scholarly journals A multi-seasonal model of plant-nematode interactions and its use to identify optimal plant resistance deployment strategies

2019 ◽  
Author(s):  
Samuel Nilusmas ◽  
Mathilde Mercat ◽  
Thomas Perrot ◽  
Caroline Djian-Caporalino ◽  
Philippe Castagnone-Sereno ◽  
...  
Keyword(s):  
Crop Yield ◽  
Plant Root ◽  
List Type ◽  
Fitness Costs ◽  
Seasonal Model ◽  
Optimal Rotation ◽  
Plant Nematode ◽  
Parameter Ranges ◽  
The Impact ◽  
Plant Root Systems

SummaryRoot-knot nematodes (RKNs) are soil-borne polyphagous pests with major impact on crop yield worlwide. Resistant crops efficiently control avirulent RKNs, but favour the emergence of virulent forms. Virulence being associated with fitness costs, susceptible crops counter-select virulent RKNs. In this study we identify optimal rotation strategies between susceptible and resistant crops to control RKNs and maximize crop yield.We developed an epidemiological model describing the within-season dynamics of avirulent and virulent RKNs on susceptible or resistant plant root-systems, and their between-season survival. The model was fitted to experimental data and used to predict yield-maximizing rotation strategies, with special attention to the impact of epidemic and genetic parameters.Crop rotations were found to be efficient under realistic parameter ranges. They were characterised by low ratios of resistant plants, and were robust to parameter uncertainty. Rotations provide significant gain over resistant-only strategies, especially under intermediate fitness costs and severe epidemic contexts.Switching from the current general deployment of resistant crops to custom rotation strategies could not only maintain or increase crop yield, but also preserve the few and valuable R-genes available to us.

scholarly journals Assessing the Sensitivity of Main Crop Yields to Climate Change Impacts in China

Atmosphere ◽  
2021 ◽  
Vol 12 (2) ◽  
pp. 172
Author(s):  
Yuan Xu ◽  
Jieming Chou ◽  
Fan Yang ◽  
Mingyang Sun ◽  
Weixing Zhao ◽  
...  
Keyword(s):  
Climate Change ◽  
Crop Yield ◽  
Food Production ◽  
Crop Yields ◽  
Climatic Factors ◽  
Climatic Data ◽  
The South ◽  
The North ◽  
Output Elasticity ◽  
The Impact

Quantitatively assessing the spatial divergence of the sensitivity of crop yield to climate change is of great significance for reducing the climate change risk to food production. We use socio-economic and climatic data from 1981 to 2015 to examine how climate variability led to variation in yield, as simulated by an economy–climate model (C-D-C). The sensitivity of crop yield to the impact of climate change refers to the change in yield caused by changing climatic factors under the condition of constant non-climatic factors. An ‘output elasticity of comprehensive climate factor (CCF)’ approach determines the sensitivity, using the yields per hectare for grain, rice, wheat and maize in China’s main grain-producing areas as a case study. The results show that the CCF has a negative trend at a rate of −0.84/(10a) in the North region, while a positive trend of 0.79/(10a) is observed for the South region. Climate change promotes the ensemble increase in yields, and the contribution of agricultural labor force and total mechanical power to yields are greater, indicating that the yield in major grain-producing areas mainly depends on labor resources and the level of mechanization. However, the sensitivities to climate change of different crop yields to climate change present obvious regional differences: the sensitivity to climate change of the yield per hectare for maize in the North region was stronger than that in the South region. Therefore, the increase in the yield per hectare for maize in the North region due to the positive impacts of climate change was greater than that in the South region. In contrast, the sensitivity to climate change of the yield per hectare for rice in the South region was stronger than that in the North region. Furthermore, the sensitivity to climate change of maize per hectare yield was stronger than that of rice and wheat in the North region, and that of rice was the highest of the three crop yields in the South region. Finally, the economy–climate sensitivity zones of different crops were determined by the output elasticity of the CCF to help adapt to climate change and prevent food production risks.

scholarly journals Using Satellite Data for CBRN (Chemical, Biological, Radiological, and Nuclear) Threat Detection, Monitoring, and Modelling

2021 ◽  
Author(s):  
Gary Sutlieff ◽  
Lucy Berthoud ◽  
Mark Stinchcombe
Keyword(s):  
Satellite Data ◽  
Meteorological Data ◽  
Atmospheric Composition ◽  
Chemical Detection ◽  
List Type ◽  
Data Types ◽  
Wide Range ◽  
Future Technologies ◽  
The Impact ◽  
Near Future

