Conflict and congruence between morphological and molecular data: revision of the Merodon constans group (Diptera : Syrphidae)

2020 ◽  
Author(s):  
Ante Vujić ◽  
Snežana Radenković ◽  
Laura Likov ◽  
Andrijana Andrić ◽  
Marina Janković ◽  
...  
Keyword(s):  
Molecular Markers ◽  
Distinct Species ◽  
Morphological Characters ◽  
Molecular Data ◽  
Species Group ◽  
Rrna Genes ◽  
Rrna Gene ◽  
28S Rrna ◽  
The Status ◽  
Data Revision

We revise the Merodon constans species group of the genus Merodon Meigen, 1803 (Diptera: Syrphidae), provide morphological diagnosesand descriptions, as well as an illustrated key and a discussion on the different taxonomic characters used. In total, 15 species were studied, their geographic distributions are presented on maps, and nine new species are described. Two species are redefined and neotypes are designated, lectotypes are designated for five species, and onespeciesis reinstated as valid. Following a detailed study of type material in different entomological collections, the status of several species is revised and three new synonymies are proposed. The M. constans species group was resolved as being monophyletic within the M. albifrons lineage based on molecular analyses using COI and 28S rRNA gene sequences. Three species morphologically similar to M. constans (Rossi, 1794) but occurring outside its distributional rangewere supported as being valid and distinct species on the basis of molecular data, but they were not distinguishable based on morphological characters. By contrast, continental populations of M. analis Meigen, 1822 could not be separated from Mediterranean M. constans based on differences in COI or 28S rRNA genes. The same molecular markers could not discriminate between two other species pairs. We conclude that these molecular markers only partially resolve species within the M. constans group. Geometric morphometry of wing shape successfully separated M. analis and M. constans, as well as M. spineus Vujić, Šašić Zorić & Likov, sp. nov. in both species and population analyses.

Taxonomy of the Oulimnius tuberculatus species group (Coleoptera: Elmidae) based on molecular and morphological data

Zootaxa ◽  
2010 ◽  
Vol 2670 (1) ◽  
pp. 59 ◽  
Author(s):  
FEDOR ČIAMPOR JR. ◽  
JÁN KODADA
Keyword(s):  
Taxonomic Status ◽  
Distinct Species ◽  
Morphological Characters ◽  
Molecular Data ◽  
Species Group ◽  
Morphological Data ◽  
Cytochrome Oxidase Subunit ◽  
Mitochondrial Cytochrome Oxidase Subunit ◽  
16S Rna ◽  
Mitochondrial Cytochrome Oxidase

Two mitochondrial (cytochrome oxidase subunit I, 16S RNA) and one nuclear (18S RNA) gene fragments were used to analyse relationships within the Oulimnius tuberculatus species group. The results of molecular data analysis are compared with morphological characters, and the distributional patterns and taxonomic status of recognized taxa are addressed. Based on molecular data, Oulimnius perezi is re-validated as a distinct species, and the discovery of a possible new species from northwest Italy is reported. The possible origins and times of speciation within the species group are discussed.

A century later - a total evidence re-evaluation of the phylogeny of scutigeromorph centipedes (Myriapoda:Chilopoda)

2006 ◽  
Vol 20 (5) ◽  
pp. 503 ◽  
Author(s):  
Gregory D. Edgecombe ◽  
Gonzalo Giribet
Keyword(s):  
Molecular Markers ◽  
18S Rrna ◽  
Sequence Data ◽  
Histone H3 ◽  
Sister Group ◽  
Morphological Characters ◽  
Molecular Data ◽  
Total Evidence ◽  
28S Rrna ◽  
Group Relationships

