scholarly journals The molecular weight and thiol residues of acetyl-coenzyme A synthetase from ox heart mitochondria

1973 ◽  
Vol 133 (1) ◽  
pp. 23-36 ◽  
Author(s):  
John C. Londesborough ◽  
Sung Ling Yuan ◽  
Leslie T. Webster
Keyword(s):  
Molecular Weight ◽  
Binding Sites ◽  
Gel Filtration ◽  
Enzymic Activity ◽  
Slow Phase ◽  
Conformation Change ◽  
Acetyl Coa ◽  
Direct Role ◽  
First Order ◽  
Rate Limiting

1. A constant molecular weight of 57000 was obtained by gel filtration of highly purified acetyl-CoA synthetase over a 1000-fold range of enzyme concentrations. The amino acid analysis is reported. 2. With native enzyme at 20°C the relatively rapid reaction of four thiol residues with p-hydroxymercuribenzoate caused an immediate inhibition reversible by either CoA or mercaptoethanol. Other substrates did not protect against this rapid inhibition. 3. The much slower reaction of the remaining four thiol residues was independent of the concentration of the mercurial, first-order with respect to enzyme, and had a large energy of activation (+136kJ/mol), suggesting that a conformation change in the protein was rate-limiting. This slow phase of the reaction was accompanied by an irreversible inactivation of the enzyme. 4. The effects of substrates on this irreversible inactivation at pH7.0 in 5 mm-MgCl2 indicated strong binding of ATP and pyrophosphate by the enzyme (concentrations for half-maximal effects, K½, were <30μm and <10μm respectively) and weaker binding of acetyl-CoA (K½ about 1 mm), AMP (K½ about 2mm) and acetate. In the presence of acetate, MgCl2 and p-hydroxymercuribenzoate, titration of the enzyme with ATP revealed at least two ATP binding sites/mol. 5. The experiments suggest that reaction of the thiol residues with mercurial causes loss of enzymic activity by altering the structure of the enzyme, rather than that the thiol residues play a direct role in the catalysis.

scholarly journals The carboxybiotin complex of pyruvate carboxylase. A kinetic analysis of the effects of Mg2+ ions on its stability and on its reaction with pyruvate

1984 ◽  
Vol 219 (1) ◽  
pp. 243-251 ◽  
Author(s):  
P V Attwood ◽  
J C Wallace ◽  
D B Keech
Keyword(s):  
Pyruvate Carboxylase ◽  
General Scheme ◽  
Order Rate Constant ◽  
Enzymic Activity ◽  
Slow Phase ◽  
First Order ◽  
Rate Limiting Step ◽  
Limiting Step ◽  
Pseudo First Order ◽  
Rate Limiting

The enzyme-[14C] carboxybiotin complex of sheep liver pyruvate carboxylase was isolated and the reaction between this and pyruvate was studied by using the quenched-flow rapid-reaction technique. At 0.5 degrees C the reaction was 80% complete within 180 ms. The reaction was monophasic and obeyed pseudo-first-order kinetics. Increasing concentrations of Mg2+ caused a decrease in the magnitude of the observed pseudo-first-order rate constant. Throughout the carboxylation of pyruvate, the rate-limiting step of the reaction occurred after the dissociation of carboxybiotin from the first sub-site, whereas in the slow phase of the reaction with 2-oxobutyrate this dissociation is the rate-limiting step. It is possible, from the reaction scheme proposed, that the inhibition of overall enzymic activity by high concentrations of Mg2+ could be caused by the transfer of the carboxy group from biotin to pyruvate becoming rate-limiting. The efficacy of a substrate as a signal for the movement of carboxybiotin from the first sub-site is reflected by the amount that the effective affinity of the enzyme- carboxybiotin complex for Mg2+ is lowered. In the presence of the substrates tested, the affinities of the carboxybiotin complex can be arranged in order of increasing magnitude, i.e.: (formula; see text). The kinetics of the decay of the enzyme-[14C] carboxybiotin complex at 0 degree C in the absence of substrates are similar to the reaction with pyruvate except that the carboxybiotin is also unstable in the first sub-site, to some degree. This similarity allows for the proposal of a general scheme for the decarboxylation of the enzyme- carboxybiotin complex in the presence or in the absence of substrates.

