scholarly journals Genetic and phenotypic characterisation of animal, carcass, and meat quality traits from temperate and tropically adapted beef breeds. 2. Abattoir carcass traits

2003 ◽  
Vol 54 (2) ◽  
pp. 119 ◽  
Author(s):  
A. Reverter ◽  
D. J. Johnston ◽  
D. Perry ◽  
M. E. Goddard ◽  
H. M. Burrow
Keyword(s):  
Carcass Traits ◽  
Genetic Correlations ◽  
Subcutaneous Fat ◽  
Export Market ◽  
Additive Variance ◽  
Eye Muscle ◽  
Genotype By Environment Interactions ◽  
Genotype By Environment ◽  
Phenotypic Characterisation ◽  
Geographic Regions

A total of 11 abattoir carcass measures were recorded on 7854 carcasses in temperate (TEMP) and tropically adapted (TROP) beef breeds. Breeds for TEMP included Angus, Hereford, Murray Grey, and Shorthorn; Brahman, Belmont Red, and Santa Gertrudis accounted for TROP breeds. Measurements included carcass weight (CWT), retail beef yield percentage (RBY), intramuscular fat percentage (IMF), subcutaneous fat depth at the P8 site (P8) and at 12/13th rib (RIB), eye muscle length by width (ELW), deep butt temperature (DBTEMP), fat colour score (FATC), meat colour score (MEATC), marbling score (MARB), and carcass muscle score (MUSC). Animals were finished to 3 different market weight endpoints, either on pasture or in a feedlot, and in different geographic regions for the TROP breeds. Both the phenotypic and genetic expressions of the traits were estimated at each level of market weight endpoint and finishing regime. Heritabilities (h2), and genetic (rg) and phenotypic (rp) correlations between traits were estimated for TEMP and TROP separately. The design effects of market weight endpoint and finishing regimes were the most important sources of variation for continuously measured traits. Main effects for the scored traits were finishing regime for FATC and MEATC and market weight endpoint for MARB and MUSC. Feedlot finished cattle had the whitest FATC and the lightest MEATC. For TEMP, estimates of h2 for CWT, RBY, IMF, P8, RIB, ELW, DBTEMP, FATC, MEATC, MARB, and MUSC were 0.39, 0.57, 0.38, 0.36, 0.27, 0.30, 0.10, 0.05, 0.11, 0.17, and 0.14, respectively. In comparison, h2 for the same order of traits for TROP were 0.36, 0.50, 0.39, 0.30, 0.41, 0.32, 0.04, 0.09, 0.11, 0.25, and 0.11. The direction and magnitude of rg between traits were similar for TEMP and TROP, particularly between CWT, RBY, IMF, P8, and RIB. Genetic correlations of RBY were moderate and negative with all measures of fatness, including IMF (–0.38 TEMP and –0.43 TROP). Positive rg existed between all measures of fatness, with MARB and IMF close to unity. Negative rg was estimated between CWT and all fat measurements. Also negative were the rg and rp estimates between CWT and MEATC. For all traits in both TEMP and TROP, domestic weight carcasses exhibited lower additive variance than export market carcasses. However, genetic correlations between traits across market weight endpoints were positive and close to unity, with the exception of RBY for TROP. For TEMP breeds, genetic correlations between finishing regimes were close to unity. However, possible genotype by environment interactions were found for TROP for P8, MEATC, and MARB between finishing in different geographic regions, and between feedlot and pasture finished animals for RBY and MEATC. Genetic improvement of carcass traits is a possibility given the moderate heritabilities, moderate to strong genetic correlations, and little evidence of genotype by environment interactions.

scholarly journals Comparison of two live-animal ultrasound systems for genetic evaluation of carcass traits in Angus cattle