Scutigeromorpha (‘house centipedes’) play a pivotal role in myriapod systematics in being the sister group to all other chilopods, but their internal phylogeny has not been comprehensively appraised since K. W. Verhoeff’s morphological investigations a century ago. Relationships between the three families of Scutigeromorpha are inferred based on a combined analysis of approximately 5.5 Kb of sequence data from five molecular markers (complete 18S rRNA, a 2.2-Kb fragment of 28S rRNA, 16S rRNA, cytochrome c oxidase subunit I, histone H3) and 33 ingroup morphological characters. Molecular data are available for 19 ingroup terminals representing 14 morphospecies that include the genera Scutigerina, Madagassophora (family Scutigerinidae), Sphendononema (family Pselliodidae), Scutigera, Thereuopoda, Thereuopodina, Thereuonema, Allothereua and Parascutigera (family Scutigeridae). Morphology resolves the southern African–Malagasy Scutigerinidae as sister to all other Scutigeromorpha, whereas rival sister-group relationships between the Neotropical–Afrotropical Pselliodidae and Scutigerinidae + Scutigeridae or Pselliodidae + Scutigerinidae and Scutigeridae are resolved by the molecular and combined analyses. Monophyly of Scutigeridae and Thereuoneminae are stable across a broad range of analytical parameters. Thereuoneminae is composed of two stable clades: an Allothereua + Parascutigera group, and a grouping of Thereuopoda, Thereuonema and Thereuopodina. Molecular and combined analyses resolve the genus Scutigerina and the morphospecies Scutigerina weberi as paraphyletic, in both cases with a Malagasy clade excluding populations from southern Africa.

Phylogenetic relationships of the spider family Psechridae inferred from molecular data, with comments on the Lycosoidea (Arachnida : Araneae)

2013 ◽  
Vol 27 (1) ◽  
pp. 53 ◽  
Author(s):  
Steffen Bayer ◽  
Axel L. Schönhofer
Keyword(s):  
Close Relation ◽  
Molecular Data ◽  
Species Group ◽  
Coi Gene ◽  
Phylogenetic Position ◽  
Rrna Gene ◽  
28S Rrna ◽  
Juvenile Specimen ◽  
Species Groups ◽  
Morphological Species

We investigated the relative phylogenetic position of the spider genera Psechrus Thorell, 1878 and Fecenia Simon, 1887 comprising the family Psechridae Simon, 1890 within the order Araneae (plus 50 outgroup taxa) using molecular data of the nuclear 28S rRNA gene and the mitochondrial cytochrome c oxidase subunit I (COI) gene. We further revised the placement of genera formerly hypothesised in Psechridae and tested morphological species and species-group hypotheses recently proposed for Psechrus and Fecenia. Our results showed both genera as monophyletic and included within Lycosoidea but indicated no support for a monophyletic family Psechridae. Support for relationships to particular genera of other families (Lycosidae, Pisauridae) was found to be equally low. Previous removal of the genera Stiphidion Simon, 1902, Poaka Forster & Wilton, 1973, Tengella Dahl, 1901 (Metafecenia F. O. Pickard-Cambridge, 1902) and Themacrys Simon, 1906 from Psechridae is confirmed by recovering most of them outside Lycosoidea. For Tengella (part of Lycosoidea) a close relation to Psechridae is not supported. In the species-rich genus Psechrus, morphologically predefined species groups were generally recovered as monophyletic. COI information was applied to test the morphological species hypotheses for 28 Psechridae species, most of them represented by more than one specimen. Our analyses corroborated all proposed species and indicated COI as reliable for barcoding both Psechrus and Fecenia. COI enabled assignment of a juvenile specimen to Fecenia protensa, establishing the first species record for Brunei.

Phylogenetic systematics of day geckos, genus Phelsuma, based on molecular and morphological data (Squamata: Gekkonidae)

Zootaxa ◽  
2010 ◽  
Vol 2429 (1) ◽  
pp. 1 ◽  
Author(s):  
SARAH ROCHA ◽  
HERBERT RÖSLER ◽  
PHILIP-SEBASTIAN GEHRING ◽  
FRANK GLAW ◽  
DAVID POSADA ◽  
...  
Keyword(s):  
Molecular Markers ◽  
Morphological Characters ◽  
Molecular Data ◽  
Morphological Data ◽  
Species Assemblages ◽  
Rrna Gene ◽  
Phylogenetic Systematics ◽  
Multigene Phylogeny ◽  
Species Groups ◽  
The 16S Rrna Gene

