 69 behavioral measures and found 6 behaviors related to the use of marijuana, illicit drugs, alcohol, and tobacco; and including a measure of antisocial personality to differentiate the two groups. Gender differences were also significant. Altogether findings suggested that subtypes exist even in healthy control population and comparison studies (Case vs Control) need to be mindful of it.

scholarly journals Dysfunction of anterior insula in the non- affected hemisphere in patients with post- stroke depression: A resting-state fMRI study

2021 ◽  
Vol 29 ◽  
pp. 35-48
Author(s):  
Eunhee Park ◽  
Jang Woo Park ◽  
Yu-Sun Min ◽  
Yang-Soo Lee ◽  
Byung-Soo Kim ◽  
...  
Keyword(s):  
Resting State ◽  
Resting State Fmri ◽  
Depressive Mood ◽  
Brain Regions ◽  
Anterior Insula ◽  
Post Stroke ◽  
Fmri Study ◽  
Post Stroke Depression ◽  
Healthy Control ◽  
Subcortical Regions

BACKGROUND: Post-stroke depression (PSD) is a consequential neuropsychiatric sequela that occurs after stroke. However, the pathophysiology of PSD are not well understood yet. OBJECTIVE: To explore alterations in functional connectivity (FC) between anterior insula and fronto-cortical and other subcortical regions in the non-affected hemisphere in patients with PSD compared to without PSD and healthy control. METHODS: Resting-state FC was estimated between the anterior insula and cortical and subcortical brain regions in the non-affected hemisphere in 13 patients with PSD, 12 patients without PSD, and 13 healthy controls. The severity of depressive mood was measured by the Beck Depression Inventory (BDI)-II. RESULTS: Patients with PSD showed significant differences in FC scores between the anterior insula and the superior frontal, middle frontal, and orbitofrontal gyrus in the non-affected hemisphere than healthy control or patients without PSD (P< 0.05). In post-hoc, patients with PSD showed higher FC scores between the anterior insula and the superior frontal region than patients without PSD (P< 0.05). Furthermore, alterations in FC of the superior frontal, middle frontal, and orbitofrontal gyrus were positively correlated with depression severity, as measured with the BDI-II (P< 0.001).

scholarly journals Rest-task Modulation of fMRI-derived Global Signal Topography is Mediated by Transient Co-activation Patterns

2019 ◽  
Author(s):  
Jianfeng Zhang ◽  
Zirui Huang ◽  
Shankar Tumati ◽  
Georg Northoff
Keyword(s):  
Resting State ◽  
Resting State Fmri ◽  
Peak Period ◽  
Physiological Noise ◽  
Activation Patterns ◽  
Global Signal ◽  
Co Activation ◽  
Human Connectome Project ◽  
Partial Dissociation ◽  
Signal Correlation

AbstractRecent resting-state fMRI studies have revealed that the global signal (GS) exhibits a non-uniform spatial distribution across the gray matter. Whether this topography is informative remains largely unknown. We therefore tested rest-task modulation of global signal topography by analyzing static global signal correlation and dynamic co-activation patterns in a large sample of fMRI dataset (n=837) from the Human Connectome Project. The GS topography in the resting-state and in seven different tasks was first measured by correlating the global signal with the local timeseries (GSCORR). In the resting state, high GSCORR was observed mainly in the primary sensory and motor regions, while low GSCORR was seen in the association brain areas. This pattern changed during the seven tasks, with mainly decreased GSCORR in sensorimotor cortex. Importantly, this rest-task modulation of GSCORR could be traced to transient co-activation patterns at the peak period of global signal (GS-peak). By comparing the topography of GSCORR and respiration effects, we observed that the topography of respiration mimicked the topography of global signal in the resting-state whereas both differed during the task states; due to such partial dissociation, we assume that GSCORR could not be equated with a respiration effect. Finally, rest-task modulation of GS topography could not be exclusively explained by other sources of physiological noise. Together, we here demonstrate the informative nature of global signal topography by showing its rest-task modulation, the underlying dynamic co-activation patterns, and its partial dissociation from respiration effects during task states.

scholarly journals Evaluating the sensitivity of functional connectivity measures to motion artifact in resting-state fMRI data

2020 ◽  
Author(s):  
Arun S. Mahadevan ◽  
Ursula A. Tooley ◽  
Maxwell A. Bertolero ◽  
Allyson P. Mackey ◽  
Danielle S. Bassett
Keyword(s):  
Functional Connectivity ◽  
Resting State ◽  
Partial Correlation ◽  
Motion Artifact ◽  
Resting State Fmri ◽  
Alternative Methods ◽  
Fmri Data ◽  
Retest Reliability ◽  
Human Connectome Project ◽  
Test Retest Reliability

