scholarly journals The binary protein-protein interaction landscape of Escherichia coli

2014 ◽  
Vol 32 (3) ◽  
pp. 285-290 ◽  
Author(s):  
Seesandra V Rajagopala ◽  
Patricia Sikorski ◽  
Ashwani Kumar ◽  
Roberto Mosca ◽  
James Vlasblom ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Protein Interaction ◽  
Protein Protein Interaction

scholarly journals Protein-protein interaction network topology as a measure of bacterial plasmid-chromosome co-evolution

2019 ◽  
Author(s):  
Nghia T.H. Tran ◽  
Arun Decano ◽  
Tim Downing ◽  
Alexander D. Rahm
Keyword(s):  
Escherichia Coli ◽  
Protein Interaction ◽  
Network Topology ◽  
Protein Interaction Network ◽  
Interaction Network ◽  
Gene Interactions ◽  
Protein Protein Interaction ◽  
Chromosome Gene ◽  
Bacterial Plasmid ◽  
Protein Protein Interaction Network

AbstractIn this work, we investigate the evolvability of plasmids by examining the topology of plasmid-chromosome gene interactions in Escherichia coli ST131. We discover a convergence of the ratio of non-trivial loops per protein-protein interaction, which allows us to introduce a new invariant of bacterial PPINs: the indirect connectivity value.

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