Abstract CBRN (Chemical, Biological, Radiological, and Nuclear) threats are becoming more prevalent, as more entities gain access to modern weapons and industrial technologies and chemicals. This has produced a need for improvements to modelling, detection, and monitoring of these events. While there are currently no dedicated satellites for CBRN purposes, there are a wide range of possibilities for satellite data to contribute to this field, from atmospheric composition and chemical detection to cloud cover, land mapping, and surface property measurements. This study looks at currently available satellite data, including meteorological data such as wind and cloud profiles, surface properties like temperature and humidity, chemical detection, and sounding. Results of this survey revealed several gaps in the available data, particularly concerning biological and radiological detection. The results also suggest that publicly available satellite data largely does not meet the requirements of spatial resolution, coverage, and latency that CBRN detection requires, outside of providing terrain use and building height data for constructing models. Lastly, the study evaluates upcoming instruments, platforms, and satellite technologies to gauge the impact these developments will have in the near future. Improvements in spatial and temporal resolution as well as latency are already becoming possible, and new instruments will fill in the gaps in detection by imaging a wider range of chemicals and other agents and by collecting new data types. This study shows that with developments coming within the next decade, satellites should begin to provide valuable augmentations to CBRN event detection and monitoring. Article Highlights There is a wide range of existing satellite data in fields that are of interest to CBRN detection and monitoring. The data is mostly of insufficient quality (resolution or latency) for the demanding requirements of CBRN modelling for incident control. Future technologies and platforms will improve resolution and latency, making satellite data more viable in the CBRN management field

scholarly journals Does agricultural intensification cause tipping points in ecosystem services?

2021 ◽  
Author(s):  
Stephen C. L. Watson ◽  
Adrian C. Newton ◽  
Lucy E. Ridding ◽  
Paul M. Evans ◽  
Steven Brand ◽  
...  
Keyword(s):  
Ecosystem Services ◽  
Agricultural Intensification ◽  
Spatial Dynamics ◽  
Policy Option ◽  
List Type ◽  
Tipping Points ◽  
Software Models ◽  
Non Linear ◽  
Study Interval ◽  
The Impact

Abstract Context Agricultural intensification is being widely pursued as a policy option to improve food security and human development. Yet, there is a need to understand the impact of agricultural intensification on the provision of multiple ecosystem services, and to evaluate the possible occurrence of tipping points. Objectives To quantify and assess the long-term spatial dynamics of ecosystem service (ES) provision in a landscape undergoing agricultural intensification at four time points 1930, 1950, 1980 and 2015. Determine if thresholds or tipping points in ES provision may have occurred and if there are any detectable impacts on economic development and employment. Methods We used the InVEST suite of software models together with a time series of historical land cover maps and an Input–Output model to evaluate these dynamics over an 85-year period in the county of Dorset, southern England. Results Results indicated that trends in ES were often non-linear, highlighting the potential for abrupt changes in ES provision to occur in response to slight changes in underlying drivers. Despite the fluctuations in provision of different ES, overall economic activity increased almost linearly during the study interval, in line with the increase in agricultural productivity. Conclusions Such non-linear thresholds in ES will need to be avoided in the future by approaches aiming to deliver sustainable agricultural intensification. A number of positive feedback mechanisms are identified that suggest these thresholds could be considered as tipping points. However, further research into these feedbacks is required to fully determine the occurrence of tipping points in agricultural systems.

128 Development of an M1-polarized, non-viral chimeric antigen receptor macrophage (CAR-M) platform for cancer immunotherapy

2020 ◽  
Vol 8 (Suppl 3) ◽  
pp. A141-A141
Author(s):  
Yumi Ohtani ◽  
Kayleigh Ross ◽  
Aditya Dandekar ◽  
Rashid Gabbasov ◽  
Michael Klichinsky
Keyword(s):  
Cancer Immunotherapy ◽  
Chimeric Antigen Receptor ◽  
Scale Up ◽  
Antigen Receptor ◽  
Innate Immune ◽  
List Type ◽  
M1 Phenotype ◽  
The Impact ◽  
Anti Tumor Activity ◽  
Immunosuppressive Factors

