scholarly journals The carboxybiotin complex of pyruvate carboxylase. A kinetic analysis of the effects of Mg2+ ions on its stability and on its reaction with pyruvate

1984 ◽  
Vol 219 (1) ◽  
pp. 243-251 ◽  
Author(s):  
P V Attwood ◽  
J C Wallace ◽  
D B Keech

The enzyme-[14C] carboxybiotin complex of sheep liver pyruvate carboxylase was isolated and the reaction between this and pyruvate was studied by using the quenched-flow rapid-reaction technique. At 0.5 degrees C the reaction was 80% complete within 180 ms. The reaction was monophasic and obeyed pseudo-first-order kinetics. Increasing concentrations of Mg2+ caused a decrease in the magnitude of the observed pseudo-first-order rate constant. Throughout the carboxylation of pyruvate, the rate-limiting step of the reaction occurred after the dissociation of carboxybiotin from the first sub-site, whereas in the slow phase of the reaction with 2-oxobutyrate this dissociation is the rate-limiting step. It is possible, from the reaction scheme proposed, that the inhibition of overall enzymic activity by high concentrations of Mg2+ could be caused by the transfer of the carboxy group from biotin to pyruvate becoming rate-limiting. The efficacy of a substrate as a signal for the movement of carboxybiotin from the first sub-site is reflected by the amount that the effective affinity of the enzyme- carboxybiotin complex for Mg2+ is lowered. In the presence of the substrates tested, the affinities of the carboxybiotin complex can be arranged in order of increasing magnitude, i.e.: (formula; see text). The kinetics of the decay of the enzyme-[14C] carboxybiotin complex at 0 degree C in the absence of substrates are similar to the reaction with pyruvate except that the carboxybiotin is also unstable in the first sub-site, to some degree. This similarity allows for the proposal of a general scheme for the decarboxylation of the enzyme- carboxybiotin complex in the presence or in the absence of substrates.

1990 ◽  
Vol 68 (2) ◽  
pp. 476-479
Author(s):  
Donald C. Wigfield ◽  
Douglas M. Goltz

The kinetics of the reconstitution reaction of apotyrosinase with copper (II) ions are reported. The reaction is pseudo first order with respect to apoenzyme and the values of these pseudo first order rate constants are reported as a function of copper (II) concentration. Two copper ions bind to apoenzyme, and if the second one is rate limiting, the kinetically relevant copper concentration is the copper originally added minus the amount used in binding the first copper ion to enzyme. This modified copper concentration is linearly related to the magnitude of the pseudo first order rate constant, up to a copper concentration of 1.25 × 10−4 M (10-fold excess), giving a second order rate constant of 7.67 × 102 ± 0.93 × 102 M−1∙s−1.Key words: apotyrosinase, copper, tyrosinase.


1990 ◽  
Vol 55 (6) ◽  
pp. 1535-1540 ◽  
Author(s):  
Prerepa Manikyamba

Kinetics of oxidation of 1- and 2-acetylnaphthalenes by iodate in the presence of sulphuric acid in aqueous methanol has been studied. The reaction is first order with respect to both [iodate] and [acetylnaphthalene]. Solvent effect indicates a cation-dipole type of interaction in the rate limiting step. A mechanism is proposed with a slow attack of IO2+ on enol form of acetylnaphthalene forming an intermediate carbonium ion, which ultimately gives corresponding ω-hydroxyacetylnaphthalene. The higher reactivity of 2-acetyl isomer is attributed to the greater stability of the corresponding carbonium ion than that of 1-acetyl isomer.


1984 ◽  
Vol 36 ◽  
Author(s):  
Gary B. Bronner ◽  
James D. Plummer

ABSTRACTTo understand gettering action we have modeled the diffusion of metal to a backside getter. A first order model describing the diffusion of metals to an infinite backside sink is found not to fit experimental data. To fit the data for phosphorus gettering at 1000°C and argon implantation gettering at 800°C it is necessary to also hypothesize the injection of silicon interstitials. Assuming that the diffusion of the silicon interstitials is the rate limiting step in gettering, allows one to extract the diffusion coefficient and equilibrium concentration of the interstitial. The hypothesis of silicon interstitial injection agrees with recent work on phosphorus diffusion by Fahey et. al. To test this hypothesis for heavily damaged regions we have looked at the effect of an argon implanted region on the diffusion of a phosphorus buried layer. At both 800°C and 700°C, during nitrogen anneals we see significant enhancement of the phosphorus diffusion.