2021 ◽  
Author(s):  
C J Duff ◽  
J H J van der Werf ◽  
P F Parnell ◽  
S A Clark
Keyword(s):  
Carcass Traits ◽  
Genetic Correlations ◽  
Subcutaneous Fat ◽  
Genetic Evaluation ◽  
Ultrasound Scan ◽  
Ultrasound Scanning ◽  
Eye Muscle ◽  
Angus Cattle ◽  
Breeding Objective ◽  
Two Systems

Abstract The improvement of carcass traits is an important breeding objective in beef cattle breeding programs. The most common way of selecting for improvement in carcass traits is via indirect selection using ultrasound scanning of selection candidates which are submitted to genetic evaluation programs. Two systems used to analyse ultrasound images to predict carcass traits are the Pie Medical Esaote Aquila (PIE) and Central Ultrasound Processing (CUP). This study compared the ability of the two systems to predict carcass traits for genetic evaluation in Australian Angus cattle. Genetic and phenotypic parameters were estimated using data from 1648 Angus steers which were ultrasound scanned twice with both systems, first at feedlot entry and then following 100 days in the feedlot. The traits interpreted from ultrasound scanning included eye muscle area (EMA), rib fat (RIB) rump fat (RUMP) and intramuscular fat (IMF). Abattoir carcass data were collected on all steers following the full feedlot feeding period of 285 days. For all ultrasound scan traits, CUP resulted in higher phenotypic and genetic variances compared to the PIE. For IMF, CUP had higher heritability at feedlot intake (0.51 for CUP compared to 0.37 for PIE) and after 100 days feeding (0.54 for CUP compared to 0.45 PIE). CUP predicted IMF also tended to have stronger correlations with the breeding objective traits of carcass IMF marbling traits, both genetically (ranging from 0.59 to 0.75 for CUP compared to 0.45 to 0.63 for PIE) and phenotypically (ranging from 0.27 to 0.43 for CUP compared to 0.19 to 0.28 for PIE). Ultrasound scan EMA were the only group of traits in which the heritabilities were higher for PIE (0.52 for PIE compared to 0.40 for CUP at feedlot intake and 0.46 for PIE compared to 0.43 for CUP at 100 days of feeding), however with similar relationships to the breeding objective carcass EMA observed. For subcutaneous fat traits of ultrasound RIB and RUMP, the heritabilites and genetic correlations to the related carcass traits were similar, with the exception being the higher heritability observed for CUP predicted RUMP at feedlot intake at 0.52 compared to 0.38 for PIE. The results from this study indicates that the CUP system, compared to PIE, provides an advantage for genetic evaluation of carcass traits in Angus cattle, particularly for the IMF and associated marbling traits.

Genetic importance of fat and eye muscle depth in Merino breeding programs

2016 ◽  
Vol 56 (4) ◽  
pp. 690 ◽  
Author(s):  
D. J. Brown ◽  
A. A. Swan
Keyword(s):  
Carcass Traits ◽  
Genetic Correlations ◽  
Fibre Diameter ◽  
Economic Index ◽  
Parasite Resistance ◽  
Eye Muscle ◽  
Breeding Programs ◽  
Dual Purpose ◽  
Internal Parasite ◽  
Reproduction Traits