BackgroundWe have previously developed CAR-M as a novel cell therapy approach for the treatment of solid tumors.1 CAR-M have the potential to overcome key challenges that cell therapies face in the solid tumor setting – tumor infiltration, immunosuppression, lymphocyte exclusion – and can induce epitope spreading to overcome target antigen heterogeneity. While macrophages transduced with the adenoviral vector Ad5f35 (Ad CAR-M) traffic to tumors, provide robust anti-tumor activity, and recruit and activate T cells, we sought to identify a robust non-viral method of macrophage engineering in order to reduce the cost of goods, manufacturing complexity, and potential immunogenicity associated with viral vectors.MethodsAs innate immune cells, macrophages detect exogenous nucleic acids and respond with inflammatory and apoptotic programs. Thus, we sought to identify a means of mRNA delivery that avoids recognition by innate immune sensors. We screened a broad panel of mRNA encoding an anti-HER2 CAR comprising multiplexed 5’Cap and base modifications using an optimized and scalable electroporation approach and evaluated the impact of interferon-β priming on CAR-M phenotype and function.ResultsWe identified the optimal multiplexed mRNA modifications that led to maximal macrophage viability, transfection efficiency, intensity of CAR expression, and duration of expression. Non-viral HER2 CAR-M phagocytosed and killed human HER2+ tumor cells. Unlike Ad CAR-M, mRNA CAR-M were not skewed toward an M1 state by mRNA electroporation. Priming non-viral CAR-M with IFN-β induced a durable M1 phenotype, as shown by stable upregulation of numerous M1 markers and pathways. IFN-β priming significantly enhanced the anti-tumor activity of CAR but not control macrophages. IFN-β primed mRNA CAR-M were resistant to M2 conversion, maintaining an M1 phenotype despite challenge with various immunosuppressive factors, and converted bystander M2 macrophages toward M1. Interestingly, priming mRNA CAR-M with IFN-β significantly enhanced the persistence of CAR expression, overcoming the known issue of rapid mRNA turnover. RNA-seq analysis revealed that IFN-β priming affected pathways involved in increasing translation and decreasing RNA degradation in human macrophages.ConclusionsWe have established a novel, optimized non-viral CAR-M platform based on chemically modified mRNA and IFN-β priming. IFN-β priming induced a durable M1 phenotype, improved CAR expression, improved CAR persistence, led to enhanced anti-tumor function, and rendered resistance to immunosuppressive factors. This novel platform is amenable to scale-up, GMP manufacturing, and represents an advance in the development of CAR-M.ReferenceKlichinsky M, Ruella M, Shestova O, et al. Human chimeric antigen receptor macrophages for cancer immunotherapy. Nat Biotechnol 2020;38(8):947–953.

scholarly journals Research on the impact of ship traffic flow on the restricted channel segment of the middle Yangtze River based on traffic wave theory

2021 ◽  
Vol 3 (8) ◽  
Author(s):  
Ting Liu ◽  
Gabriel Lodewijks
Keyword(s):  
Traffic Flow ◽  
Flow Rate ◽  
Flow Simulation ◽  
Wave Theory ◽  
Flow Density ◽  
List Type ◽  
Ship Traffic ◽  
Traffic Wave ◽  
The Impact ◽  
Channel Segment

Abstract Abstract On the basis of the influence of dry season on ship traffic flow, the gathering and dissipating process of ship traffic flow was researched with Greenshields linear flow—density relationship model, the intrinsic relationship between the ship traffic congestion state and traffic wave in the unclosed restricted channel segment was emphatically explored when the ship traffic flow in a tributary channel inflows, and the influence law of multiple traffic waves on the ship traffic flow characteristics in unclosed restricted segment is revealed. On this basis, the expressions of traffic wave speed and direction, dissipation time of queued ships and the number of ships affected were provided, and combined with Monte Carlo method, the ship traffic flow simulation model in the restricted channel segment was built. The simulation results show that in closed restricted channel segment the dissipation time of ships queued is mainly related to the ship traffic flow rate of segments A and C, and the total number of ships affected to the ship traffic flow rate of segment A. And in unclosed restricted channel segment, the dissipation time and the total number of ships affected are also determined by the meeting time of the traffic waves in addition to the ship traffic flow rate of segments. The research results can provide the theoretical support for further studying the ship traffic flow in unclosed restricted channel segment with multiple tributaries Article Highlights The inflow of tributaries' ship traffic flows has an obvious impact on the traffic conditions in the unenclosed restricted channel segment. The interaction and influence between multiple ship traffic waves and the mechanism of generating new traffic waves are explained. The expression of both dissipation time of queued ships and the total number of ships affected in the closed and unclosed restricted channel segment are given.

scholarly journals Determination of Zero Dimensional, Apparent Devolatilization Kinetics for Biomass Particles at Suspension Firing Conditions