AbstractFunctional connectivity (FC) networks are typically inferred from resting-state fMRI data using the Pearson correlation between BOLD time series from pairs of brain regions. However, alternative methods of estimating functional connectivity have not been systematically tested for their sensitivity or robustness to head motion artifact. Here, we evaluate the sensitivity of six different functional connectivity measures to motion artifact using resting-state data from the Human Connectome Project. We report that FC estimated using full correlation has a relatively high residual distance-dependent relationship with motion compared to partial correlation, coherence and information theory-based measures, even after implementing rigorous methods for motion artifact mitigation. This disadvantage of full correlation, however, may be offset by higher test-retest reliability and system identifiability. FC estimated by partial correlation offers the best of both worlds, with low sensitivity to motion artifact and intermediate system identifiability, with the caveat of low test-retest reliability. We highlight spatial differences in the sub-networks affected by motion with different FC metrics. Further, we report that intra-network edges in the default mode and retrosplenial temporal sub-networks are highly correlated with motion in all FC methods. Our findings indicate that the method of estimating functional connectivity is an important consideration in resting-state fMRI studies and must be chosen carefully based on the parameters of the study.

scholarly journals Impact of anaesthesia on static and dynamic functional connectivity in mice

2021 ◽  
Author(s):  
Tomokazu Tsurugizawa ◽  
Daisuke Yoshimaru
Keyword(s):  
Functional Connectivity ◽  
Functional Mri ◽  
Resting State ◽  
Low Frequency ◽  
Resting State Fmri ◽  
Brain Network ◽  
List Type ◽  
Thalamic Nuclei ◽  
Dynamic Functional Connectivity ◽  
Subcortical Regions

AbstractA few studies have compared the static functional connectivity between awake and anaesthetized states in rodents by resting-state fMRI. However, impact of anaesthesia on static and dynamic fluctuations in functional connectivity has not been fully understood. Here, we developed a resting-state fMRI protocol to perform awake and anaesthetized functional MRI in the same mice. Static functional connectivity showed a widespread decrease under anaesthesia, such as when under isoflurane or a mixture of isoflurane and medetomidine. Several interhemispheric connections were key connections for anaesthetized condition from awake. Dynamic functional connectivity demonstrates the shift from frequent broad connections across the cortex, the hypothalamus, and the auditory-visual cortex to frequent local connections within the cortex only. Fractional amplitude of low frequency fluctuation in the thalamic nuclei decreased under both anaesthesia. These results indicate that typical anaesthetics for functional MRI alters the spatiotemporal profile of the dynamic brain network in subcortical regions, including the thalamic nuclei and limbic system.HighlightsResting-state fMRI was compared between awake and anaesthetized in the same mice.Anaesthesia induced a widespread decrease of static functional connectivity.Anaesthesia strengthened local connections within the cortex.fALFF in the thalamus was decreased by anaesthesia.

scholarly journals Test–Retest Reliability of Synchrony and Metastability in Resting State fMRI

2021 ◽  
Vol 12 (1) ◽  
pp. 66
Author(s):  
Lan Yang ◽  
Jing Wei ◽  
Ying Li ◽  
Bin Wang ◽  
Hao Guo ◽  
...  
Keyword(s):  
Resting State ◽  
Resting State Fmri ◽  
Resting State Networks ◽  
Functional Magnetic Resonance ◽  
Intra Class Correlation ◽  
Retest Reliability ◽  
Brain Signals ◽  
Human Connectome Project ◽  
Test Retest Reliability ◽  
The Brain

In recent years, interest has been growing in dynamic characteristic of brain signals from resting-state functional magnetic resonance imaging (rs-fMRI). Synchrony and metastability, as neurodynamic indexes, are considered as one of methods for analyzing dynamic characteristics. Although much research has studied the analysis of neurodynamic indices, few have investigated its reliability. In this paper, the datasets from the Human Connectome Project have been used to explore the test–retest reliabilities of synchrony and metastability from multiple angles through intra-class correlation (ICC). The results showed that both of these indexes had fair test–retest reliability, but they are strongly affected by the field strength, the spatial resolution, and scanning interval, less affected by the temporal resolution. Denoising processing can help improve their ICC values. In addition, the reliability of neurodynamic indexes was affected by the node definition strategy, but these effects were not apparent. In particular, by comparing the test–retest reliability of different resting-state networks, we found that synchrony of different networks was basically stable, but the metastability varied considerably. Among these, DMN and LIM had a relatively higher test–retest reliability of metastability than other networks. This paper provides a methodological reference for exploring the brain dynamic neural activity by using synchrony and metastability in fMRI signals.

scholarly journals Peripheral Interleukin-18 Is Negatively Correlated With Abnormal Brain Activity In Patients With Depression: A Resting-State fMRI Study