Australian Merino breeders have traditionally selected animals for breeding predominately on the basis of wool characteristics. Over recent decades, an increasing proportion of Merino breeders are interested in producing a ewe that can be used for prime-lamb production, but that also performs well for wool characteristics. Correlations between ultrasound carcass traits and other traits such as wool, internal parasite resistance and reproduction traits, are not very well known. The aims of this study were three-fold: (1) to estimate the genetic relationships between ultrasound carcass traits and wool, internal parasite resistance and reproduction traits, (2) to determine the value of recording ultrasound carcass traits in Merino breeding programs, and (3) to evaluate the impact of improving ewe genetic merit for fatness on their reproduction performance. Ultrasound fat and eye muscle depth had small to moderate genetic correlations with most traits, with positive correlations observed for bodyweight, fibre diameter, fibre curvature and reproduction, and negative correlations observed for fleece weight, fibre diameter coefficient of variation, worm egg count and breech wrinkle. As expected on the basis of these genetic correlations, estimated breeding values for fat depth of ewes had a positive association with their observed reproduction performance, but the effect explained only minimal variation in reproductive performance, and was extremely variable among flocks and years. A range of measurement scenarios was investigated for three standard MERINOSELECT indexes. Measuring fat and eye muscle depth resulted in 3%, 4% and 21% additional economic index gain for the fine, medium and dual purpose indexes, respectively, whereas measuring reproduction traits directly resulted in 17%, 27% and 45% additional gain in the economic index. Dual purpose index gains benefited more from measuring ultrasound carcass traits as it is the only index with a direct economic value placed on carcass traits. Measuring fat and eye muscle depth also resulted in a greater reduction in worm egg count. The results indicated that desirable genetic progress can be made in wool, ultrasound carcass, internal parasite resistance and number of lambs born and weaned simultaneously using multiple trait selection to account for the mix of favourable and unfavourable correlations between these traits. These results also demonstrated that the best method to maximise economic gain is to measure as many traits (or closely correlated traits) in the breeding objective as possible.

Genetic Parameters and Genotype-by-Environment Interactions in Regional Progeny Tests of Pinus taeda L. in the Southern USA

2020 ◽  
Author(s):  
Edwin Lauer ◽  
Andrew Sims ◽  
Steven McKeand ◽  
Fikret Isik
Keyword(s):  
Genetic Variation ◽  
Pinus Taeda ◽  
Genetic Parameters ◽  
Genetic Correlations ◽  
Breeding Program ◽  
Model Fit ◽  
Genotype By Environment Interactions ◽  
Genotype By Environment ◽  
Progeny Tests ◽  
Pinus Taeda L

Abstract Genetic parameters were estimated using a five-series multienvironment trial of Pinus taeda L. in the southern USA. There were 324 half-sib families planted in five test series across 37 locations. A set of six variance/covariance matrices for the genotype-by-environment (G × E) effect for tree height and diameter were compared on the basis of model fit. In single-series analysis, extended factor analytical models provided generally superior model fit to simpler models for both traits; however, in the combined-series analysis, diameter was optimally modeled using simpler variance/covariance structures. A three-way compound term for modeling G × E interactions among and within series yielded substantial improvements in terms of model fit and standard errors of predictions. Heritability of family means ranged between 0.63 and 0.90 for both height and diameter. Average additive genetic correlations among sites were 0.70 and 0.61 for height and diameter, respectively, suggesting the presence of some G × E interaction. Pairs of sites with the lowest additive genetic correlations were located at opposite ends of the latitude range. Latent factor regression revealed a small number of parents with large factor scores that changed ranks significantly between southern and northern environments. Study Implications Multienvironmental progeny tests of loblolly pine (Pinus taeda L.) were established over 10 years in the southern United States to understand the genetic variation for the traits of economic importance. There was substantial genetic variation between open-pollinated families, suggesting that family selection would be efficient in the breeding program. Genotype-by-environment interactions were negligible among sites in the deployment region but became larger between sites at the extremes of the distribution. The data from these trials are invaluable in informing the breeding program about the genetic merit of selection candidates and their potential interaction with the environment. These results can be used to guide deployment decisions in the southern USA, helping landowners match germplasm with geography to achieve optimal financial returns and conservation outcomes.

