scholarly journals Host resistance and coevolution in spatially structured populations

2010 ◽  
Vol 278 (1715) ◽  
pp. 2216-2222 ◽  
Author(s):  
Alex Best ◽  
Steve Webb ◽  
Andy White ◽  
Mike Boots
Keyword(s):  
Host Resistance ◽  
Structured Populations ◽  
Stochastic Simulations ◽  
Human Populations ◽  
Population Mixing ◽  
Individual Fitness ◽  
Spatially Structured Populations ◽  
Evolution Of Resistance ◽  
Approximate Mathematical Model ◽  
Mixing Patterns

Natural, agricultural and human populations are structured, with a proportion of interactions occurring locally or within social groups rather than at random. This within-population spatial and social structure is important to the evolution of parasites but little attention has been paid to how spatial structure affects the evolution of host resistance, and as a consequence the coevolutionary outcome. We examine the evolution of resistance across a range of mixing patterns using an approximate mathematical model and stochastic simulations. As reproduction becomes increasingly local, hosts are always selected to increase resistance. More localized transmission also selects for higher resistance, but only if reproduction is also predominantly local. If the hosts disperse, lower resistance evolves as transmission becomes more local. These effects can be understood as a combination of genetic (kin) and ecological structuring on individual fitness. When hosts and parasites coevolve, local interactions select for hosts with high defence and parasites with low transmissibility and virulence. Crucially, this means that more population mixing may lead to the evolution of both fast-transmitting highly virulent parasites and reduced resistance in the host.

scholarly journals Between migration load and evolutionary rescue: dispersal, adaptation and the response of spatially structured populations to environmental change

2014 ◽  
Vol 281 (1778) ◽  
pp. 20132795 ◽  
Author(s):  
Elizabeth C. Bourne ◽  
Greta Bocedi ◽  
Justin M. J. Travis ◽  
Robin J. Pakeman ◽  
Rob W. Brooker ◽  
...  
Keyword(s):  
Evolutionary Dynamics ◽  
Structured Populations ◽  
Evolutionary Potential ◽  
Beneficial Effects ◽  
Individual Fitness ◽  
Spatially Structured Populations ◽  
Local Selection ◽  
Evolutionary Response ◽  
Evolutionary Rescue ◽  
Opposing Effects

The evolutionary potential of populations is mainly determined by population size and available genetic variance. However, the adaptability of spatially structured populations may also be affected by dispersal: positively by spreading beneficial mutations across sub-populations, but negatively by moving locally adapted alleles between demes. We develop an individual-based, two-patch, allelic model to investigate the balance between these opposing effects on a population's evolutionary response to rapid climate change. Individual fitness is controlled by two polygenic traits coding for local adaptation either to the environment or to climate. Under conditions of selection that favour the evolution of a generalist phenotype (i.e. weak divergent selection between patches) dispersal has an overall positive effect on the persistence of the population. However, when selection favours locally adapted specialists, the beneficial effects of dispersal outweigh the associated increase in maladaptation for a narrow range of parameter space only (intermediate selection strength and low linkage among loci), where the spread of beneficial climate alleles is not strongly hampered by selection against non-specialists. Given that local selection across heterogeneous and fragmented landscapes is common, the complex effect of dispersal that we describe will play an important role in determining the evolutionary dynamics of many species under rapidly changing climate.

scholarly journals Cost of dispersal in a social mammal: body mass loss and increased stress

2019 ◽  
Vol 286 (1896) ◽  
pp. 20190033 ◽  
Author(s):  
Nino Maag ◽  
Gabriele Cozzi ◽  
Andrew Bateman ◽  
Michael Heistermann ◽  
André Ganswindt ◽  
...  
Keyword(s):  
Body Mass ◽  
Structured Populations ◽  
Stress Hormone ◽  
Transient Stage ◽  
Hormone Levels ◽  
Suricata Suricatta ◽  
Individual Fitness ◽  
Spatially Structured Populations ◽  
Short Period ◽  
Individual Body