Energies ◽  
2021 ◽  
Vol 14 (4) ◽  
pp. 1018
Author(s):  
Anna Espekvist ◽  
Tian Li ◽  
Peter Glarborg ◽  
Terese Løvås ◽  
Peter Arendt Jensen
Keyword(s):  
Aspect Ratio ◽  
Particle Density ◽  
Fluid Dynamic ◽  
Particle Radius ◽  
Biomass Combustion ◽  
Least Squares Regression ◽  
Gas Temperature ◽  
Density Maximum ◽  
Parameter Ranges ◽  
The Impact

As part of the strive for a carbon neutral energy production, biomass combustion has been widely implemented in retrofitted coal burners. Modeling aids substantially in prediction of biomass flame behavior and thus in boiler chamber conditions. In this work, a simple model for devolatilization of biomass at conditions relevant for suspension firing is presented. It employs Arrhenius parameters in a single first order (SFOR) devolatilization reaction, where the effects of kinetics and heat transfer limitations are lumped together. In this way, a biomass particle can be modeled as a zero dimensional, isothermal particle, facilitating computational fluid dynamic calculations of boiler chambers. The zero dimensional model includes the effects of particle aspect ratio, particle density, maximum gas temperature, and particle radius. It is developed using the multivariate data analysis method, partial least squares regression, and is validated against a more rigorous semi-2D devolatilization model. The model has the capability to predict devolatilization time for conditions in the parameter ranges; radius (39–1569 μμm), density (700–1300 kg/m3), gas temperature (1300–1900 K), aspect ratio (1.01–8). Results show that the particle radius and gas phase temperature have a large influence on the devolatilization rate, and the aspect ratio has a comparatively smaller effect, which, however, cannot be neglected. The impact of aspect ratio levels off as it increases. The model is suitable for use as stand alone or as a submodel for biomass particle devolatilization in CFD models.

scholarly journals Antibiotics at birth and later antibiotic courses: effects on gut microbiota

2021 ◽  
Author(s):  
Sofia Ainonen ◽  
Mysore V Tejesvi ◽  
Md. Rayhan Mahmud ◽  
Niko Paalanne ◽  
Tytti Pokka ◽  
...  
Keyword(s):  
Gut Microbiota ◽  
Control Group ◽  
List Type ◽  
Antibiotic Exposure ◽  
Microbiota Composition ◽  
Long Term Effects ◽  
The Impact ◽  
Antibiotic Courses ◽  
Gut Microbiota Composition

Abstract Background Intrapartum antibiotic prophylaxis (IAP) is widely used, but the evidence of the long-term effects on the gut microbiota and subsequent health of children is limited. Here, we compared the impacts of perinatal antibiotic exposure and later courses of antibiotic courses on gut microbiota. Methods This was a prospective, controlled cohort study among 100 vaginally delivered infants with different perinatal antibiotic exposures: control (27), IAP (27), postnatal antibiotics (24), and IAP and postnatal antibiotics (22). At 1 year of age, we performed next-generation sequencing of the bacterial 16S ribosomal RNA gene of fecal samples. Results Exposure to the perinatal antibiotics had a clear impact on the gut microbiota. The abundance of the Bacteroidetes phylum was significantly higher in the control group, whereas the relative abundance of Escherichia coli was significantly lower in the control group. The impact of the perinatal antibiotics on the gut microbiota composition was greater than exposure to later courses of antibiotics (28% of participants). Conclusions Perinatal antibiotic exposure had a marked impact on the gut microbiota at the age of 1 year. The timing of the antibiotic exposure appears to be the critical factor for the changes observed in the gut microbiota. Impact Infants are commonly exposed to IAP and postnatal antibiotics, and later to courses of antibiotics during the first year of life. Perinatal antibiotics have been associated with an altered gut microbiota during the first months of life, whereas the evidence regarding the long-term impact is more limited. Perinatal antibiotic exposure had a marked impact on the infant’s gut microbiota at 1 year of age. Impact of the perinatal antibiotics on the gut microbiota composition was greater than that of the later courses of antibiotics at the age of 1 year.

scholarly journals Anomalous Laterally Stressed Kinetically Trapped DNA Surface Conformations

2021 ◽  
Vol 13 (1) ◽  
Author(s):  
Valery V. Prokhorov ◽  
Nikolay A. Barinov ◽  
Kirill A. Prusakov ◽  
Evgeniy V. Dubrovin ◽  
Maxim D. Frank-Kamenetskii ◽  
...  
Keyword(s):  
Electrostatic Interaction ◽  
Mechanical Response ◽  
Persistence Length ◽  
Strong Impact ◽  
List Type ◽  
Surface Charges ◽  
Monomolecular Films ◽  
Chain Approximation ◽  
The Impact ◽  
Positively Charged

