Dynamics of water around the complex structures formed between the KH domains of far upstream element binding protein and single-stranded DNA molecules

Kaushik Chakraborty; Sanjoy Bandyopadhyay

doi:10.1063/1.4927568

Dynamics of water around the complex structures formed between the KH domains of far upstream element binding protein and single-stranded DNA molecules

The Journal of Chemical Physics ◽

10.1063/1.4927568 ◽

2015 ◽

Vol 143 (4) ◽

pp. 045106 ◽

Cited By ~ 6

Author(s):

Kaushik Chakraborty ◽

Sanjoy Bandyopadhyay

Keyword(s):

Binding Protein ◽

Complex Structures ◽

Dna Molecules ◽

Single Stranded Dna ◽

Element Binding Protein ◽

Upstream Element

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Thermodynamics of complex structures formed between single-stranded DNA oligomers and the KH domains of the far upstream element binding protein

The Journal of Chemical Physics ◽

10.1063/1.4952441 ◽

2016 ◽

Vol 144 (20) ◽

pp. 205105 ◽

Cited By ~ 3

Author(s):

Kaushik Chakraborty ◽

Sudipta Kumar Sinha ◽

Sanjoy Bandyopadhyay

Keyword(s):

Binding Protein ◽

Complex Structures ◽

Single Stranded Dna ◽

Dna Oligomers ◽

Element Binding Protein ◽

Upstream Element

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Correlated Conformational Motions of the KH Domains of Far Upstream Element Binding Protein Complexed with Single-Stranded DNA Oligomers

The Journal of Physical Chemistry B ◽

10.1021/acs.jpcb.5b01687 ◽

2015 ◽

Vol 119 (34) ◽

pp. 10998-11009 ◽

Cited By ~ 2

Author(s):

Kaushik Chakraborty ◽

Sanjoy Bandyopadhyay

Keyword(s):

Binding Protein ◽

Single Stranded Dna ◽

Dna Oligomers ◽

Element Binding Protein ◽

Upstream Element

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Faculty Opinions recommendation of Far upstream element-binding protein-1, a novel caspase substrate, acts as a cross-talker between apoptosis and the c-myc oncogene.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1163122.623786 ◽

2009 ◽

Author(s):

Stephen Schwartz

Keyword(s):

Binding Protein ◽

Myc Oncogene ◽

Element Binding Protein ◽

Upstream Element ◽

Caspase Substrate

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Isolation and characterization of the core single-stranded DNA-binding domain of purine-rich element binding protein B (Purβ)

Biochemical and Biophysical Research Communications ◽

10.1016/j.bbrc.2010.08.059 ◽

2010 ◽

Vol 400 (3) ◽

pp. 340-345 ◽

Cited By ~ 8

Author(s):

Amy E. Rumora ◽

Ashley N. Steere ◽

Jon E. Ramsey ◽

Anna M. Knapp ◽

Bryan A. Ballif ◽

...

Keyword(s):

Dna Binding ◽

Binding Protein ◽

Binding Domain ◽

Dna Binding Domain ◽

Single Stranded Dna ◽

The Core ◽

Isolation And Characterization ◽

Element Binding Protein ◽

Protein B

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Single Molecule Observation of Direct Transfer of Escherichia Coli Single-Strand Binding Protein (SSB) between Single-Stranded DNA Molecules

Biophysical Journal ◽

10.1016/j.bpj.2012.11.443 ◽

2013 ◽

Vol 104 (2) ◽

pp. 73a

Author(s):

I-Ren Lee ◽

Teckla Akinyi ◽

Taekjip Ha

Keyword(s):

Escherichia Coli ◽

Single Molecule ◽

Binding Protein ◽

Single Strand ◽

Direct Transfer ◽

Dna Molecules ◽

Single Stranded Dna

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Sendai virus-mediated gene transfer of the c-myc suppressor far-upstream element-binding protein-interacting repressor suppresses head and neck cancer

Gene Therapy ◽

10.1038/gt.2014.123 ◽

2015 ◽

Vol 22 (4) ◽

pp. 297-304 ◽

Cited By ~ 5

Author(s):

N Tanaka ◽

K Araki ◽

D Mizokami ◽

Y Miyagawa ◽

T Yamashita ◽

...

Keyword(s):

Head And Neck Cancer ◽

Gene Transfer ◽

Head And Neck ◽

Neck Cancer ◽

Sendai Virus ◽

Binding Protein ◽

Element Binding Protein ◽

Upstream Element

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MiR-16-1 Targeted Silences Far Upstream Element Binding Protein 1 to Advance the Chemosensitivity to Adriamycin in Gastric Cancer

Pathology & Oncology Research ◽

10.1007/s12253-017-0263-x ◽

2017 ◽

Vol 24 (3) ◽

pp. 483-488 ◽

Cited By ~ 10

Author(s):

Danyi Zhao ◽

Yang Zhang ◽

Lei Song

Keyword(s):

Gastric Cancer ◽

Binding Protein ◽

Element Binding Protein ◽

Upstream Element

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Far Upstream Element-Binding Protein 1

10.32388/balscn ◽

2020 ◽

Author(s):

Keyword(s):

Binding Protein ◽

Element Binding Protein ◽

Upstream Element

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Protein chemical identification and characterization of the human variants of far upstream element binding protein in medulloblastoma DAOY cell line

International Journal of Oncology ◽

10.3892/ijo.29.3.721 ◽

2006 ◽

Author(s):

Ephrem Engidawork ◽

Leila Afjehi-Sadat ◽

Jae-Won Yang ◽

Irene Slavc ◽

Gert Lubec

Keyword(s):

Cell Line ◽

Binding Protein ◽

Chemical Identification ◽

Daoy Cell ◽

Element Binding Protein ◽

Upstream Element ◽

Identification And Characterization

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Far upstream element binding protein 1: a commander of transcription, translation and beyond

Oncogene ◽

10.1038/onc.2012.350 ◽

2012 ◽

Vol 32 (24) ◽

pp. 2907-2916 ◽

Cited By ~ 61

Author(s):

J Zhang ◽

Q M Chen

Keyword(s):

Binding Protein ◽

Element Binding Protein ◽

Upstream Element

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