1986 ◽  
Vol 41 (1) ◽  
pp. 101-104 ◽  
Author(s):  
Cyril Párkányi ◽  
Mohammed A. Al-Salamah

Thermal decomposition of aromatic and heteroaromatic thioureas in boiling chlorobenzene is a first-order reaction. The reaction involves intramolecular hydrogen transfer followed by a cleavage of the C - N bond which is the rate-limiting step. The rate constants of decom position have been determined and correlated with quantum-chemical reactivity indices.


1986 ◽  
Vol 235 (2) ◽  
pp. 359-364 ◽  
Author(s):  
P V Attwood ◽  
J C Wallace

The enzyme-[14C]carboxybiotin complex of chicken liver pyruvate carboxylase has been isolated and shown to be relatively stable, with a half-life at 0 degree C of 342 min. The kinetic properties of the decay of this complex, in both the presence and the absence of the substrate analogue, 2-oxobutyrate, have been examined. The data for the reaction with 2-oxobutyrate at 0 degree C fitted a biphasic exponential decay curve, enabling the calculation of rate constants for both the fast and slow phases of the reaction at this temperature. The effect of temperature on the observed pseudo-first-order rate constant for the slow phase of the reaction with 2-oxobutyrate, and that for the decay of the enzyme-[14C]carboxybiotin complex alone, have been examined. Arrhenius plots of these data revealed that the processes being studied in each type of experiment were single reactions represented by one rate constant in each case. For the decay of the enzyme-[14C]carboxybiotin complex in the absence of 2-oxobutyrate, the rate-determining process may be the movement of carboxybiotin from the site of the first partial reaction to the site of the second. The calculated thermodynamic activation parameters indicate that this reaction is accompanied by a large change in protein conformation. With 2-oxobutyrate present, the observed process in the slow phase of the reaction was probably the dissociation of the carboxybiotin from the first subsite. Here, the activation parameters suggest that a much smaller change in protein conformation accompanies this reaction. Both sets of experiments were also performed in the presence of acetyl-CoA, but this activator had little effect on the measured thermodynamic activation parameters. However, in both cases the observed pseudo-first-order rate constants in the presence of acetyl-CoA were about 75% of those in its absence. The effects of Mg2+ on the reaction kinetics of the enzyme-[14C]carboxybiotin complex with 2-oxobutyrate were similar to those observed with the sheep enzyme by Goodall, Baldwin, Wallace & Keech [(1981) Biochem. J. 199, 603-609].


1974 ◽  
Vol 141 (1) ◽  
pp. 283-291 ◽  
Author(s):  
Kunio Hiwada ◽  
Ernst D. Wachsmuth

The enzymic properties of alkaline phosphatase (EC 3.1.3.1) from pig kidney brush-border membranes were studied. 1. It hydrolyses ortho- and pyro-phosphate esters, the rate limiting step (Vmax.) being independent of the substrate. It transphosphorylates to Tris at concentrations above 0.1m-Tris. 2. The pH optimum for hydrolysis was between 9.8 and 10. The pK of the enzyme–substrate complex is 8.7 for p-nitrophenyl phosphate and β-glycerophosphate. Excess of substrate inhibits the enzymic activity with decreasing pH. The pK of the substrate-inhibited enzyme–substrate complex, 8.7, is very similar to that for the enzyme–substrate complex. The pK values of the free enzyme appear to be 8.7 and 7.9. 3. Inactivation studies suggest that there is an essential tyrosine residue at the active centre of the enzyme. 4. The energy of activation (E) and the heat of activation (ΔH) at pH9.5 showed a transition at 24.8°C that was unaffected by Mg2+. 5. Kinetic and atomic-absorption analysis indicated the essential role of two Zn2+ ions/tetrameric enzyme for an ordered association of the monomers. Zn2+ in excess and other bivalent ions compete for a second site with Mg2+. Mg2+ enhances only the rate-limiting step of substrate hydrolysis. 6. Amino acid inhibition studies classified the pig kidney enzyme as an intermediate type of previously described alkaline phosphatases. It has more similarity with the enzyme from liver and bone than with that from placenta.