We review the intrageneric systematics of day geckos, genus Phelsuma (Squamata: Sauria: Gekkonidae) in the light of a recently published multigene phylogeny, and provide an overview of 19 selected chromatic, morphological and behavioural characters for all currently recognized species and subspecies in the genus. To replace previous attempts of dividing the genus into phenetic species assemblages, we propose the following monophyletic species groups and summarize the morphological characters that partly support this grouping: Phelsuma barbouri group (P. barbouri, P. pronki); P. dubia group (P. berghofi, P. dubia, P. flavigularis, P. hielscheri, P. malamakibo, P. modesta, P. nigristriata, P. ravenala); P. mutabilis group (P. borai, P. breviceps, P. mutabilis); P. cepediana group (P. borbonica, P. cepediana, P. guentheri, P. guimbeaui, P. inexpectata, P. ornata, P. rosagularis as well as the extinct species P. edwardnewtonii and P. gigas); P. astriata group (P. astriata, P. sundbergi); P. madagascariensis group (P. abbotti, P. grandis, P. guttata, P. kochi, P. madagascariensis, P. parkeri, P. seippi and probably P. masohoala); P. lineata group (P. antanosy, P. comorensis, P. kely, P. lineata, P. pusilla, P. quadriocellata and probably P. hoeschi); P. laticauda group (P. laticauda, P. pasteuri, P. robertmertensi, P. v-nigra); P. klemmeri group (P. klemmeri); P. andamanense group (P. andamanense) and P. standingi group (P. standingi). Due to their equivocal placements based on different molecular markers, we refrain from assigning P. serraticauda and P. vanheygeni to any of these species groups at this time. We complement the molecular data with new trees based on partial sequences of the 16S rRNA gene for the P. madagascariensis- and P. lineata groups and propose to elevate P. lineata dorsivittata and P. quadriocellata parva to full species rank as P. dorsivittata and P. parva.

scholarly journals Systematic position and composition of Merodon nigritarsis and M. avidus groups (Diptera, Syrphidae) with a description of four new hoverflies species

2019 ◽  
Vol 89 (1) ◽  
pp. 74-125 ◽  
Author(s):  
Laura Likov ◽  
Ante Vujić ◽  
Nataša Kočiš Tubić ◽  
Mihajla Đan ◽  
Nevena Veličković ◽  
...  
Keyword(s):  
New Species ◽  
Molecular Data ◽  
Systematic Position ◽  
Species Group ◽  
Rrna Genes ◽  
Coi Gene ◽  
28S Rrna ◽  
Mitochondrial Coi ◽  
Diagnostic Key ◽  
Morphological And Molecular Data

The putative monophyly and systematic position of Merodon nigritarsis group was assessed based on morphological and molecular data of the mitochondrial COI and nuclear 28S rRNA genes. The previously reported concept of the group has been redefined, and M. crassifemoris Paramonov, 1925 is now excluded. The related M. avidus group is redefined here, including the Merodon avidus complex and M. femoratus Sack, 1913. Species delimitation of morphologically defined species of M. nigritarsis group was well supported by COI gene analysis, with the exception of M. alagoezicus Paramonov, 1925 and M. lucasi Hurkmans, 1993. Descriptions are given for three new species of the M. nigritarsis species group: Merodon cohurnus Vujić, Likov et Radenković sp. n., Merodon longisetus Vujić, Radenković et Likov sp. n. and Merodon obstipus Vujić, Radenković et Likov sp. n., and one new species from the M. avidus group: Merodon rutitarsis Likov, Vujić et Radenković sp. n. A lectotype is designated for M. femoratus Sack, 1913, and two new synonymies of this species were proposed: M. biarcuatus Curran, 1939 and M. elegans Hurkmans, 1993. Here we review 18 species from the M. nigritarsis group and six species from the M. avidus group and provide morphological diagnoses of the species groups. Additionally, diagnosis of 12 branches (groups or individual taxa) of M. avidus-nigritarsis lineage, an illustrated diagnostic key for the males, and distribution map are provided for the new species.

scholarly journals Description of Longidorus cheni sp. n. (Nematoda, Longidoridae) from China

ZooKeys ◽  
2018 ◽  
Vol 744 ◽  
pp. 1-18 ◽  
Author(s):  
Eda Marie Barsalote ◽  
Hoa Thi Pham ◽  
Stela Lazarova ◽  
Vlada Peneva ◽  
Jingwu Zheng
Keyword(s):  
New Species ◽  
Morphological Characters ◽  
Molecular Data ◽  
Rrna Genes ◽  
28S Rrna ◽  
Oral Aperture ◽  
Asiatic Origin ◽  
18S Rrna Genes ◽  
Guide Ring ◽  
Partial 18S

