Inter- and intracellular colonization of Arabidopsis roots by endophytic actinobacteria and the impact of plant hormones on their antimicrobial activity
ABSTRACTMany actinobacteria live in close association with eukaryotes like fungi, insects, animals and plants. Plant-associated actinobacteria display (endo)symbiotic, saprophytic or pathogenic life styles, and can make up a substantial part of the endophytic community. Here, we characterised endophytic actinobacteria isolated from root tissue ofArabidopsis thaliana(Arabidopsis) plants grown in soil from a natural ecosystem. Many of these actinobacteria belong to the family ofStreptomycetaceaewithStreptomyces olivochromogenesandStreptomyces claviferas well represented species. When seeds of Arabidopsis were inoculated with spores ofStreptomycesstrain coa1, which shows high similarity toS. olivochromogenes, roots were colonised intercellularly and, unexpectedly, also intracellularly. Subsequent exposure of endophytic isolates to plant hormones typically found in root and shoot tissues of Arabidopsis led to altered antibiotic production againstEscherichia coliandBacillus subtilis. Taken together, our work reveals remarkable colonization patterns of endophytic streptomycetes with specific traits that may allow a competitive advantage inside root tissue.