2021 ◽  
Author(s):  
Xiangdong Du ◽  
Siyun Zou ◽  
Yan Yue ◽  
Xiaojia Fang ◽  
Yuxuan Wu ◽  
...  
Keyword(s):  
Resting State ◽  
Brain Activity ◽  
Resting State Fmri ◽  
Enzyme Linked Immunosorbent Assay ◽  
Control Group ◽  
Pathophysiological Mechanism ◽  
Interleukin 18 ◽  
Fmri Study ◽  
Rest State Fmri ◽  
Healthy Control

Abstract Background: Interleukin-18 (IL-18) may participate in the development of major depressive disorder, but the specific mechanism remains unclear. This study aimed to explore whether IL-18 correlates with areas of the brain associated with depression.Methods: Using a case-control design, 68 subjects (34 patients and 34 healthy controls) underwent clinical assessment, blood sampling, and resting-state functional Magnetic Resonance Imaging (fMRI). The total Hamilton depression-17 (HAMD-17) score was used to assess depression severity. Enzyme-linked immunosorbent assay (ELISA) was used to detect IL-18 levels. Rest-state fMRI was conducted to explore the spontaneous brain activity. Results: The level of IL-18 was higher in patients with depression in comparison with health controls. IL-18 and degree centrality (DC) were negatively correlated with the left posterior cingulate gyrus in the depression patient group, but no correlation was found in the healthy control group. Conclusion: This study suggests the involvement of IL-18 in the pathophysiological mechanism for depression and interference with brain activity.

scholarly journals A distributed brain network predicts general intelligence from resting-state human neuroimaging data

2018 ◽  
Author(s):  
Julien Dubois ◽  
Paola Galdi ◽  
Lynn K. Paul ◽  
Ralph Adolphs
Keyword(s):  
Resting State ◽  
Brain Volume ◽  
Resting State Fmri ◽  
Brain Network ◽  
Cognitive Tasks ◽  
Reliable Estimate ◽  
General Intelligence ◽  
Total Brain Volume ◽  
General Ability ◽  
Human Connectome Project

AbstractIndividual people differ in their ability to reason, solve problems, think abstractly, plan and learn. A reliable measure of this general ability, also known as intelligence, can be derived from scores across a diverse set of cognitive tasks. There is great interest in understanding the neural underpinnings of individual differences in intelligence, since it is the single best predictor of longterm life success. The most replicated neural correlate of human intelligence to date is total brain volume; however, this coarse morphometric correlate says little about function. Here we ask whether measurements of the activity of the resting brain (resting-state fMRI) might also carry information about intelligence. We used the final release of the Young Adult Human Connectome Project (N=884 subjects after exclusions), providing a full hour of resting-state fMRI per subject; controlled for gender, age, and brain volume; and derived a reliable estimate of general intelligence from scores on multiple cognitive tasks. Using a cross-validated predictive framework, we predicted 20% of the variance in general intelligence in the sampled population from their resting-state connectivity matrices. Interestingly, no single anatomical structure or network was responsible or necessary for this prediction, which instead relied on redundant information distributed across the brain.

scholarly journals A distributed brain network predicts general intelligence from resting-state human neuroimaging data

2018 ◽  
Vol 373 (1756) ◽  
pp. 20170284 ◽  
Author(s):  
Julien Dubois ◽  
Paola Galdi ◽  
Lynn K. Paul ◽  
Ralph Adolphs
Keyword(s):  
Individual Differences ◽  
Resting State ◽  
Brain Volume ◽  
Resting State Fmri ◽  
Brain Network ◽  
Cognitive Tasks ◽  
Reliable Estimate ◽  
General Intelligence ◽  
Total Brain Volume ◽  
Human Connectome Project

Individual people differ in their ability to reason, solve problems, think abstractly, plan and learn. A reliable measure of this general ability, also known as intelligence, can be derived from scores across a diverse set of cognitive tasks. There is great interest in understanding the neural underpinnings of individual differences in intelligence, because it is the single best predictor of long-term life success. The most replicated neural correlate of human intelligence to date is total brain volume; however, this coarse morphometric correlate says little about function. Here, we ask whether measurements of the activity of the resting brain (resting-state fMRI) might also carry information about intelligence. We used the final release of the Young Adult Human Connectome Project (N= 884 subjects after exclusions), providing a full hour of resting-state fMRI per subject; controlled for gender, age and brain volume; and derived a reliable estimate of general intelligence from scores on multiple cognitive tasks. Using a cross-validated predictive framework, we predicted 20% of the variance in general intelligence in the sampled population from their resting-state connectivity matrices. Interestingly, no single anatomical structure or network was responsible or necessary for this prediction, which instead relied on redundant information distributed across the brain.This article is part of the theme issue ‘Causes and consequences of individual differences in cognitive abilities’.

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