Longidoruschenisp. n., an amphimictic species recovered from the rhizosphere ofLarixprincipis-rupprechtiiandPyracanthafortuneanain Shanxi and Beijing, China, is described and illustrated. The taxonomic position ofL.chenisp. n.among other species within the genus was elucidated using morphometric and molecular data, and phylogenetic relationships were inferred using D2–D3 expansion domains of 28S and 18S rRNA genes by Bayesian Inference (BI) method. The new species is characterised by females with a medium body size (L = 4.9–6.6 mm), a lip region slightly expanded, broadly rounded frontally and laterally, the amphidial fovea broad and symmetrically bilobed at base, odontostyle long and slender (143–168 μm), odonthophore slightly swollen at the base, tail short bluntly conoid to rounded. Guide ring located far posterior from the oral aperture (70–93 μm). Males with two ad-cloacal pairs of supplements preceded by a row of 10–14 ventromedian supplements, with robust spicules measuring 111–126 μm along the median line. Three juvenile stages were present, tail shape of J1 elongate conoid while in J2 and J3 the tail gradually becomes bluntly rounded. Codes for identifying the new species are: A6-B3-C5-D2-E2-F3-G1-H1-I2-J2-K2.Longidoruschenisp. n.belongs to a group of species with a guide ring at the mid-odontostyle position that have a predominantly Asiatic origin. It differs from all of them by a combination of morphological characters and unique sequences of partial 18S and D2–D3 region of 28S rRNA genes. The percentage dissimilarities in partial 18S and D2–D3 28S rRNA genes ofL.chenito the closest species (L.litchii,L.fangi,L.jonesiandL.juglans) were 1.5 %–1.8 % and 16.8–18.3 %, respectively.

scholarly journals Revision of the Merodon serrulatus group (Diptera, Syrphidae)

ZooKeys ◽  
2020 ◽  
Vol 909 ◽  
pp. 79-158 ◽  
Author(s):  
Ante Vujić ◽  
Laura Likov ◽  
Snežana Radenković ◽  
Nataša Kočiš Tubić ◽  
Mihajla Djan ◽  
...  
Keyword(s):  
Species Group ◽  
Rrna Gene ◽  
28S Rrna ◽  
Key To Species ◽  
Type Specimens ◽  
Mitochondrial Coi ◽  
The Status ◽  
Morphological Diagnosis ◽  
Multiple Groups ◽  
New Synonymy

The phytophagous hoverfly genus Merodon Meigen, 1803 (Diptera, Syrphidae), which comprises more than 160 species distributed in Palaearctic and Afrotropical regions, can be differentiated into multiple groups of species that harbor high levels of hidden diversity. In this work, the serrulatus species group of Merodon is revised, providing an illustrated key to species, a detailed discussion on the taxonomic characters and a morphological diagnosis, including also the first data about the preimaginal morphology of this species group. The study includes characteristics of the 13 species of the M. serrulatus group, along with the available distributional data. Moreover, descriptions are provided for seven new species, namely M. defectus Vujić, Likov & Radenković sp. nov., M. disjunctus Vujić, Likov & Radenković sp. nov., M. medium Vujić, Likov & Radenković sp. nov., M. nigrocapillatus Vujić, Likov & Radenković sp. nov., M. nigropunctum Vujić, Likov & Radenković sp. nov., M. opacus Vujić, Likov & Radenković sp. nov., and M. trianguloculus Vujić, Likov & Radenković sp. nov. In addition, the taxa M. serrulatus (Wiedemann in Meigen, 1822), M. bequaerti Hurkmans, 1993, M. hirsutus Sack, 1913, M. kawamurae Matsumura, 1916, M. sacki (Paramonov, 1936) and M. sophron Hurkmans, 1993 are redefined and redescribed. Following a detailed study of the type material sourced from different entomological collections, the status of all available taxa related to M. serrulatus is revised and a new synonymy is proposed: M. tener Sack, 1913 syn. nov. (junior synonym of M. serrulatus). The identity of M. trizonus (Szilády, 1940) could not be assessed as the type specimens are lost. Thus, the name M. trizonus is considered as nomen dubium. The monophyly and composition of this species group are assessed through Maximum Parsimony and Maximum Likelihood analyses of the mitochondrial COI and nuclear 28S rRNA gene sequences.