Genetic parameters for terminal sires estimated using data of progeny from Border Leicester × Merino ewes

1995 ◽  
Vol 46 (4) ◽  
pp. 703
Author(s):  
PA Kenney ◽  
ME Goddard ◽  
LP Thatcher
Keyword(s):  
Genetic Parameters ◽  
Selection Index ◽  
Genetic Correlations ◽  
Subcutaneous Fat ◽  
Muscle Area ◽  
Eye Muscle ◽  
Bone Length ◽  
Selection For ◽  
Using Data ◽  
Omental Fat

Three and a half thousand lambs from Border Leicester x Merino ewes mated to 133 sires from five Poll Dorset, one White Suffolk, one Siromt, two Meridale and four Merino studs were slaughtered, their carcasses halved and one side divided into six primals. Subcutaneous fat was dissected from all six primals, and bone from only the three rear primals. There were four slaughter groups: average slaughter weights of 30 and 35 kg for ewes and 35 and 45 kg for cryptorchids. Heritabilities and phenotypic and genetic correlations for all traits measured (>50) are published in an appendix. Where comparisons were available, estimates were similar to those for purebred animals. Genetic parameters for various assessments of fat were similar except for channel and omental fat. The GR fat depth was the best predictor for total subcutaneous fat, cannon bone length for total bone, and eye muscle area for total soft tissue. Carcass weight and GR appear to be the most important measurements for use in selection for breeding of sires for the prime lamb industry. Slaughter weight and fat depth at the C site could be used as suitable alternatives on live animals. Production of lean meat is not likely to be increased greatly by including measurements other than liveweight and GR in a selection index. Of the other measurements bone length and eye muscle measurements showed most promise.

Genetic parameters among growth and carcass traits of Canadian Charolais cattle

2004 ◽  
Vol 84 (4) ◽  
pp. 589-597 ◽  
Author(s):  
D. H. Crews ◽  
Jr., M. Lowerison ◽  
N. Caron ◽  
R. A. Kemp
Keyword(s):  
Fixed Effects ◽  
Genetic Parameters ◽  
Growth Traits ◽  
Carcass Traits ◽  
Genetic Correlations ◽  
Subcutaneous Fat ◽  
Field Performance ◽  
Pedigree Data ◽  
Marbling Score ◽  
Muscle Area

Genetic parameters for three growth and five carcass traits were estimated for Charolais using a combination of carcass progeny test, purebred field performance and pedigree data. Heritabilities and genetic and residual correlations were derived from variance components for birth weight (BWT, n = 54 221), 205-d weaning weight (WT205, n = 31 384), postweaning gain (PWG, n = 19 403), hot carcass weight (HCW, n = 6958), average subcutaneous fat thickness (FAT, n = 6866), longissimus muscle area (REA, n = 6863), marbling score (MAR, n = 6903) and estimated carcass lean yield percentage (PLY, n = 6852) with an animal model (n = 78 728) and restricted maximum likelihood. Breed of dam and contemporary group appropriate to each trait were included as fixed effects in the model, whereas random effects included direct genetic for all traits, maternal genetic for BWT and WT205, and maternal permanent environmental for WT205. Carcass traits were adjusted to a constant harvest age of 425 d. Heritability estimates of 0.53, 0.22, and 0.21 were obtained for direct components of BWT, WT205, and PWG, respectively, and maternal heritabilities were 0.16 and 0.10 for BWT and WT205, respectively. Direct × maternal genetic correlations for BWT (-0.49) and WT205 (-0.35) were negative. Heritabilities for HCW, FAT, REA, MAR, and PLY were 0.33, 0.39, 0.43, 0.34, and 0.46, respectively. Genetic correlations among direct effects for growth traits were moderately positive and generally uncorrelated with maternal effects across traits. Lean and fat deposition in the carcass generally had negative, unfavorable genetic correlations, although improvement in lean yield and marbling score may not be strongly antagonistic. Genetic correlations of direct and maternal components of growth traits with carcass traits suggested that selection for increased growth rate would not be antagonistic to improvement in carcass yield or meat quality. Key words: Carcass, Charolais, correlation, genetic parameters, growth

Genetic parameters for growth and carcass traits of Japanese Black (Wagyu) cattle

