scholarly journals Mean growth rate when rare is not a reliable metric for persistence of species

2019 ◽  
Author(s):  
Jayant Pande ◽  
Tak Fung ◽  
Ryan Chisholm ◽  
Nadav M. Shnerb

AbstractThe coexistence of many species within ecological communities poses a long-standing theoretical puzzle. Modern coexistence theory (MCT) and related techniques explore this phenomenon by examining the chance of a species population growing from rarity in the presence of all other species. The mean growth rate when rare, 𝔼[r], is used in MCT as a metric that measures persistence properties (like invasibility or time to extinction) of a population. Here we critique this reliance on 𝔼[r] and show that it fails to capture the effect of random abundance variations on persistence properties. The problem becomes particularly severe when an increase in the amplitude of stochastic temporal environmental variations leads to an increase in 𝔼[r], since at the same time it enhances random abundance fluctuations and the two effects are inherently intertwined. In this case, the chance of invasion and the mean extinction time of a population may even go down as 𝔼[r] increases.

2018 ◽  
Author(s):  
Gregory J. Kimmel ◽  
Philip Gerlee ◽  
Philipp M. Altrock

AbstractThe co-evolutionary dynamics of competing populations can be strongly affected by frequency-dependent selection and population structure in space. As co-evolving populations grow into a spatial domain, their initial spatial arrangement, as well as their growth rate differences determine the dynamics. Here, we are interested in the dynamics of producers and free-rider co-evolution in the context of an ecological public good that is produced by a sub-population but evokes growth benefits to all individuals. We consider the spatial growth dynamics in one, two and three dimensions by modeling producer cell, free-rider cell and public good densities in space, driven by birth, death and diffusion. Typically, one population goes extinct. We find that uncorrelated initial spatial structures do not influence the time to extinction in comparison to the well-mixed system. We derive a slow manifold solution in order to estimate the time to extinction of either free-riders or producers. For invading populations, i.e. for populations that are initially highly segregated, we observe a traveling wave, whose speed can be calculated to improve the extinction time estimate by a simple superposition of the two times. Our results show that local effects of spatial dynamics evolve independently of the dynamics of the mean populations. Our considerations provide quantitative predictions for the transient dynamics of cooperative traits under pressure of extinction, and a potential experiment to derive elusive details of the fitness function of an ecological public goods game through extinction time observations.Author SummaryEcological public goods (PG) relationships emerge in growing cellular populations, for example between bacteria and cancer cells. We study the eco-evolutionary dynamics of a PG in populations that grow in space. In our model, public good-producer cells and free-rider cells can grow according to their own birth and death rates. Co-evolution occurs due to public good-driven surplus in the intrinsic growth rates and a cost to producers. A net growth rate benefit to free-riders leads to the well-known tragedy of the commons in which producers go extinct. What is often omitted from discussions is the time scale on which this extinction can occur, especially in spatial populations. We derive analytical estimates of the time to extinction in different spatial settings, and identify spatial scenarios in which extinction takes long enough such that the tragedy of the commons never occurs within the lifetime of the populations. Using numerical simulations we analyze the deviations from analytical predictions. Our results have direct implications for inferring ecological public good game properties from in vitro and in vivo experimental observations.


2019 ◽  
Author(s):  
Bnaya Steinmetz ◽  
Michael Kalyuzhny ◽  
Nadav M. Shnerb

AbstractRecent studies have found considerable trait variations within species. The effect of such intra-specific trait variability (ITV) on the stability, coexistence and diversity of ecological communities received considerable attention and in many models it was shown to impede coexistence and decrease species diversity. Here we present a numerical study of the effect of genetically inherited ITV on species persistence and diversity in a temporally fluctuating environment. Two mechanisms are identified. First, ITV buffers populations against varying environmental conditions (portfolio effect) and reduces abundance variations. Second, the interplay between ITV and environmental variations tends to increase the mean fitness of diverse populations. The first mechanism promotes persistence and tends to increase species richness, while the second reduces the chance of a rare species population (which is usually homogenous) to invade and decreases species richness. We show that for large communities the portfolio effect is dominant, leading to ITV promoting species persistence and richness.


2020 ◽  
pp. 30-33
Author(s):  
D. R. Аgliullin ◽  
G. R. Khasanova ◽  
E. A. Abdulaeva ◽  
S. T. Agliullina ◽  
A. N. Amirov ◽  
...  

