Mechanism of NTP Hydrolysis by theEscherichia coliPrimary Replicative Helicase DnaB Protein. 2. Nucleotide and Nucleic Acid Specificities

Anasuya Roychowdhury; Michal R. Szymanski; Maria J. Jezewska; Wlodzimierz Bujalowski

doi:10.1021/bi9000529

Mechanism of NTP Hydrolysis by theEscherichia coliPrimary Replicative Helicase DnaB Protein. 2. Nucleotide and Nucleic Acid Specificities

Biochemistry ◽

10.1021/bi9000529 ◽

2009 ◽

Vol 48 (29) ◽

pp. 6730-6746 ◽

Cited By ~ 6

Author(s):

Anasuya Roychowdhury ◽

Michal R. Szymanski ◽

Maria J. Jezewska ◽

Wlodzimierz Bujalowski

Keyword(s):

Nucleic Acid ◽

Replicative Helicase ◽

Helicase Dnab

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Interactions of Escherichia coli Primary Replicative Helicase DnaB Protein with Single-Stranded DNA. The Nucleic Acid Does Not Wrap around the Protein Hexamer

Biochemistry ◽

10.1021/bi00027a001 ◽

1995 ◽

Vol 34 (27) ◽

pp. 8513-8519 ◽

Cited By ~ 78

Author(s):

Wlodzimierz Bujalowski ◽

Maria J. Jezewska

Keyword(s):

Escherichia Coli ◽

Nucleic Acid ◽

Single Stranded Dna ◽

Replicative Helicase ◽

Helicase Dnab

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Close proximity of tryptophan residues and ATP-binding site in Escherichia coli primary replicative helicase DnaB protein. Molecular topography of the enzyme.

Journal of Biological Chemistry ◽

10.1016/s0021-9258(18)31702-2 ◽

1994 ◽

Vol 269 (50) ◽

pp. 31359-31371 ◽

Cited By ~ 1

Author(s):

W Bujalowski ◽

M M Klonowska

Keyword(s):

Escherichia Coli ◽

Binding Site ◽

Atp Binding ◽

Replicative Helicase ◽

Atp Binding Site ◽

Close Proximity ◽

Tryptophan Residues ◽

Helicase Dnab

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Negative cooperativity in the binding of nucleotides to Escherichia coli replicative helicase DnaB protein. Interactions with fluorescent nucleotide analogs

Biochemistry ◽

10.1021/bi00073a023 ◽

1993 ◽

Vol 32 (22) ◽

pp. 5888-5900 ◽

Cited By ~ 64

Author(s):

Wlodzimierz Bujalowski ◽

Malgorzata Maria Klonowska

Keyword(s):

Escherichia Coli ◽

Protein Interactions ◽

Negative Cooperativity ◽

Nucleotide Analogs ◽

Replicative Helicase ◽

Helicase Dnab

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Global Conformational Transitions inEscherichia coliPrimary Replicative Helicase DnaB Protein Induced by ATP, ADP, and Single-stranded DNA Binding

Journal of Biological Chemistry ◽

10.1074/jbc.271.8.4261 ◽

1996 ◽

Vol 271 (8) ◽

pp. 4261-4265 ◽

Cited By ~ 38

Author(s):

Maria J. Jezewska ◽

Wlodzimierz Bujalowski

Keyword(s):

Dna Binding ◽

Conformational Transitions ◽

Single Stranded Dna ◽

Replicative Helicase ◽

Helicase Dnab

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Multiple-step kinetic mechanism of DNA-independent ATP binding and hydrolysis by Escherichia coli replicative helicase DnaB protein: quantitative analysis using the rapid quench-flow method 1 1Edited by D. Draper

Journal of Molecular Biology ◽

10.1006/jmbi.2000.4124 ◽

2000 ◽

Vol 303 (5) ◽

pp. 773-795 ◽

Cited By ~ 25

Author(s):

Surendran Rajendran ◽

Maria J. Jezewska ◽

Wlodzimierz Bujalowski

Keyword(s):

Escherichia Coli ◽

Quantitative Analysis ◽

Kinetic Mechanism ◽

Atp Binding ◽

Replicative Helicase ◽

Flow Method ◽

Rapid Quench ◽

Helicase Dnab ◽

Atp Binding And Hydrolysis ◽

Multiple Step

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Kinetic mechanism of the single-stranded DNA recognition by Escherichia coli replicative helicase DnaB protein. Application of the matrix projection operator technique to analyze stopped-flow kinetics

Journal of Molecular Biology ◽

10.1006/jmbi.1999.3378 ◽

2000 ◽

Vol 295 (4) ◽

pp. 831-852 ◽

Cited By ~ 21

Author(s):

Wlodzimierz Bujalowski ◽

Maria J. Jezewska

Keyword(s):

Escherichia Coli ◽

Projection Operator ◽

Dna Recognition ◽

Kinetic Mechanism ◽

Stopped Flow ◽

Operator Technique ◽

Replicative Helicase ◽

The Matrix ◽

Projection Operator Technique ◽

Helicase Dnab

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Oligomeric structure of Escherichia coli primary replicative helicase DnaB protein.

Journal of Biological Chemistry ◽

10.1016/s0021-9258(18)31701-0 ◽

1994 ◽

Vol 269 (50) ◽

pp. 31350-31358 ◽

Cited By ~ 5

Author(s):

W Bujalowski ◽

M M Klonowska ◽

M J Jezewska

Keyword(s):

Escherichia Coli ◽

Oligomeric Structure ◽

Replicative Helicase ◽

Helicase Dnab

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Strand Specificity in the Interactions ofEscherichia coliPrimary Replicative Helicase DnaB Protein with a Replication Fork†

Biochemistry ◽

10.1021/bi970712a ◽

1997 ◽

Vol 36 (33) ◽

pp. 10320-10326 ◽

Cited By ~ 32

Author(s):

Maria J. Jezewska ◽

Surendran Rajendran ◽

Wlodzimierz Bujalowski

Keyword(s):

Replication Fork ◽

Replicative Helicase ◽

Helicase Dnab

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Functional and Structural Heterogeneity of the DNA Binding Site of theEscherichia coliPrimary Replicative Helicase DnaB Protein

Journal of Biological Chemistry ◽

10.1074/jbc.273.15.9058 ◽

1998 ◽

Vol 273 (15) ◽

pp. 9058-9069 ◽

Cited By ~ 48

Author(s):

Maria J. Jezewska ◽

Surendran Rajendran ◽

Wlodzimierz Bujalowski

Keyword(s):

Dna Binding ◽

Binding Site ◽

Structural Heterogeneity ◽

Replicative Helicase ◽

Dna Binding Site ◽

Helicase Dnab

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‘Modulation of the enzymatic activities of replicative helicase (DnaB) by interaction with Hp0897: a possible mechanism for helicase loading inHelicobacter pylori’

Nucleic Acids Research ◽

10.1093/nar/gkw148 ◽

2016 ◽

Vol 44 (7) ◽

pp. 3288-3303 ◽

Cited By ~ 7

Author(s):

Vijay Verma ◽

Ajay Kumar ◽

Ram Gopal Nitharwal ◽

Jawed Alam ◽

Asish Kumar Mukhopadhyay ◽

...

Keyword(s):

Enzymatic Activities ◽

Replicative Helicase ◽

Helicase Loading ◽

Helicase Dnab

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