2000 ◽  
Vol 71 (1) ◽  
pp. 59-64 ◽  
Author(s):  
T. Oikawa ◽  
T. Sanehira ◽  
K. Sato ◽  
Y. Mizoguchi ◽  
H. Yamamoto ◽  
...  
Keyword(s):  
Body Weight ◽  
Genetic Parameters ◽  
Growth Traits ◽  
Average Daily Gain ◽  
Carcass Traits ◽  
Genetic Correlations ◽  
Subcutaneous Fat ◽  
Marbling Score ◽  
Data Set ◽  
Pooled Data

AbstractRestricted maximum likelihood analyses fitting an animal model were conducted to estimate genetic parameters with a pooled-data set of performance tests (growth traits and food intake) on 661 bulls and progeny tests (growth traits and carcass traits) on 535 steers. Traits studied included concentrate intake (CONC), roughage intake (ROU), TDN conversion (TCNV), TDN intake (TINT) of bulls; rib eye area (REA), marbling score (MARB), dressing proportion (DRES) and subcutaneous fat depth (SCF) of steers. Body weight at start (BWS), body weight at finish (BWF) and average daily gain (ADG) of all animals were measured. Estimated heritabilities were 0·18 (CONC), 0·71 (ROU), 0·11 (TCNV) and 0·36 (TINT); 0·02 (REA), 0·49 (MARB), 0·15 (DRES), 0·15 (SCF), and from 0·20 to 0·38 for growth traits. Genetic correlations of ROU were different from those of CONC, probably due to inconsistent restrictions on concentrate intake; those of TINT with the weights, ADG and SCF were high. MARB showed positive genetic correlations with growth traits and low correlations with TINT and SCF. High potentiality for improvement of marbling score was suggested.

scholarly journals Estimation of Genetic Correlations of Primal Cut Yields with Carcass Traits in Hanwoo Beef Cattle

Animals ◽  
2021 ◽  
Vol 11 (11) ◽  
pp. 3102
Author(s):  
Masoumeh Naserkheil ◽  
Deukmin Lee ◽  
Kihoon Chung ◽  
Mi Na Park ◽  
Hossein Mehrban
Keyword(s):  
Consumer Preferences ◽  
Carcass Traits ◽  
Genetic Correlations ◽  
Market Price ◽  
Marbling Score ◽  
Beef Industry ◽  
Genetic Progress ◽  
Muscle Area ◽  
Eye Muscle ◽  
Hanwoo Cattle

This study was carried out to estimate the variance components, heritability, and genetic correlations between the carcass traits and primal cut yields in Hanwoo cattle. Carcass traits comprising 5622 records included back fat thickness (BFT), carcass weight (CW), eye muscle area (EMA), and marbling score (MS). The 10 primal cut yields from 3467 Hanwoo steers included the tenderloin (TLN), sirloin (SLN), striploin (STLN), chuck (CHK), brisket (BSK), top round (TRD), bottom round (BRD), rib (RB), shank (SK), and flank (FK). In addition, three composite traits were formed by combining primal cut yields as novel traits according to consumer preferences and market price: high-value cuts (HVC), medium-value cuts (MVC), and low-value cuts (LVC). Heritability estimates for the interest of traits were moderate to high, ranging from 0.21 ± 0.04 for CHK to 0.59 ± 0.05 for MS. Except genetic correlations between RB and other primal cut traits, favorable and moderate to high correlations were observed among the yields of primal cut that ranged from 0.38 ± 0.14 (CHK and FK) to 0.93 ± 0.01 (TRD and BRD). Moreover, the estimated genetic correlations of CW and EMA with primal cut yields and three composite traits were positive and moderate to strong, except for BFT, which was negative. These results indicate that genetic progress can be achieved for all traits, and selection to increase the yields of primal cuts can lead to considerable profitability in the Hanwoo beef industry.

scholarly journals Analysis of genotype by environment interactions in a maize mapping population