Dispersal is a key process influencing the dynamics of socially and spatially structured populations. Dispersal success is determined by the state of individuals at emigration and the costs incurred after emigration. However, quantification of such costs is often difficult, due to logistical constraints of following wide-ranging individuals. We investigated the effects of dispersal on individual body mass and stress hormone levels in a cooperative breeder, the meerkat ( Suricata suricatta ). We measured body mass and faecal glucocorticoid metabolite (fGCM) concentrations from 95 dispersing females in 65 coalitions through the entire dispersal process. Females that successfully settled lost body mass, while females that did not settle but returned to their natal group after a short period of time did not. Furthermore, dispersing females had higher fGCM levels than resident females, and this was especially pronounced during the later stages of dispersal. By adding information on the transient stage of dispersal and by comparing dispersers that successfully settled to dispersers that returned to their natal group, we expand on previous studies focusing on the earlier stages of dispersal. We propose that body mass and stress hormone levels are good indicators to investigate dispersal costs, as these traits often play an important role in mediating the effects of the environment on other life-history events and individual fitness.

scholarly journals Strategies of host resistance to pathogens in spatially structured populations: An agent-based evaluation

2018 ◽  
Author(s):  
Christophe Boëte ◽  
Morgan Seston ◽  
Mathieu Legros
Keyword(s):  
Disease Resistance ◽  
Host Resistance ◽  
Evolutionary Dynamics ◽  
Resistance Mechanism ◽  
Resistance Mechanisms ◽  
Structured Populations ◽  
Theoretical Understanding ◽  
Resistance Strategies ◽  
Spatially Structured Populations ◽  
Spatial Lattice

AbstractThere is growing theoretical evidence that spatial structure can affect the ecological and evolutionary outcomes of host-parasite interactions. Locally restricted interactions have been shown in particular to affect host resistance and tolerance. In this study we investigate the evolution of several types of host disease resistance strategies, alone or in combination, in spatially structured populations. We construct a spatially explicit, individual-based stochastic model where hosts and parasites interact with each other in a spatial lattice, and interactions are restricted to a given neighbourhood of varying size. We investigate several host resistance strategies, including constitutive (expressed in all resistant hosts), induced (expressed only upon infection), and combinations thereof. We show that the specific resistance mechanism against a pathogen as well as the size of the neighbourhood both affect resistance spread and parasite dynamics, an effect modulated by the level of the cost of resistance. Our results shed new light on the dynamics of disease resistance in a spatially-structured host-pathogen system, and illustrate the conditions in which a variety of resistance mechanisms can be maintained, including when they are costly. Overall these results advance our theoretical understanding of the evolutionary dynamics of disease resistance, a necessary step to elaborate more efficient and sustainable strategies for disease management.

scholarly journals Vector-borne disease risk indexes in spatially structured populations

2018 ◽  
Vol 12 (2) ◽  
pp. e0006234 ◽  
Author(s):  
Jorge Velázquez-Castro ◽  
Andrés Anzo-Hernández ◽  
Beatriz Bonilla-Capilla ◽  
Moisés Soto-Bajo ◽  
Andrés Fraguela-Collar
Keyword(s):  
Disease Risk ◽  
Structured Populations ◽  
Vector Borne Disease ◽  
Spatially Structured Populations ◽  
Vector Borne

scholarly journals An Ancient Baboon Genome Demonstrates Long-Term Population Continuity in Southern Africa

2020 ◽  
Vol 12 (4) ◽  
pp. 407-412 ◽  
Author(s):  
Iain Mathieson ◽  
Federico Abascal ◽  
Lasse Vinner ◽  
Pontus Skoglund ◽  
Cristina Pomilla ◽  
...  
Keyword(s):  
Southern Africa ◽  
Nonhuman Primates ◽  
Demographic History ◽  
Structured Populations ◽  
Human Populations ◽  
Papio Ursinus ◽  
Anthropological Research ◽  
Population Continuity ◽  
High Degree