scholarly journals Human plasma uridine diphosphate galactose-glycoprotein galactosyltransfertase. Purification, properties and kinetics of the enzyme-catalysed reaction

1977 ◽  
Vol 167 (3) ◽  
pp. 621-628 ◽  
Author(s):  
A Bella ◽  
J S Whitehead ◽  
Y S Kim
Keyword(s):  
Molecular Weight ◽  
Human Plasma ◽  
Gel Filtration ◽  
Amino Sugar ◽  
Enzymic Activity ◽  
Transferase Activity ◽  
Uridine Diphosphate ◽  
Absolute Requirement ◽  
Km Value ◽  
Alpha Lactalbumin

The soluble galactosyltransferase of human plasma catalysed the transfer of galactose from UDP-galactose to high- and low-molecular-weight derivatives of N-acetylglucosamine, forming a beta-1-4 linkage. The enzyme was purified by using (NH4)2SO4 precipitation and affinity chromatography on an alpha-lactalbumin-Sepharose column. The galactosyltransferase was maximally bound to this column in the presence of N-acetylglucosamine, and the enzyme was eluted by omitting the amino sugar from the developing buffer. The molecular weight of the enzyme was estimated to be 85000 by gel filtration. The assay conditions for optimum enzymic activity was 30 degrees C and pH7.5. Mn2+ ion was found to be an absolute requirement for transferase activity. The Km for Mn2+ was 0.4 mM and that for the substrate, UDP-galactose, was 0.024 mM. The Km for the acceptors was 0.21 mM for alpha1-acid glycoprotein and 3.9 mM for N-acetylglucosamine. In the presence of alpha-lactalbumin, glucose became a good acceptor for the enzyme and had a Km value of 2.9 mM. Results of the kinetic study indicated that the free enzyme reacts with Mn2+ under conditions of thermodynamic equilibrium, and the other substrates are added sequentially.

scholarly journals Synthesis of pyruvate carboxylase from its apoenzyme and (+)-biotin in Bacillus stearothermophilus. Purification and properties of the apoenzyme and the holoenzyme synthetase

1971 ◽  
Vol 122 (5) ◽  
pp. 653-661 ◽  
Author(s):  
J. J. Cazzulo ◽  
T. K. Sundaram ◽  
Susan N. Dilks ◽  
H. L. Kornberg
Keyword(s):  
Molecular Weight ◽  
Electrophoretic Mobility ◽  
Pyruvate Carboxylase ◽  
Bacillus Stearothermophilus ◽  
Gel Filtration ◽  
Homogeneous State ◽  
Holocarboxylase Synthetase ◽  
Acetyl Coa ◽  
Purification And Properties

1. Methods are described for the assay and purification of pyruvate apocarboxylase and pyruvate holocarboxylase synthetase from biotin-deficient Bacillus stearothermophilus. 2. Pyruvate apocarboxylase was obtained 200-fold purified and in a nearly homogeneous state; it closely resembled the holoenzyme of the thermophile in fractionation properties, electrophoretic mobility and molecular weight (estimated to be 350000 by gel filtration). 3. Pyruvate holocarboxylase synthetase, purified more than 50-fold, was estimated to have a molecular weight of approx. 40000. 4. The conversion of the purified apoenzyme into the holoenzyme required the presence of the synthetase, ATP (Km3.3×10−7m), (+)-biotin (Km7.5×10−8m) and Mg2+; it differed from the conversions effected by systems forming other carboxylases in mesophilic organisms in also requiring the presence of acetyl-CoA.

scholarly journals THE SUBUNITS IN RABBIT ANTI-FORSSMAN IGM ANTIBODY

1968 ◽  
Vol 127 (5) ◽  
pp. 967-982 ◽  
Author(s):  
Michael M. Frank ◽  
John H. Humphrey
Keyword(s):  
Molecular Weight ◽  
Binding Sites ◽  
Density Gradient Centrifugation ◽  
Gradient Centrifugation ◽  
Sheep Erythrocyte ◽  
Gel Filtration ◽  
Isolation Procedure ◽  
Multiple Binding Sites ◽  
Multiple Binding ◽  
Forssman Antibody

