A Novel Drug-Resistant HIV-1 Circulating Recombinant Form CRF76_01B Identified by Near Full-Length Genome Analysis

2016 ◽  
Vol 32 (3) ◽  
pp. 284-289 ◽  
Author(s):  
Satoko Ogawa ◽  
Atsuko Hachiya ◽  
Masumi Hosaka ◽  
Masakazu Matsuda ◽  
Hirotaka Ode ◽  
...  
Keyword(s):  
Genome Analysis ◽  
Full Length ◽  
Recombinant Form ◽  
Drug Resistant ◽  
Novel Drug ◽  
Full Length Genome ◽  
Hiv 1

scholarly journals Near Full-Length Genome Identification of a Novel HIV-1 Recombinant Form (CRF01_AE/B′/C) Among Heterosexuals in Jilin, China

2014 ◽  
Vol 30 (7) ◽  
pp. 695-700 ◽  
Author(s):  
Xingguang Li ◽  
Chuanyi Ning ◽  
Yanli Chen ◽  
Yi Feng ◽  
Min Wei ◽  
...  
Keyword(s):  
Full Length ◽  
Recombinant Form ◽  
Full Length Genome ◽  
Hiv 1

Full-Length Genome Analysis of HIV-1 Subtype C Utilizing CXCR4 and Intersubtype Recombinants Isolated in South Africa

2002 ◽  
Vol 18 (12) ◽  
pp. 879-886 ◽  
Author(s):  
Maria A. Papathanasopoulos ◽  
Tonie Cilliers ◽  
Lynn Morris ◽  
John L. Mokili ◽  
William Dowling ◽  
...  
Keyword(s):  
South Africa ◽  
Genome Analysis ◽  
Full Length ◽  
Subtype C ◽  
Full Length Genome ◽  
Hiv 1

Near Full-Length Genome Identification of a Novel HIV-1 Recombinant Form (CRF01_AE/CRF07_BC) in Zhejiang, China

2016 ◽  
Vol 32 (9) ◽  
pp. 900-903 ◽  
Author(s):  
Xiaorong Peng ◽  
Xu Li-jun ◽  
Tiansheng Xie ◽  
Fumin Liu ◽  
Nanping Wu
Keyword(s):  
Full Length ◽  
Recombinant Form ◽  
Full Length Genome ◽  
Hiv 1

Near-Full-Length Genome Sequences of a Novel HIV-1 Circulating Recombinant Form, CRF01_AE/B′/C (CRF78_cpx), in Yunnan, China

2016 ◽  
Vol 32 (6) ◽  
pp. 601-606 ◽  
Author(s):  
Yindi Song ◽  
Yue Feng ◽  
Zhijiang Miao ◽  
Binghui Wang ◽  
Ming Yang ◽  
...  
Keyword(s):  
Full Length ◽  
Recombinant Form ◽  
Genome Sequences ◽  
Full Length Genome ◽  
Hiv 1

scholarly journals Identification of CRF89_BF, a new member of an HIV-1 circulating BF intersubtype recombinant form family widely spread in South America

2021 ◽  
Author(s):  
Elena Delgado ◽  
Aurora Fernández-García ◽  
Ismael Fernández-Miranda ◽  
Sonia Benito ◽  
Vanesa Montero ◽  
...  
Keyword(s):  
South America ◽  
Genome Sequence ◽  
Full Length ◽  
Substantial Proportion ◽  
Recombinant Form ◽  
South American ◽  
Sequence Analyses ◽  
Full Length Genome ◽  
South American Origin ◽  
Hiv 1

Abstract Circulating recombinant forms (CRFs) represent a substantial proportion of infections in the HIV-1 pandemic. Among 103 CRFs described in the literature, 16 are BF intersubtype recombinants, most of South American origin, of which CRF12_BF is the most widely spread. A BF recombinant cluster identified in Bolivia was suggested to represent a new CRF_BF. Here, we find that this cluster belongs to a larger cluster incorporating 38 viruses collected in 7 countries from 3 continents, 21 of them in Spain, most from Bolivian or Peruvian individuals, and 12 in South America (Bolivia, Argentina, and Peru). It comprises three major subclusters, two associated with Bolivian individuals and one associated with Peruvian individuals. Near full-length genome sequence analyses of five viruses collected in Spain, Bolivia, and Peru revealed coincident BF mosaic structures, with 13 breakpoints, 5 and 6 of which coincided with CRF12_BF and CRF17_BF, respectively, and grouping in a clade closely related to these CRFs and more distantly to CRF38_BF and CRF44_BF, all circulating in South America. These results allow us to identify a new HIV-1 CRF, designated CRF89_BF. Through phylodynamic analyses, CRF89_BF emergence was estimated in Bolivia around 1984. CRF89_BF is the fifth CRF member of the HIV-1 recombinant family related to CRF12_BF

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