Abstract Baboons are one of the most abundant large nonhuman primates and are widely studied in biomedical, behavioral, and anthropological research. Despite this, our knowledge of their evolutionary and demographic history remains incomplete. Here, we report a 0.9-fold coverage genome sequence from a 5800-year-old baboon from the site of Ha Makotoko in Lesotho. The ancient baboon is closely related to present-day Papio ursinus individuals from southern Africa—indicating a high degree of continuity in the southern African baboon population. This level of population continuity is rare in recent human populations but may provide a good model for the evolution of Homo and other large primates over similar timespans in structured populations throughout Africa.

scholarly journals The effect of life-history and mode of inheritance on neutral genetic variability

2001 ◽  
Vol 77 (2) ◽  
pp. 153-166 ◽  
Author(s):  
BRIAN CHARLESWORTH
Keyword(s):  
Sequence Variation ◽  
Adult Mortality ◽  
Structured Populations ◽  
Human Populations ◽  
Effective Population ◽  
Transmission Modes ◽  
Population Sizes ◽  
Age Structured ◽  
Infinite Sites Model ◽  
Site Diversity

Formulae for the effective population sizes of autosomal, X-linked, Y-linked and maternally transmitted loci in age-structured populations are developed. The approximations used here predict both asymptotic rates of increase in probabilities of identity, and equilibrium levels of neutral nucleotide site diversity under the infinite-sites model. The applications of the results to the interpretation of data on DNA sequence variation in Drosophila, plant, and human populations are discussed. It is concluded that sex differences in demographic parameters such as adult mortality rates generally have small effects on the relative effective population sizes of loci with different modes of inheritance, whereas differences between the sexes in variance in reproductive success can have major effects, either increasing or reducing the effective population size for X-linked loci relative to autosomal or Y-linked loci. These effects need to be accounted for when trying to understand data on patterns of sequence variation for genes with different transmission modes.

scholarly journals Estado Atual de Conhecimento de Dinâmica de Populações

2019 ◽  
Vol 23 (3) ◽  
pp. 256
Author(s):  
Anna Clara Balbina Silva ◽  
Afonso Pelli
Keyword(s):  
Population Dynamics ◽  
Full Text ◽  
Mortality Rates ◽  
Structured Populations ◽  
Exclusion Criteria ◽  
Spatially Structured Populations ◽  
The Subject ◽  
Population Interactions ◽  
Dynamic Population ◽  
Critical Challenge

Compreender os mecanismos que regulam a dinâmica das populações espacialmente estruturadas é um desafio crítico para os ecólogos e gestores de conservação. A dinâmica de populações é um ramo da ecologia que estuda as populações como sistema em atividades, relacionando as influências ambientais com a distribuição e abundância dos indivíduos e suas interações com o ambiente. O presente artigo é uma revisão bibliográfica, com o objetivo de identificar produções científicas relevantes sobre dinâmica populacional. Para isso, foram utilizados periódicos revisados por pares, na base de Periódicos Capes. A pesquisa foi realizada em junho de 2019, utilizando-se as palavras-chave para título contendo: "population dynamics" e no assunto “ecology”, a partir de 2014, quando o texto completo estava disponível. Foram considerados como critérios de exclusão os artigos publicados antes de 2014. Após a leitura dos títulos dos artigos, foram selecionados 34 artigos que foram lidos na íntegra. Em livros disponíveis no acervo da biblioteca da Universidade Federal do Triângulo Mineiro, foram selecionados quatro livros no tema dinâmica populacional. O referencial teórico aborda os aspectos da dinâmica de populações, tabela de vida, formas de crescimento e interações populacionais. Ressalta-se a necessidade de novos estudos que ainda possuem lacunas, que venha complementar e contribuir para o conhecimento de organismos que faltam ou ainda não possuem registros de estudos. Palavras-chave: Taxas de Natalidade e Mortalidade. Atributos Populacionais. Dispersão. AbstractUnderstanding the mechanisms that regulate the dynamics of spatially structured populations is a critical challenge for ecologists and conservation managers. Population dynamics is a branch of ecology that studies populations as a system in activities, relating environmental influences to the individuals’ distribution and abundance and their interactions with the environment. This article is a bibliographic review, aiming to identify relevant scientific productions about population dynamics. Thus. peer-reviewed journals were used in the Capes Periodicals base, the research was conducted in June 2019, using the keywords for title containing "population dynamics" and in the subject "ecology", from 2014, when the full text was available. Exclusion criteria were: articles published before 2014, after reading the article titles, 34 articles were selected that met the initially proposed criteria and were read in full. In books available in the library collection of the Federal University of Triângulo Mineiro, with a search for the dynamic population theme, 4 books were used. The theoretical framework addresses the aspects of population dynamics, life table, forms of growth and population interactions. It is emphasized  the need for further studies that still have gaps, which will complement and contribute to the knowledge of organisms that are missing or do not have study records. Keywords: Birth and Mortality Rates. Population Attributes. Dispersion.