Rabbit IgM anti-Forssman antibody was highly purified and the subunits obtained on reduction and alkylation were labeled radioactively and isolated by two different and unrelated methods. In both cases the subunits were found to have a molecular weight of about 90,000, based on their behavior on density gradient centrifugation and gel filtration, and evidence is given that they contained one light and one heavy chain. The subunits bound only weakly to sheep erythrocyte stroma, and only half could be shown to possess antigen specific sites. The data are consistent with the concept that each anti-Forssman IgM molecule has five effective binding sites, but it is uncertain whether the ineffectiveness of the remaining five H-L chain pairs is inherent in the structure of the IgM molecule or an artifact due to the isolation procedure. Intact IgM anti-Forssman antibody binds very firmly to structures containing multiple repeating antigen sites, and it appears that this is due to the presence of multiple binding sites on the molecule.

scholarly journals An enzyme-bound intermediate in the biosynthesis of 3-hydroxy-3-methylglutaryl-coenzyme A

1974 ◽  
Vol 137 (1) ◽  
pp. 15-23 ◽  
Author(s):  
B. Middleton ◽  
P. K. Tubbs
Keyword(s):  
Exchange Rate ◽  
Rate Constant ◽  
Gel Filtration ◽  
Order Rate Constant ◽  
Burst Release ◽  
Radioactive Product ◽  
Acetyl Coa ◽  
First Order ◽  
Acetyl Group ◽  
Derivatives Of

1. Purified 3-hydroxy-3-methylglutaryl-CoA synthase from baker's yeast (free from acetoacetyl-CoA thiolase activity) catalysed an exchange of acetyl moiety between 3′-dephospho-CoA and CoA. The exchange rate was comparable with the overall velocity of synthesis of 3-hydroxy-3-methylglutaryl-CoA. 2. Acetyl-CoA reacted with the synthase, giving a rapid ‘burst’ release of CoA proportional in amount to the quantity of enzyme present. The ‘burst’ of CoA was released from acetyl-CoA, propionyl-CoA and succinyl-CoA (3-carboxypropionyl-CoA) but not from acetoacetyl-CoA, hexanoyl-CoA, dl-3-hydroxy-3-methylglutaryl-CoA, or other derivatives of glutaryl-CoA. 3. Incubation of 3-hydroxy-3-methylglutaryl-CoA synthase with [1-14C]acetyl-CoA yielded protein-bound acetyl groups. The Keq. for the acetylation was 1.2 at pH7.0 and 4°C. Acetyl-labelled synthase was isolated free from [1-14C]acetyl-CoA by rapid gel filtration at pH6.1. The [1-14C]acetyl group was removed from the protein by treatment with hydroxylamine, CoA or acetoacetyl-CoA but not by acid. When CoA or acetoacetyl-CoA was present the radioactive product was [1-14C]acetyl-CoA or 3-hydroxy-3-methyl-[14C]glutaryl-CoA respectively. 4. The isolated [1-14C]acetyl-enzyme was slowly hydrolysed at pH6.1 and 4°C with a first-order rate constant of 0.005min-1. This rate could be stimulated either by raising the pH to 7.0 or by the addition of desulpho-CoA. 5. These properties are interpreted in terms of a mechanism in which 3-hydroxy-3-methyl-glutaryl-CoA synthase is acetylated by acetyl-CoA to give a stable acetyl-enzyme, which then condenses with acetoacetyl-CoA yielding a covalent derivative between 3-hydroxy-3-methylglutaryl-CoA and the enzyme which is then rapidly hydrolysed to free enzyme and product.

scholarly journals The carboxybiotin complex of chicken liver pyruvate carboxylase. A kinetic analysis of the effects of acetyl-CoA, Mg2+ ions and temperature on its stability and on its reaction with 2-oxobutyrate

1986 ◽  
Vol 235 (2) ◽  
pp. 359-364 ◽  
Author(s):  
P V Attwood ◽  
J C Wallace
Keyword(s):  
Rate Constant ◽  
Rate Constants ◽  
Protein Conformation ◽  
Pyruvate Carboxylase ◽  
Activation Parameters ◽  
Slow Phase ◽  
Acetyl Coa ◽  
First Order ◽  
Thermodynamic Activation Parameters ◽  
Pseudo First Order