Objective: To assess the incidence of central serous chorioretinopathy (CSC) through the example of a large industrial Russian city.Methods: A retrospective analysis of CSC of Kazan population for 2009–2018 has been done.Results: From 2019 to 2018, 831 new cases of CSC were registered in Kazan. A statistically significant upward trend with growth rate 105.2% and accession rate 5.2% was typical for the annual track record. The mean age of patients was 50 years, the minimum age was 14 years, the maximum age was 87 years. A statistically significant upward trend was detected in track record of incidence in groups of 30–39-year-old and 40–49-year-old. Seasonal increase of the incidence was recorded in February, March, April, October, and November.Conclusions: The upward trend and seasonal prevalence are typical for longterm morbidity of CSC in Kazan. The highest morbidity rate of CSC and statistically significant upward trend of its incidence in track record were recorded in the age of 30–39. 


1994 ◽  
Vol 59 (7) ◽  
pp. 1503-1510
Author(s):  
Stanislav Žáček ◽  
Jaroslav Nývlt

Lead iodide was precipitated from aqueous solutions of 0.015 - 0.1 M Pb(NO3)2 and 0.03 - 0.2 M KI in the equimolar ratio using a laboratory model of a stirred continuous crystallizer at 22 °C. After reaching the steady state, the PbI2 crystal size distribution was measured sedimentometrically and the crystallization kinetics was evaluated based on the mean particle size. Both the linear crystal growth rate and the nucleation rate depend on the specific output of the crystallizer. The system crystallization constant either points to a significant effect of secondary nucleation by the mechanism of contact of the crystals with the stirrer blade, or depends on the concentrations of the components added due to the micromixing mechanism.


2020 ◽  
Vol 2020 (1) ◽  
Author(s):  
Xiangjun Dai ◽  
Suli Wang ◽  
Weizhi Xiong ◽  
Ni Li

Abstract We propose and study a stochastic delay single-species population system in polluted environment with psychological effect and pulse toxicant input. We establish sufficient conditions for the extinction, nonpersistence in the mean, weak persistence, and strong persistence of the single-species population and obtain the threshold value between extinction and weak persistence. Finally, we confirm the efficiency of the main results by numerical simulations.


2018 ◽  
Vol 26 (4) ◽  
pp. 217-222
Author(s):  
Premwadee Chueachat ◽  
Woraporn Tarangkoon ◽  
Suwat Tanyaros

Abstract A comparative study on the nursery culture of the spat of the tropical oyster, Crassostrea iredalei, in an earthen pond and a mangrove canal was conducted over two months. The results revealed no differences in the absolute growth rate determined by shell width between the two culture sites (P < 0.05). Sub-adult oysters cultured in the mangrove canal showed a higher absolute growth rate in shell length and a higher daily growth rate than the oysters cultured in the earthen pond (P < 0.05). The mean survival rate of sub-adult oysters cultured in the earthen pond (99.8 ± 0.2%) was significantly higher than for those cultured in the mangrove canal (66.7 ± 31.4%). Decreased density from the loss of sub-adult oyster nursery culture in the mangrove canal led to higher growth performance than in the earthen pond. However, no difference was found for the fraction of oysters larger or smaller than 5 cm for the two culture sites (P < 0.05). A significant difference was noted in the Condition Index (CI) between the two culture sites (P < 0.05). The high primary productivity in mangroves is a major supporter of higher CI in sub-adult oysters cultured in mangrove canals versus in earthen ponds. Water exchange in the earthen pond to maintain calcium and magnesium concentrations resulted in no differences in the shell compressibility of sub-adult oysters compared with those cultured in the mangrove canal.


1998 ◽  
Vol 1998 ◽  
pp. 63-63
Author(s):  
C. Rymer ◽  
D.I. Givens

The gas production (GP) technique has been developed to assess dynamics of ruminant digestion. Relationships have been observed between a feed's GP profile and in vivo parameters such as digestibility (Khazaal et al., 1993), feed intake and growth rate (Blümmel and Ørskov, 1993), and in situ degradability (Sileshi et al., 1997). However, there are few studies which relate GP data to the in vivo pattern of rumen fermentation (in terms of the rate of pH decline 2 h post-feeding and the mean rumen pH, concentration of total VFA and molar proportion of individual VFA). The object of this experiment was to determine whether such a relationship existed between a feed's GP profile and the pattern of rumen fermentation observed in animals fed that feed.