Description of a new species of Auriculostoma (Digenea: Allocreadiidae) from Characidium heirmostigmata (Characiformes: Crenuchidae) from Argentina, using morphological and molecular data

2021 ◽  
Vol 95 ◽  
Author(s):  
M.M. Montes ◽  
J. Barneche ◽  
Y. Croci ◽  
D. Balcazar ◽  
A. Almirón ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
National Park ◽  
Molecular Data ◽  
Rrna Gene ◽  
28S Rrna ◽  
The Family ◽  
Parasitological Survey ◽  
Morphological And Molecular Data ◽  
A New Species

Abstract During a parasitological survey of fishes at Iguazu National Park, Argentina, specimens belonging to the allocreadiid genus Auriculostoma were collected from the intestine of Characidium heirmostigmata. The erection of the new species is based on a unique combination of morphological traits as well as on phylogenetic analysis. Auriculostoma guacurarii n. sp. resembles four congeneric species – Auriculostoma diagonale, Auriculostoma platense, Auriculostoma tica and Auriculostoma totonacapanensis – in having smooth and oblique testes, but can be distinguished by a combination of several morphological features, hosts association and geographic distribution. Morphologically, the new species can be distinguished from both A. diagonale and A. platense by the egg size (bigger in the first and smaller in the last); from A. tica by a shorter body length, the genital pore position and the extension of the caeca; and from A. totonacapanensis by the size of the oral and ventral sucker and the post-testicular space. Additionally, one specimen of Auriculostoma cf. stenopteri from the characid Charax stenopterus (Characiformes) from La Plata River, Argentina, was sampled and the partial 28S rRNA gene was sequenced. The phylogenetic analysis revealed that A. guacurarii n. sp. clustered with A. tica and these two as sister taxa to A. cf. stenopteri. The new species described herein is the tenth species in the genus and the first one parasitizing a member of the family Crenuchidae.

The North American Allies of Hylobius piceus (De Geer) (Coleoptera: Curculionidae)

1957 ◽  
Vol 89 (1) ◽  
pp. 37-43 ◽  
Author(s):  
Stephen L. Wood
Keyword(s):  
North American ◽  
Distinct Species ◽  
Morphological Characters ◽  
North American Species ◽  
Winged Form ◽  
The North ◽  
The Status ◽  
Field Workers ◽  
Dimorphic Species ◽  
Biological Differences

While investigating the biology of the North American species of Hypomolyx, field workers in Manitoba found a vestigial, or short-winged, and a long-winged form under apparently identical conditions in about equal numbers. Although biological differences were nor then apparent, there was doubt as to whether they were dealing with one dimorphic species or with two distinct species, A search for morphological characters brought to light numerous differences between the two forms, supporting the view that two species were present. These differences, a description the previously unrecognized species, and notes concerning the status of the genera Hylobius and Hypomolyx are reported below.

scholarly journals Occurrence and molecular characterization of cyst nematode species (Globodera spp.) associated with potato crops in Colombia

PLoS ONE ◽  
2021 ◽  
Vol 16 (7) ◽  
pp. e0241256
Author(s):  
Daniela Vallejo ◽  
Diego A. Rojas ◽  
John A. Martinez ◽  
Sergio Marchant ◽  
Claudia M. Holguin ◽  
...  
Keyword(s):  
Management Strategies ◽  
Nematode Species ◽  
Globodera Pallida ◽  
Rrna Gene ◽  
Potato Cyst Nematodes ◽  
28S Rrna ◽  
Cyst Nematodes ◽  
Nucleotide Substitutions ◽  
Internal Transcribed Spacer Region ◽  
The Status

Potato cyst nematodes (PCN) from the genus Globodera spp. cause major losses in the potato (Solanum tuberosum) industry worldwide. Despite their importance, at present little is known about the status of this plant pathogen in cultivated potatoes in Colombia. In this study, a total of 589 samples collected from 75 geographic localities in nine potato producing regions of Colombia (Cundinamarca, Boyacá, Antioquia, Nariño, Santander, Norte de Santander, Tolima, Caldas and Cauca) were assayed for the presence of potato cyst nematodes. Fifty-seven percent of samples tested positive for PCN. Based on phylogenetic analysis of the internal transcribed spacer region (ITS1-5.8S-ITS2) of the rRNA gene and D2-D3 expansion segments of the 28S rRNA gene, all populations but one were identified as Globodera pallida. Sequences of G. pallida from Colombia formed a monophyletic group closely related to Peruvian populations, with the lowest average number of nucleotide substitutions per site (Dxy = 0.002) and net nucleotide substitutions per site (Da = 0.001), when compared to G. pallida populations from Europe, South and North America. A single sample formed a well-supported subclade along with G. rostochiensis and G. tabacum from Japan, USA and Argentina. To our knowledge this is the first comprehensive survey of Globodera populations from Colombia that includes genetic data. Our findings on species diversity and phylogenetic relationships of Globodera populations from Colombia may help elucidate the status and distribution of Globodera species, and lead to the development of accurate management strategies for the potato cyst nematodes.

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