The enzyme-[14C]carboxybiotin complex of chicken liver pyruvate carboxylase has been isolated and shown to be relatively stable, with a half-life at 0 degree C of 342 min. The kinetic properties of the decay of this complex, in both the presence and the absence of the substrate analogue, 2-oxobutyrate, have been examined. The data for the reaction with 2-oxobutyrate at 0 degree C fitted a biphasic exponential decay curve, enabling the calculation of rate constants for both the fast and slow phases of the reaction at this temperature. The effect of temperature on the observed pseudo-first-order rate constant for the slow phase of the reaction with 2-oxobutyrate, and that for the decay of the enzyme-[14C]carboxybiotin complex alone, have been examined. Arrhenius plots of these data revealed that the processes being studied in each type of experiment were single reactions represented by one rate constant in each case. For the decay of the enzyme-[14C]carboxybiotin complex in the absence of 2-oxobutyrate, the rate-determining process may be the movement of carboxybiotin from the site of the first partial reaction to the site of the second. The calculated thermodynamic activation parameters indicate that this reaction is accompanied by a large change in protein conformation. With 2-oxobutyrate present, the observed process in the slow phase of the reaction was probably the dissociation of the carboxybiotin from the first subsite. Here, the activation parameters suggest that a much smaller change in protein conformation accompanies this reaction. Both sets of experiments were also performed in the presence of acetyl-CoA, but this activator had little effect on the measured thermodynamic activation parameters. However, in both cases the observed pseudo-first-order rate constants in the presence of acetyl-CoA were about 75% of those in its absence. The effects of Mg2+ on the reaction kinetics of the enzyme-[14C]carboxybiotin complex with 2-oxobutyrate were similar to those observed with the sheep enzyme by Goodall, Baldwin, Wallace & Keech [(1981) Biochem. J. 199, 603-609].

scholarly journals Purification and mechanistic properties of an extracellular α-l-arabinofuranosidase from Monilinia fructigena

1987 ◽  
Vol 245 (3) ◽  
pp. 843-849 ◽  
Author(s):  
M A Kelly ◽  
M L Sinnott ◽  
M Herrchen
Keyword(s):  
Ring Opening ◽  
Gel Filtration ◽  
Bond Breaking ◽  
Absolute Rate ◽  
Monilinia Fructigena ◽  
First Order ◽  
A Value ◽  
Leaving Group ◽  
Rate Limiting ◽  
Hydrolysis Of

1. The alpha-L-arabinofuranosidase isoenzyme designated AFIII [Laborda, Archer, Fielding & Byrde (1974) J. Gen. Microbiol. 81, 151-163] was purified by sequential isoelectric focusing, hydrophobic chromatography, gel filtration and chromatofocusing. 2. The enzyme is a monomer of Mr 40,000. 3. On inactivation of the enzyme with 3H-labelled 1-alpha-L-arabinofuranosylmethyl-3-p-nitrophenyltriazene, 0.64 mol of alpha-L-arabinofuranosylmethyl residues/mol of enzyme is estimated to become attached to protein. 5. Neither first-order nor second-order rate constants for hydrolyses of aryl alpha-L-arabinofuranosides are dependent upon leaving-group acidity [beta lg(V) = −0.16 +/− 0.11; Beta lg(V/K) = −0.11 +/- 0.07; n = 7; delta pKa = 4.5] 6. Bond-breaking is nonetheless rate-limiting, as is shown by a value of 18(V) of 1.030 +/− 0.007 for the hydrolysis of p-nitrophenyl arabinoside. 7. Proton-donation to the leaving group is thus far advanced at the rate-limiting transition state for this enzyme. 8. Four alpha-L-arabinofuranosyl pyridinium salts are substrates, and an approximate beta lg(V) value of −0.9 can be estimated. 9. The absolute rate enhancement with the 4-bromoisoquinolinium salt, 2.5 × 10(9), is comparable with that observed with pyranosidases. 10. Ring-opening mechanisms can therefore be dismissed, even though they are known in the acid-catalysed hydrolysis of arabinofuranosides.

scholarly journals Characteristics of β-galactosidase in the mucosa of the small intestine of infant rats. Physicochemical properties