scholarly journals Putting RFMix and ADMIXTURE to the test in a complex admixed population

2020 ◽  
Author(s):  
Caitlin Uren ◽  
Eileen G. Hoal ◽  
Marlo Möller
Keyword(s):  
World Wide ◽  
Association Studies ◽  
Structured Populations ◽  
Human Populations ◽  
Computational Tools ◽  
Association Analyses ◽  
Local Ancestry ◽  
Diverse World ◽  
Admixed Population ◽  
Global And Local

Abstract Background Global and local ancestry inference in admixed human populations can be performed using computational tools implementing distinct algorithms. The development and resulting accuracy of these tools has been tested largely on populations with relatively straightforward admixture histories but little is known about how well they perform in more complex admixture scenarios. Results Using simulations, we show that RFMix outperforms ADMIXTURE in determining global ancestry proportions even in a complex 5-way admixed population, in addition to assigning local ancestry with an accuracy of 89%. The ability of RFMix to determine global and local ancestry to a high degree of accuracy, particularly in admixed populations provides the opportunity for more accurate association analyses. Conclusion This study highlights the utility of the extension of computational tools to become more compatible to genetically structured populations, as well as the need to expand the sampling of diverse world-wide populations. This is particularly noteworthy as modern-day societies are becoming increasingly genetically complex and some genetic tools and commonly used ancestral populations are less appropriate. Based on these caveats and the results presented here, we suggest that RFMix be used for both global and local ancestry estimation in world-wide complex admixture scenarios particularly when including these estimates in association studies.

scholarly journals EVOLUTION OF INTERACTIONS IN FAMILY-STRUCTURED POPULATIONS: MIXED MATING MODELS

Genetics ◽  
1980 ◽  
Vol 96 (1) ◽  
pp. 275-296
Author(s):  
Richard E Michod
Keyword(s):  
Mating System ◽  
Mating Systems ◽  
Random Mating ◽  
Additive Model ◽  
Multiplicative Model ◽  
Structured Populations ◽  
Mixed Mating ◽  
Genotypic Distribution ◽  
Individual Fitness ◽  
Recessive Genes

ABSTRACT The effect of inbreeding on sociality is studied theoretically for the evolution of interactions between siblings in certain mixed mating systems that give rise to inbreeding: sib with random mating and selfing with random mating. Two approaches are taken. First, specific models of altruism are studied for the various mating systems. In the case of the additive model, inbreeding facilitates the evolution of altruistic genes. Likewise, for the multiplicative model this is usually the case, as long as the costs of altruism are not too great. Second, the case of total altruism, in which the gene has zero individual fitness but increases the fitness of associates, is studied for a general fitness formulation. In this case, inbreeding often retards the ability of such genes to increase when rare, and the equilibrium frequency of those recessive genes that can increase is totally independent of the mating system and, consequently, of the amount of inbreeding. It appears from the results presented that inbreeding facilitates most forms of altruism, but retards extreme altruism. These results stem from the fact that inbreeding increases the within-family relatedness by increasing the between-family variance in allele frequency. In most cases this facilitates altruism. However, in the case of total altruism, only heterozygotes can pass on the altruistic allele, and inbreeding tends to decrease this heterozygote class. In either case, the important effect of inbreeding lies in altering the genotypic distribution of the interactions.

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