X-ray Scattering from Immunostimulatory Tetrapod-Shaped DNA in Aqueous Solution To Explore Its Biological Activity–Conformation Relationship

2014 ◽  
Vol 118 (35) ◽  
pp. 10373-10379 ◽  
Author(s):  
Yusuke Sanada ◽  
Shunsuke Sakamoto ◽  
Tomoki Shiomi ◽  
Tadashi Okobira ◽  
Efstratios Mylonas ◽  
...  
1985 ◽  
Vol 40 (5-6) ◽  
pp. 364-372 ◽  
Author(s):  
P. Zipper ◽  
R. Wilfing ◽  
M. Kriechbaum ◽  
H. Durchschlag

Abstract The sulfhydryl enzyme malate synthase from baker’s yeast was X-irradiated with 6 kGy in air-saturated aqueous solution (enzyme concentration: ≃ 10 mg/ml; volume: 120 μl), in the absence or presence of the specific scavengers formate, superoxide dismutase, and catalase. After X-irradiation, a small aliquot of the irradiated solutions was tested for enzymic activity while the main portion was investigated by means of small-angle X-ray scattering. Additionally, an unir­radiated sample without additives was investigated as a reference. Experiments yielded the fol­lowing results: 1. X-irradiation in the absence of the mentioned scavengers caused considerable aggregation, fragmentation, and inactivation of the enzyme. The dose Dt37 for total (= repairable + non­-repayable) inactivation resulted as 4.4 kGy. The mean radius of gyration was found to be about 13 nm. The mean degree of aggregation was obtained as 5.7, without correction for fragmenta­tion. An estimation based on the thickness factor revealed that about 19% of material might be strongly fragmented. When this amount of fragments was accordingly taken into account, a value of 7.1 was obtained as an upper limit for the mean degree of aggregation. The observed retention of the thickness factor and the finding of two different cross-section factors are in full accord with the two-dimensional aggregation model established previously (Zipper and Durchschlag, Radiat. Environ. Biophys. 18, 99 - 121 (1980)). 2. The presence of catalytic amounts of superoxide dismutase and/or catalase, in the absence of formate, during X-irradiation reduced both aggregation and inactivation significantly. 3. The presence of formate (10 or 100 mᴍ) during X-irradiation led to a strong decrease of aggregation and inactivation. This effect was more pronounced with the higher formate concen­tration or when superoxide dismutase and/or catalase were simultaneously present during X-irradiation. The presence of formate also reduced the amount of fragments significantly. 4. The results clearly show that the aggregation and inactivation of malate synthase upon X-irradiation in aqueous solution are mainly caused by OH·; to a minor extent O·̄2 and H2O2 are additionally involved in the damaging processes.


2005 ◽  
Vol 109 (15) ◽  
pp. 7073-7083 ◽  
Author(s):  
Jörgen Jansson ◽  
Karin Schillén ◽  
Markus Nilsson ◽  
Olle Söderman ◽  
Gerhard Fritz ◽  
...  

1998 ◽  
Vol 37 (26) ◽  
pp. 6675-6683 ◽  
Author(s):  
Patric Lindqvist-Reis ◽  
Adela Muñoz-Páez ◽  
Sofia Díaz-Moreno ◽  
Sidhartha Pattanaik ◽  
Ingmar Persson ◽  
...  

1996 ◽  
Vol 248 (1) ◽  
pp. 121-127 ◽  
Author(s):  
T. Laitalainen ◽  
R. Serimaa ◽  
S. Vahvaselkä ◽  
Anne Reunanen

1992 ◽  
Vol 46 ◽  
pp. 1177-1182 ◽  
Author(s):  
Michael C. Read ◽  
Magnus Sandström ◽  
Antonio de la Hoz ◽  
Johan Springborg ◽  
Markku R. Sundberg ◽  
...  

1985 ◽  
Vol 7 (3) ◽  
pp. 161-166 ◽  
Author(s):  
Dario Braga ◽  
Elena Ferracini ◽  
Adele Ferrero ◽  
Alberto Ripamonti ◽  
David A. Brant ◽  
...  

2010 ◽  
Vol 12 (26) ◽  
pp. 6921 ◽  
Author(s):  
Morten Christensen ◽  
Kristoffer Haldrup ◽  
Kasper S. Kjær ◽  
Marco Cammarata ◽  
Michael Wulff ◽  
...  

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