1969 ◽  
Vol 114 (3) ◽  
pp. 621-627 ◽  
Author(s):  
Jiří Kraml ◽  
Otakar Koldovský ◽  
Aleša Heringová ◽  
Věra Jirsová ◽  
Karel Kácl ◽  
...  
Keyword(s):  
Molecular Weight ◽  
Small Intestine ◽  
Bovine Serum Albumin ◽  
Gel Filtration ◽  
Heat Inactivation ◽  
Urea Treatment ◽  
First Order ◽  
First Order Kinetics ◽  
Infant Rats ◽  
Minimal Molecular Weight

1. The characteristics of acid and neutral β-galactosidases isolated chromatographically from homogenates of the mucosa of the jejunum and ileum of suckling rats were studied. 2. The minimal molecular weight of the acid β-galactosidase, as estimated by gel filtration on Sephadex G-200, was in the range 83000–105000, whereas for the neutral β-galactosidase the estimated molecular weight was in the range 360000–510000. 3. The acid and neutral β-galactosidases were inhibited competitively by galactono-(1→4)-lactone, with respective Ki values of 0·15mm and 1·1mm. Only the acid β-galactosidase was inhibited competitively by sodium galactonate (Ki 0·17mm). 4. Heat inactivation of both β-galactosidases occurred according to first-order kinetics. The neutral enzyme was more labile, but bovine serum albumin protected acid enzyme only. 5. Urea treatment inactivated both β-galactosidases, the neutral β-galactosidase being more sensitive than the acid β-galactosidase. 6. No differences were found between preparations from the jejunum and ileum.

Physico-Chemical Properties of Recombinant Desulphatohirudin

1990 ◽  
Vol 63 (03) ◽  
pp. 499-504 ◽  
Author(s):  
A Electricwala ◽  
L Irons ◽  
R Wait ◽  
R J G Carr ◽  
R J Ling ◽  
...  
Keyword(s):  
Molecular Weight ◽  
Gel Filtration ◽  
Chemical Properties ◽  
Alpha Helix ◽  
Apparent Molecular Weight ◽  
Correlation Spectroscopy ◽  
Nmr Studies ◽  
Recombinant Hirudin ◽  
Physico Chemical ◽  
Recombinant Molecule

SummaryPhysico-chemical properties of recombinant desulphatohirudin expressed in yeast (CIBA GEIGY code No. CGP 39393) were reinvestigated. As previously reported for natural hirudin, the recombinant molecule exhibited abnormal behaviour by gel filtration with an apparent molecular weight greater than that based on the primary structure. However, molecular weight estimation by SDS gel electrophoresis, FAB-mass spectrometry and Photon Correlation Spectroscopy were in agreement with the theoretical molecular weight, with little suggestion of dimer or aggregate formation. Circular dichroism studies of the recombinant molecule show similar spectra at different pH values but are markedly different from that reported by Konno et al. (13) for a natural hirudin-variant. Our CD studies indicate the presence of about 60% beta sheet and the absence of alpha helix in the secondary structure of recombinant hirudin, in agreement with the conformation determined by NMR studies (17)

Isolation and Characterization of Plasminogen Activator from Pig Leucocytes

1974 ◽  
Vol 31 (01) ◽  
pp. 072-085 ◽  
Author(s):  
M Kopitar ◽  
M Stegnar ◽  
B Accetto ◽  
D Lebez
Keyword(s):  
Molecular Weight ◽  
Plasminogen Activator ◽  
Gel Electrophoresis ◽  
Gel Filtration ◽  
Ph Optimum ◽  
Isolation And Characterization ◽  
Ph Range ◽  
Inhibition Studies ◽  
Final Purification

SummaryPlasminogen activator was isolated from disrupted pig leucocytes by the aid of DEAE chromatography, gel filtration on Sephadex G-100 and final purification on CM cellulose, or by preparative gel electrophoresis.Isolated plasminogen activator corresponds No. 3 band of the starting sample of leucocyte cells (that is composed from 10 gel electrophoretic bands).pH optimum was found to be in pH range 8.0–8.5 and the highest pH stability is between pH range 5.0–8.0.Inhibition studies of isolated plasminogen activator were performed with EACA, AMCHA, PAMBA and Trasylol, using Anson and Astrup method. By Astrup method 100% inhibition was found with EACA and Trasylol and 30% with AMCHA. PAMBA gave 60% inhibition already at concentration 10–3 M/ml. Molecular weight of plasminogen activator was determined by gel filtration on Sephadex G-100. The value obtained from 4 different samples was found to be 28000–30500.

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