2021 ◽  
Author(s):  
Asher I Hudson ◽  
Sarah G Odell ◽  
Pierre Dubreuil ◽  
Marie-Helene Tixier ◽  
Sebastien Praud ◽  
...  
Keyword(s):  
Genome Wide Association Study ◽  
Genetic Correlations ◽  
Genotype By Environment Interaction ◽  
Environment Interaction ◽  
Crop Breeding ◽  
Genotype By Environment Interactions ◽  
Genotype By Environment ◽  
Genome Wide ◽  
A Genome ◽  
Genetic Covariances

Genotype by environment interactions are a significant challenge for crop breeding as well as being important for understanding the genetic basis of environmental adaptation. In this study, we analyzed genotype by environment interaction in a maize multi-parent advanced generation intercross population grown across five environments. We found that genotype by environment interactions contributed as much as genotypic effects to the variation in some agronomically important traits. In order to understand how genetic correlations between traits change across environments, we estimated the genetic variance-covariance matrix in each environment. Changes in genetic covariances between traits across environments were common, even among traits that show low genotype by environment variance. We also performed a genome-wide association study to identify markers associated with genotype by environment interactions but found only a small number of significantly associated markers, possibly due to the highly polygenic nature of genotype by environment interactions in this population.

scholarly journals Partitioning variation in measurements of beef carcass traits using ultrasound1

2020 ◽  
Vol 4 (3) ◽  
Author(s):  
Bradie M Schmidt ◽  
Michael G Gonda ◽  
Michael D MacNeil
Keyword(s):  
Animal Models ◽  
Carcass Traits ◽  
Genetic Correlations ◽  
Subcutaneous Fat ◽  
Genetic Effects ◽  
Residual Variance ◽  
Phenotypic Variance ◽  
Contemporary Group ◽  
Genetic Evaluations ◽  
Additive Genetic Effects

Abstract Ultrasound technology provides cattle breeders with a quick, noninvasive, and inexpensive way to measure carcass data on live animals. Ultrasound data are used as indicator traits in cattle genetic evaluations for economically relevant carcass traits. Ultrasound cattle genetic evaluations assume homogeneous additive genetic and residual variance. Thus, the objective was to partition phenotypic variance in ultrasound carcass measurements into components for additive genetic effects, technicians, contemporary groups within technicians, and residual and to examine the homogeneity of these variances among image interpretation laboratories. Records of longissimus muscle area (LMA), percentage of intramuscular fat (IMF), and subcutaneous fat depth (SFD), measured using ultrasound, were provided by the American Angus Association (n = 65,967), American Hereford Association (n = 43,182), and American Simmental Association (n = 48,298). The data also included contemporary group, technician, imaging lab, and a three-generation pedigree for each animal. Variance components for ultrasound carcass measurements were first estimated with univariate animal models for each breed and imaging laboratory using derivative-free restricted maximum likelihood. Then, treating data from each imaging laboratory as separate traits, genetic correlations between laboratories for LMA, percentage of IMF, and subcutaneous fat were estimated with trivariate animal models. The technician explained 12–27%, 5–23%, and 4–26% of the variance for IMF, SFD, and LMA, respectively, across all three breeds. Variance due to technician was often greater than variance due to additive genetic effects but almost always less than that explained by the contemporary group. Within breeds, estimates of additive genetic variance for LMA, SFD, and IMF differed (range divided by mean) among laboratories by 4.5%, 21.5%, and 39.4 % (Angus); 31.6%, 15.0%, and 49.1% (Hereford); and 19.9%, 46.6%, and 55.3% (Simmental), respectively. Likewise, estimates of residual variance for LMA, SFD, and IMF differed among laboratories by 43.4%, 22.9%, and 43.3% (Angus); 24.9%, 15.2%, and 79.2% (Hereford); and 26.4%, 32.5%, and 46.2% (Simmental), respectively. Genetic correlations between labs across breeds ranged from 0.79 to 0.95 for IMF, 0.26 to 0.94 for SFD, and 0.78 to 0.98 for LMA. The impact of the observed heterogeneity of variance between labs on genetic evaluation requires further study.

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