2008 ◽  
Vol 90 (6) ◽  
pp. 477-482 ◽  
Author(s):  
S Devaraj ◽  
SR Dodds

INTRODUCTION Some studies have considered abdominal aortas of 2.6–2.9 cm diameter (ectatic aortas) at age 65 years as being abnormal and have recommended surveillance, whereas others have considered these normal and surveillance unnecessary. It is, therefore, not clear how to manage patients with an initial aortic diameter between 2.6–2.9 cm detected at screening. The aim of this study was to evaluate growth rates of ectatic aortas detected on initial ultrasound screening to determine if any developed into clinically significant abdominal aortic aneurysms (AAAs; > 5.0 cm) and clarify the appropriate surveillance intervals for these patients. PATIENTS AND METHODS Data were obtained from a prospective AAA screening programme which commenced in 1992. The group of patients with initial aortic diameters of 2.6–2.9 cm with a minimum of 1-year follow-up were included in this study (Group 2). This was further divided into two subgroups (Groups 3a and 3b) based on a minimum follow-up interval obtained from outcome analysis. Mean growth rate was calculated as change in aortic diameter with time. The comparison of growth rates in Groups 3a and 3b was performed using the t-test. The number and proportion of AAAs that expanded to ≥ 3.0 cm and ≥ 5.0 cm in diameter were also calculated. RESULTS Out of 999 patients with AAA ≥ 2.6 cm with minimum 1-year follow-up, 358 (36%) were classified as ectatic aortas (2.6–2.9 cm) at initial ultrasound screening with the mean growth rate of 1.69 mm/year (95% CI, 1.56–1.82 mm/year) with a mean follow-up of 5.4 years. Of these 358 ectatic aortas, 314 (88%) expanded into ≥ 3.0 cm, 45 (13%) expanded to ≥ 5.0 cm and only 8 (2%) expanded to ≥ 5.5 cm over a mean follow-up of 5.4 years (range, 1–14 years). No ectatic aortas expanded to ≥ 5.0 cm within the first 4 years of surveillance. Therefore, the minimum follow-up interval was set at 4 years and this threshold was then used for further analysis. The mean growth rate in Group 3a (< 5.0 cm at last scan) was 1.33 mm/year (95% CI, 1.23–1.44 mm/year) with a mean follow-up of 7 years compared to Group 3b (≥ 5.0 cm at last scan) with the mean growth rate of 3.33 mm/year (95% CI 3.05–3.61 mm/year) and a mean follow-up of 8 years. The comparison of mean growth rates between Groups 3a and 3b is statistically significant (t-test; T = 13.00; P < 0.001). CONCLUSIONS One-third of patients undergoing AAA screening will have ectatic aortas (2.6–2.9 cm) and at least 13% of these will expand to a size of ≥ 5.0 cm over a follow-up of 4–14 years. A threshold diameter of 2.6 cm for defining AAAs in a screening programme is recommended and ectatic aortas detected at age 65 years can be re-screened at 4 years after the initial scan. A statistically significant difference was found in the growth rates of ectatic aortas with minimum 4 years follow-up, expanding to ≥ 5.0 cm compared to those less than 5.0 cm at last surveillance scan. Further studies are required to test the hypothesis of whether growth rate over the first 4 years of surveillance will identify those who are most likely to expand to a clinically significant size (> 5.0 cm).


1955 ◽  
Vol 46 (2) ◽  
pp. 173-179 ◽  
Author(s):  
G. Harrington ◽  
J. H. Taylor

1. Certain carcass measurements (length, shoulder and mid-back fats, belly thickness and dressing percentage) made on a total of 402 bacon pigs from four antibiotic feeding trials have been analysed.2. The length of the carcasses showed more variation between pens treated with various doses of penicillin than between control pens or pens treated with aureomycin. This greater variation in length was related to the greater variation in growth rate between the penicillin treatments. No differences in the mean lengths of control, penicillin and aureomycin treatments were found.3. Back fat measurements and belly thickness showed no differences between aureomycin, penicillin and control treatments in overall tests.4. Aureomycin consistently gave higher dressing percentages than penicillin. Animal protein also gave higher dressing percentages than vegetable protein, but no effect of vitamin B12 on this quantity was found.


2014 ◽  
Vol 66 (3) ◽  
pp. 1097-1103 ◽  
Author(s):  
Janne Thirstrup ◽  
Cino Pertoldi ◽  
Peter Larsen ◽  
Vivi Nielsen

Litter sizes in a cross between Brown and Black mink color types were observed through six generations. Litter size was significantly affected by yearly environmental variations. After adjusting for year effects, we found significant increases in litter size in the second and third generations (F2 and F3) after crossing. Thereafter, in the following generations, litter size dropped to a level comparable to the mean litter size of the midparent. Increased litter size in F2 compared to F1 indicated that maternal effects influenced litter size more than non-maternal effects. The heterosis was mainly caused by an increase in litter size compared to the Black parental line. This indicates that the Black line was affected by inbreeding depression prior to crossing. We also found that two-year old F1 females had significantly more offspring compared to one-year old F1 females.


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