HiRIEF LC-MS enables deep proteome coverage and unbiased proteogenomics

2013 ◽  
Vol 11 (1) ◽  
pp. 59-62 ◽  
Author(s):  
Rui M M Branca ◽  
Lukas M Orre ◽  
Henrik J Johansson ◽  
Viktor Granholm ◽  
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Proteome Coverage

scholarly journals Evaluation and Refinement of Sample Preparation Methods for Extracellular Matrix Proteome Coverage

2021 ◽  
Vol 20 ◽  
pp. 100079
Author(s):  
Maxwell C. McCabe ◽  
Lauren R. Schmitt ◽  
Ryan C. Hill ◽  
Monika Dzieciatkowska ◽  
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Extracellular Matrix ◽  
Sample Preparation ◽  
Preparation Methods ◽  
Proteome Coverage ◽  
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scholarly journals Optimization of filtering criterion for SEQUEST database searching to improve proteome coverage in shotgun proteomics

2007 ◽  
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Author(s):  
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Xiaogang Jiang ◽  
Guanghui Han ◽  
Mingliang Ye ◽  
Hanfa Zou
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Shotgun Proteomics ◽  
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Proteome Coverage

scholarly journals Improved proteome coverage by using iTRAQ labelling and peptide OFFGEL fractionation

2008 ◽  
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pp. 27 ◽  
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Erick Gamelin ◽  
Catherine Guette
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Proteome Coverage

scholarly journals Homogenous Phase Enrichment of Cysteine-Containing Peptides for Improved Proteome Coverage

2015 ◽  
Vol 87 (13) ◽  
pp. 6861-6867 ◽  
Author(s):  
Jacek R. Wiśniewski ◽  
Gabriela Pruś
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Proteome Coverage

scholarly journals Subnanogram proteomics: Impact of LC column selection, MS instrumentation and data analysis strategy on proteome coverage for trace samples

2018 ◽  
Vol 427 ◽  
pp. 4-10 ◽  
Author(s):  
Ying Zhu ◽  
Rui Zhao ◽  
Paul D. Piehowski ◽  
Ronald J. Moore ◽  
Sujung Lim ◽  
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Keyword(s):  
Data Analysis ◽  
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Analysis Strategy

scholarly journals DIA-NN: neural networks and interference correction enable deep proteome coverage in high throughput

2019 ◽  
Vol 17 (1) ◽  
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Author(s):  
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Christoph B. Messner ◽  
Spyros I. Vernardis ◽  
Kathryn S. Lilley ◽  
Markus Ralser
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Neural Networks ◽  
High Throughput ◽  
Proteome Coverage ◽  
Interference Correction

scholarly journals DART‐ID Increases Single‐Cell Proteome Coverage

2019 ◽  
Vol 33 (S1) ◽  
Author(s):  
Albert Tian Chen ◽  
Alexander Franks ◽  
Nikolai Slavov
Keyword(s):  
Single Cell ◽  
Proteome Coverage ◽  
Cell Proteome

scholarly journals ExteNDing Proteome Coverage with Legumain as a Highly Specific Digestion Protease

2020 ◽  
Vol 92 (4) ◽  
pp. 2961-2971
Author(s):  
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Fatih Demir ◽  
Elfriede Dall ◽  
Andreas Perrar ◽  
Sven O. Dahms ◽  
...  
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Proteome Coverage

Increased quantitative proteome coverage with13C/12C-based, acid-cleavable isotope-coded affinity tag reagent and modified data acquisition scheme

PROTEOMICS ◽  
2005 ◽  
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pp. 380-387 ◽  
Author(s):  
Eugene C. Yi ◽  
Xiao-jun Li ◽  
Kelly Cooke ◽  
Hookeun Lee ◽  
Brian Raught ◽  
...  
Keyword(s):  
Data Acquisition ◽  
Affinity Tag ◽  
Proteome Coverage ◽  
Acquisition Scheme
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