2018 ◽  
Vol 78 (1) ◽  
pp. 147-155 ◽  
Author(s):  
Nimra Ilyas ◽  
Sadia Ilyas ◽  
Sajjad-ur-Rahman ◽  
Sidra Yousaf ◽  
Aqsa Zia ◽  
...  

Abstract In the present study, biosorption behavior of a green filamentous alga, spirogyra in its native and modified states was investigated for copper removal from an electroplating industrial effluent. For this, the effluent containing 194 mg·L−1 Cu2+ in sulfate medium was contacted with both forms of spirogyra, under the parametric variations of effluent pH, adsorbent dosage, contact time, and sorption temperature. The study revealed spirogyra as a prominent candidate for removing contaminant metal cation; however, at the same condition, biosorption capacity of modified biomass in gel form was higher than the native spirogyra. At the optimized condition with 6 g sorbent dosage treated to 100 mL effluent for 30 min at pH 6.0 and temperature 20 °C, the maximum 82.8% and 96.4% copper could be adsorbed by the native and modified spirogyra, respectively. The batch sorption data using native biomass followed pseudo-first-order kinetic; exhibiting the multilayer sorption mechanism via surface diffusion could be defined by the Freundlich model. In contrast, the sulfuric acid treated modified spirogyra followed pseudo-second-order kinetics and intra particle diffusion as the rate-limiting step.


1973 ◽  
Vol 133 (1) ◽  
pp. 23-36 ◽  
Author(s):  
John C. Londesborough ◽  
Sung Ling Yuan ◽  
Leslie T. Webster

1. A constant molecular weight of 57000 was obtained by gel filtration of highly purified acetyl-CoA synthetase over a 1000-fold range of enzyme concentrations. The amino acid analysis is reported. 2. With native enzyme at 20°C the relatively rapid reaction of four thiol residues with p-hydroxymercuribenzoate caused an immediate inhibition reversible by either CoA or mercaptoethanol. Other substrates did not protect against this rapid inhibition. 3. The much slower reaction of the remaining four thiol residues was independent of the concentration of the mercurial, first-order with respect to enzyme, and had a large energy of activation (+136kJ/mol), suggesting that a conformation change in the protein was rate-limiting. This slow phase of the reaction was accompanied by an irreversible inactivation of the enzyme. 4. The effects of substrates on this irreversible inactivation at pH7.0 in 5 mm-MgCl2 indicated strong binding of ATP and pyrophosphate by the enzyme (concentrations for half-maximal effects, K½, were <30μm and <10μm respectively) and weaker binding of acetyl-CoA (K½ about 1 mm), AMP (K½ about 2mm) and acetate. In the presence of acetate, MgCl2 and p-hydroxymercuribenzoate, titration of the enzyme with ATP revealed at least two ATP binding sites/mol. 5. The experiments suggest that reaction of the thiol residues with mercurial causes loss of enzymic activity by altering the structure of the enzyme, rather than that the thiol residues play a direct role in the catalysis.


1978 ◽  
Vol 39 (02) ◽  
pp. 496-503 ◽  
Author(s):  
P A D’Amore ◽  
H B Hechtman ◽  
D Shepro

SummaryOrnithine decarboxylase (ODC) activity, the rate-limiting step in the synthesis of polyamines, can be demonstrated in cultured, bovine, aortic endothelial cells (EC). Serum, serotonin and thrombin produce a rise in ODC activity. The serotonin-induced ODC activity is significantly blocked by imipramine (10-5 M) or Lilly 11 0140 (10-6M). Preincubation of EC with these blockers together almost completely depresses the 5-HT-stimulated ODC activity. These observations suggest a manner by which platelets may maintain EC structural and metabolic soundness.


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