scholarly journals Specific reduction of carboxyl groups in peptides and proteins by diborane

1969 ◽  
Vol 111 (4) ◽  
pp. 593-601 ◽  
Author(s):  
M. Z. Atassi ◽  
Arthur F. Rosenthal

1. The reaction of several peptides and proteins with diborane was studied under different conditions to determine those most suitable for the specific reduction of carboxyl groups. 2. In the reaction of model peptides and the cyclic peptides bacitracin and tyrocidin, reduction at 0° was entirely specific for the carboxyl groups without affecting the peptide bonds. Acid amide residues were not reduced. Some tripeptides showed anomalous results in that the C-terminal residue was quite resistant to reduction. 3. Specific reduction of carboxyl groups was achieved in each of the following proteins: human serum albumin, egg albumin, adult human haemoglobin, sperm-whale apomyoglobin, horse heart cytochrome c and egg-white lysozyme. The C-terminal amino acid was usually reduced. 4. Conditions for specific reduction of all available carboxyl groups are not easily found and may vary from one substance to another. Specific reduction of a limited number of available carboxyl groups may be generally accomplished by reactions at −10°. 5. It is suggested that this chemical modification, which has the advantage of permanence, may be useful in studying the role of carboxyl groups in the conformation of proteins and in the biological properties of peptides and proteins.

A brief account is given of the development of our knowledge of certain aspects of cytochrome c since its early preparations from baker’s yeast, on which the fundamental properties of this haemoprotein were established. In view of the extensive work which is now being carried out on cytochromes of group c isolated from different organisms, it was found impor­tant to re-investigate certain properties of cytochrome c which can easily be prepared from mammalian heart muscle and purified to 0.45 % Fe. The absorption spectra of oxidized (Fe 3+ ) and reduced (Fe 2+ ) cytochrome c (at pH 6.8, 13 and 14) and of their compounds with ligands such as CO (Fe 2+ ), CN' (Fe 2+ and Fe 3+ ), N' 3 (Fe 3+ ), NO (Fe 2+ and Fe 3+ ) and F'(Fe 3+ ) were re-determined and uniformly presented. Marked intensification of the Soret- and α-bands of ferro-cytochrome c was observed at pH14. Although CN'- and N' 3 -ferri-cytochrome c are formed within the physiological range of pH, they play no part in cyanide or azide inhibition of cell respiration or of the catalytic activity of the respiratory chain in the heart muscle preparation. Nitric oxide reacts with both ferri- and ferro-cytochrome c forming two spectroscopically distinct compounds: I and II analogous to compounds of NO with methaemoglobin and haemoglobin respectively. The nature of these compounds is discussed in relation to the view recently put forward that compound I, which was found to be diamagnetic, has a ferro-cytochrome c nitrosyl structure. The inability of ferro-cytochrome c to react with O 2 and ligands (CO, CN ' and NO) within the physiological range of pH, is due not only to the embedded position of the haem within the fold of the protein, to which it is linked both by its iron and porphyrin side chains (2 and 4), but also to the strong affinity of the divalent iron for the nitrogenous groups of the protein, as well as to the nature of the protein fold which exerts greater steric hindrance to ligands in ferro- than in ferri-cytochrome c . This is in agreement with the view that the tertiary protein structure is more open in ferri- than in ferro-cytochrome c . Criteria of the purity of cytochrome c were re-examined in the light of recent work on its purification. The thermostability of cytochrome c recognized during the early study of this compound was further investigated. It was found that ferro-cytochrome c in solutions at pH 9.1 to 10.2, containing carbon monoxide or cyanide, when heated to 100 °C becomes completely con­verted into the corresponding CO- or CN'-derivative, which, on cooling, immediately dissociate; up to 80% of heat-denatured cytochrome c was found to revert to the original native state. The striking similarities of yeast and mammalian cytochrome c in all their properties, including their equally successful incorporation within the cytochrome c deficient heart muscle succinic oxidase system, contrasts with the marked dissimilarities in the structures of their haemopeptide cores, which were found to differ in the contents and sequences of five of their eleven amino acids. Similar discrepancies between the primary protein structures and the biological properties have recently been recorded for the α and β peptide chains of human haemoglobin and the single chain of sperm whale myoglobin. The effect of the valency of iron on the general properties of protein of cytochrome c and of other haemoproteins is discussed.


1986 ◽  
Vol 236 (2) ◽  
pp. 359-364 ◽  
Author(s):  
B E Corthésy ◽  
C J A Wallace

Cytochrome c binds certain physiological anions that are known to modulate the biological properties of the protein, although it is not known whether this effect is fortuitous or has physiological significance. We have examined the ability of the protein and its semisynthetic analogues to associate with certain of these anions, e.g. ATP, ADP, Pi and citrate. Our results show that specific residues or clusters of residues on the surface of horse heart cytochrome c are involved in the recognition sites for these anions. We also observed that binding at one site is linked to the oxidation state of the protein.


2021 ◽  
Vol 22 (19) ◽  
pp. 10551
Author(s):  
Francesca Sacco ◽  
Matteo Tarchi ◽  
Giarita Ferraro ◽  
Antonello Merlino ◽  
Giorgio Facchetti ◽  
...  

Three novel platinum(II) complexes bearing N-heterocyclic ligands, i.e., Pt2c, Pt-IV and Pt-VIII, were previously prepared and characterized. They manifested promising in vitro anticancer properties associated with non-conventional modes of action. To gain further mechanistic insight, we have explored here the reactions of these Pt compounds with a few model proteins, i.e., hen egg white lysozyme (HEWL), bovine pancreatic ribonuclease (RNase A), horse heart cytochrome c (Cyt-c) and human serum albumin (HSA), primarily through ESI MS analysis. Characteristic and variegate patterns of reactivity were highlighted in the various cases that appear to depend both on the nature of the Pt complex and of the interacting protein. The protein-bound Pt fragments were identified. In the case of the complex Pt2c, the adducts formed upon reaction with HEWL and RNase A were further characterized by solving the respective crystal structures: this allowed us to determine the exact location of the various Pt binding sites. The implications of the obtained results are discussed in relation to the possible mechanisms of action of these innovative anticancer Pt complexes.


1991 ◽  
Vol 56 (2) ◽  
pp. 478-490 ◽  
Author(s):  
Joaquin F. Perez-Benito ◽  
Conchita Arias

The reaction between horse-heart cytochrome c and ascorbic acid has been investigated in the pH range 5.5 – 7.1 and at 10.0 – 25.0 °C. The rate shows a first-order dependence on the concentration of cytochrome c, it increases in a non-linear way as the concentration of ascorbic acid increases, it increases markedly with increasing pH and, provided that the ionic strength of the medium is high enough, it fulfills the Arrhenius equation. The apparent activation energy increases as the pH of the solution increases. The results have been explained by means of a mechanism that includes the existence of an equilibrium between two forms (acidic and basic) of oxidized cytochrome c: cyt-H+ -Fe3+ + OH- cyt -Fe3+ + H2O, whose equilibrium constant is (6.7 ± 1.4). 108 at 25.0 °C, the acidic form being more reducible than the basic one. It is suggested that there is a linkage of hydrogenascorbate ion to both forms of cytochrome c previous to the redox reactions. Two possibilities for the oxidant-reductant linkage (binding and adsorption) are discussed in detail.


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