The initial step of DNA hairpin folding: a kinetic analysis using fluorescence correlation spectroscopy

J. Kim; S. Doose; H. Neuweiler; M. Sauer

doi:10.1093/nar/gkl221

The initial step of DNA hairpin folding: a kinetic analysis using fluorescence correlation spectroscopy

Nucleic Acids Research ◽

10.1093/nar/gkl221 ◽

2006 ◽

Vol 34 (9) ◽

pp. 2516-2527 ◽

Cited By ~ 99

Author(s):

J. Kim ◽

S. Doose ◽

H. Neuweiler ◽

M. Sauer

Keyword(s):

Kinetic Analysis ◽

Fluorescence Correlation Spectroscopy ◽

Initial Step ◽

Correlation Spectroscopy ◽

Dna Hairpin ◽

Fluorescence Correlation

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Scanning Single-Molecule Fluorescence Correlation Spectroscopy Enables Kinetics Study of DNA Hairpin Folding with a Time Window from Microseconds to Seconds

The Journal of Physical Chemistry Letters ◽

10.1021/acs.jpclett.6b00720 ◽

2016 ◽

Vol 7 (10) ◽

pp. 1865-1871 ◽

Cited By ~ 10

Author(s):

Huimin Bi ◽

Yandong Yin ◽

Bailong Pan ◽

Geng Li ◽

Xin Sheng Zhao

Keyword(s):

Single Molecule ◽

Fluorescence Correlation Spectroscopy ◽

Time Window ◽

Correlation Spectroscopy ◽

Kinetics Study ◽

Dna Hairpin ◽

Single Molecule Fluorescence ◽

Fluorescence Correlation

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Bayesian-Inference-Based Fluorescence Correlation Spectroscopy and Single-Molecule Burst Analysis Reveal the Influence of Dye Selection on DNA Hairpin Dynamics

ChemPhysChem ◽

10.1002/cphc.201100720 ◽

2012 ◽

Vol 13 (4) ◽

pp. 1013-1022 ◽

Cited By ~ 15

Author(s):

Wolfgang Kügel ◽

Adam Muschielok ◽

Jens Michaelis

Keyword(s):

Bayesian Inference ◽

Single Molecule ◽

Fluorescence Correlation Spectroscopy ◽

Correlation Spectroscopy ◽

Dna Hairpin ◽

Fluorescence Correlation ◽

Burst Analysis

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Three-State DNA Hairpin Conformational Dynamics Revealed by Higher-Order Fluorescence Correlation Spectroscopy

The Journal of Physical Chemistry B ◽

10.1021/acs.jpcb.8b10703 ◽

2019 ◽

Vol 123 (7) ◽

pp. 1491-1504 ◽

Cited By ~ 5

Author(s):

Farshad Abdollah-Nia ◽

Martin P. Gelfand ◽

Alan Van Orden

Keyword(s):

Fluorescence Correlation Spectroscopy ◽

Conformational Dynamics ◽

Higher Order ◽

Correlation Spectroscopy ◽

Dna Hairpin ◽

Fluorescence Correlation

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Dual-Beam Fluorescence Correlation Spectroscopy of DNA Hairpin Folding-Unfolding Reaction at Various Temperatures and Salt Concentrations

Biophysical Journal ◽

10.1016/j.bpj.2014.11.1288 ◽

2015 ◽

Vol 108 (2) ◽

pp. 233a

Author(s):

Farshad Abdollah-Nia ◽

Martin Gelfand ◽

Alan Van Orden

Keyword(s):

Fluorescence Correlation Spectroscopy ◽

Correlation Spectroscopy ◽

Dna Hairpin ◽

Fluorescence Correlation ◽

Dual Beam

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Review fluorescence correlation spectroscopy for probing the kinetics and mechanisms of DNA hairpin formation

Biopolymers ◽

10.1002/bip.20826 ◽

2008 ◽

Vol 89 (1) ◽

pp. 1-16 ◽

Cited By ~ 40

Author(s):

Alan Van Orden ◽

Jaemyeong Jung

Keyword(s):

Fluorescence Correlation Spectroscopy ◽

Correlation Spectroscopy ◽

Dna Hairpin ◽

Fluorescence Correlation ◽

Hairpin Formation

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Panorama of DNA hairpin folding observed via diffusion-decelerated fluorescence correlation spectroscopy

Chemical Communications ◽

10.1039/c2cc31986a ◽

2012 ◽

Vol 48 (59) ◽

pp. 7413-7415 ◽

Cited By ~ 17

Author(s):

Yandong Yin ◽

Peng Wang ◽

Xin Xing Yang ◽

Xun Li ◽

Chuan He ◽

...

Keyword(s):

Fluorescence Correlation Spectroscopy ◽

Correlation Spectroscopy ◽

Dna Hairpin ◽

Fluorescence Correlation

A wide kinetic range from ∼0.1 μs to 1 s is offered by diffusion-decelerated FCS, allowing simultaneously monitoring multi-kinetic components.

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Fluorescence Correlation Spectroscopy (FCS) a powerful biophysic method for drug discovery: study of Alexa532-endothelin 1 binding on the endothelin ETA receptor on living cells

Planta Medica ◽

10.1055/s-0028-1084790 ◽

2008 ◽

Vol 74 (09) ◽

Author(s):

C Caballero-George ◽

T Sorkalla ◽

E Bermingham ◽

H Häberlein

Keyword(s):

Drug Discovery ◽

Fluorescence Correlation Spectroscopy ◽

Living Cells ◽

Correlation Spectroscopy ◽

Fluorescence Correlation ◽

Endothelin 1 ◽

Eta Receptor

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Study of dynamics and nanosegregation in ionic liquids and deep eutectic solvents by fluorescence correlation spectroscopy

10.31274/etd-20200624-189 ◽

2020 ◽

Author(s):

Deyny Leticia Mendivelso-P?rez

Keyword(s):

Ionic Liquids ◽

Fluorescence Correlation Spectroscopy ◽

Deep Eutectic Solvents ◽

Correlation Spectroscopy ◽

Fluorescence Correlation

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Faculty Opinions recommendation of Fluorescence correlation spectroscopy analysis of serotonin, adrenergic, muscarinic, and dopamine receptor dimerization: the oligomer number puzzle.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.718057586.793482949 ◽

2013 ◽

Author(s):

Akihiro Kusumi ◽

Rinshi Kasai

Keyword(s):

Dopamine Receptor ◽

Fluorescence Correlation Spectroscopy ◽

Correlation Spectroscopy ◽

Spectroscopy Analysis ◽

Receptor Dimerization ◽

Fluorescence Correlation

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Review: Applications of Fluorescence Correlation Spectroscopy with Microfluidic Devices

Micro and Nanosystems ◽

10.2174/1876402911305020004 ◽

2013 ◽

Vol 5 (2) ◽

pp. 105-112

Author(s):

Tim C. Lei

Keyword(s):

Fluorescence Correlation Spectroscopy ◽

Microfluidic Devices ◽

Correlation Spectroscopy ◽

Fluorescence Correlation

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