Highlights DNA kinking is inevitable for the highly anisotropic 1D–1D electrostatic interaction with the one-dimensionally periodically charged surface. The double helical structure of the DNA kinetically trapped on positively charged monomolecular films comprising the lamellar templates is strongly laterally stressed and extremely perturbed at the nanometer scale. The DNA kinetic trapping is not a smooth 3D—> 2D conformational flattening but is a complex nonlinear in-plane mechanical response (bending, tensile and unzipping) driven by the physics beyond the scope of the applicability of the linear worm-like chain approximation. Abstract Up to now, the DNA molecule adsorbed on a surface was believed to always preserve its native structure. This belief implies a negligible contribution of lateral surface forces during and after DNA adsorption although their impact has never been elucidated. High-resolution atomic force microscopy was used to observe that stiff DNA molecules kinetically trapped on monomolecular films comprising one-dimensional periodically charged lamellar templates as a single layer or as a sublayer are oversaturated by sharp discontinuous kinks and can also be locally melted and supercoiled. We argue that kink/anti-kink pairs are induced by an overcritical lateral bending stress (> 30 pNnm) inevitable for the highly anisotropic 1D-1D electrostatic interaction of DNA and underlying rows of positive surface charges. In addition, the unexpected kink-inducing mechanical instability in the shape of the template-directed DNA confined between the positively charged lamellar sides is observed indicating the strong impact of helicity. The previously reported anomalously low values of the persistence length of the surface-adsorbed DNA are explained by the impact of the surface-induced low-scale bending. The sites of the local melting and supercoiling are convincingly introduced as other lateral stress-induced structural DNA anomalies by establishing a link with DNA high-force mechanics. The results open up the study in the completely unexplored area of the principally anomalous kinetically trapped DNA surface conformations in which the DNA local mechanical response to the surface-induced spatially modulated lateral electrostatic stress is essentially nonlinear. The underlying rich and complex in-plane nonlinear physics acts at the nanoscale beyond the scope of applicability of the worm-like chain approximation.

scholarly journals The Pitfalls of Relating Weeds, Herbicide Use, and Crop Yield: Don't Fall Into the Trap! A Critical Review

2020 ◽  
Vol 2 ◽  
Author(s):  
Nathalie Colbach ◽  
Sandrine Petit ◽  
Bruno Chauvel ◽  
Violaine Deytieux ◽  
Martin Lechenet ◽  
...  
Keyword(s):  
Crop Yield ◽  
Weed Management ◽  
Crop Production ◽  
Yield Loss ◽  
Crop Yields ◽  
Cropping Systems ◽  
Crop Productivity ◽  
Arable Farming ◽  
Herbicide Use ◽  
The Impact

The growing recognition of the environmental and health issues associated to pesticide use requires to investigate how to manage weeds with less or no herbicides in arable farming while maintaining crop productivity. The questions of weed harmfulness, herbicide efficacy, the effects of herbicide use on crop yields, and the effect of reducing herbicides on crop production have been addressed over the years but results and interpretations often appear contradictory. In this paper, we critically analyze studies that have focused on the herbicide use, weeds and crop yield nexus. We identified many inconsistencies in the published results and demonstrate that these often stem from differences in the methodologies used and in the choice of the conceptual model that links the three items. Our main findings are: (1) although our review confirms that herbicide reduction increases weed infestation if not compensated by other cultural techniques, there are many shortcomings in the different methods used to assess the impact of weeds on crop production; (2) Reducing herbicide use rarely results in increased crop yield loss due to weeds if farmers compensate low herbicide use by other efficient cultural practices; (3) There is a need for comprehensive studies describing the effect of cropping systems on crop production that explicitly include weeds and disentangle the impact of herbicides from the effect of other practices on weeds and on crop production. We propose a framework that presents all the links and feed-backs that must be considered when analyzing the herbicide-weed-crop yield nexus. We then provide a number of methodological recommendations for future studies. We conclude that, since weeds are causing yield loss, reduced herbicide use and maintained crop productivity necessarily requires a redesign of cropping systems. These new systems should include both agronomic and biodiversity-based levers acting in concert to deliver sustainable weed management.

Sign in / Sign up

Export Citation Format

Share Document