A Reality Check on Hardy–Weinberg

2013 ◽  
Vol 16 (4) ◽  
pp. 782-789 ◽  
Author(s):  
Alan E. Stark ◽  
Eugene Seneta

G. H. Hardy (1877–1947) and Wilhelm Weinberg (1862–1937) had very different lives, but in the minds of geneticists, the two are inextricably linked through the ownership of an apparently simple law called the Hardy–Weinberg law. We demonstrate that the simplicity is more apparent than real. Hardy derived the well-known trio of frequencies {q2, 2pq, p2} with a concise demonstration, whereas for Weinberg it was the prelude to an ingenious examination of the inheritance of twinning in man. Hardy's recourse to an identity relating to the distribution of types among offspring following random mating, rather than an identity relating to the mating matrix, may be the reason why he did not realize that Hardy–Weinberg equilibrium can be reached and sustained with non-random mating. The phrase ‘random mating’ always comes up in reference to the law. The elusive nature of this phrase is part of the reason for the misunderstandings that occur but also because, as we explain, mathematicians are able to use it in a different way from the man-in-the-street. We question the unthinking appeal to random mating as a model and explanation of the distribution of genotypes even when they are close to Hardy–Weinberg proportions. Such sustained proportions are possible under non-random mating.

1996 ◽  
Vol 74 (11) ◽  
pp. 1852-1859 ◽  
Author(s):  
Matthew A. Gitzendanner ◽  
Gayle E. Dupper ◽  
Eleanor E. White ◽  
Brett M. Foord ◽  
Paul D. Hodgskiss ◽  
...  

Lack of genetic markers has hindered the study of the mating system of Cronartium ribicola, an exotic forest pathogen Meeting natural and cultivated white pines throughout North America. Isozymes, randomly amplified polymorphic DNA (RAPDs), and restriction length polymorphisms (RFLPs) were used to study the mating system of this rust. Heterozygosity (outcrossing) in diploid telia was demonstrated by analysis of cultures derived from the meiotic products (basidiospores) of individual telia. Families of basidiospores cultured from single telia were used to test for Mendelian segregation and for conformance of loci to Hardy–Weinberg equilibrium. A total of 18 polymorphic loci were identified with the three marker systems. All except for three RAPD loci showed Mendelian segregation in the single-telium families. To quantify the level of outcrossing, gene and genotype frequencies were calculated for families from a single population. Up to 24 families were surveyed with isozymes, 14 with RAPDs, and 18 with RFLPs. Except for one isozyme locus (MPI) in one sample, all 14 loci tested with these families were in Hardy–Weinberg equilibrium, indicating random mating. Further studies, with a different sample from the same population, showed all three isozyme loci to be in Hardy–Weinberg equilibrium. The three marker systems were consistent as to the amount of variation detected. Resistance selection and breeding programs must consider the implications of genetic recombination that outcrossing affords the rust. Keywords: isozymes, RAPDs, RFLPs, Hardy–Weinberg equilibrium, white pine blister rust.


2019 ◽  
Author(s):  
Daniel Backenroth ◽  
Shai Carmi

AbstractGenome-wide scans for deviations from Hardy-Weinberg equilibrium (HWE) are commonly applied to detect genotyping errors. In contrast to the autosomes, genotype frequencies on the X chromosome do not reach HWE within a single generation. Instead, if allele frequencies in males and females initially differ, they oscillate for a few generations towards equilibrium. Several populations world-wide have experienced recent sex-biased admixture, namely, their male and female founders differed in ancestry and thus in allele frequencies. Sex-biased admixture makes testing for HWE difficult on X, because deviations are naturally expected, even under random mating post-admixture and error-free genotyping. In this paper, we develop a likelihood ratio test and a χ2 test that detect deviations from HWE on X while allowing for natural deviations due to sex-biased admixture. We demonstrate by simulations that our tests are powerful for detecting deviations due to non-random mating, while at the same time they do not reject the null under historical sex-biased admixture and random mating thereafter. We also demonstrate that when applied to 1000 Genomes project populations (e.g., as a quality control step), our tests reject fewer SNPs (among those showing frequency differences between the sexes) than other tests.


2021 ◽  
pp. 1-3
Author(s):  
Alan E. Stark

Abstract The Hardy–Weinberg law of population genetics is usually associated with the notion of random mating of parents. A numerical example for a triallelic autosomal locus shows that an uncountable set of mating combinations can maintain Hardy–Weinberg proportions. Therefore, one cannot infer random mating in a population from the observation of Hardy–Weinberg equilibrium. The mating system which ensures that the genotypic distribution of offspring is the same as that of the parents is specified.


2021 ◽  
Vol 43 ◽  
pp. e16
Author(s):  
Vinícius Freitas de Oliveira ◽  
Guilherme Augusto Pianezzer ◽  
Suzete Maria Silva Afonso

The genetics of human populations is the branch of Genetics that studies the dynamics of genes in natural populations, aiming at the elucidation of mechanisms that alter their genetic composition. Among the fundamentals of this science is the Hardy-Weinberg Equilibrium, which determines that gene frequencies remain unchanged and genotypic proportions reach a stable balance, obtaining the same constant relation with each other over time. To demonstrate this principle, it is necessary to admit that the studied population is not subject to evolutionary factors or to those that alter genotypic frequencies, increasing the homozygosity. More specifically, it is necessary to assume that the population obeys the following premises: random mating, infinite population, non-overlapping generations, in addition to the absence of mutation, selection and migration. More than recalling basic concepts of Genetics and Statistics, this article aims to describe the Bernstein Method for verifying the gene equilibrium for blood types. The research is concluded with a case study in the city of Engenheiro Coelho - SP, where the Hardy-Weinberg Equilibrium for blood types in the population is verified.


2008 ◽  
Vol 11 (3) ◽  
pp. 249-256 ◽  
Author(s):  
Oliver Mayo

AbstractHardy–Weinberg equilibrium (HWE) is the state of the genotypic frequency of two alleles of one autosomal gene locus after one discrete generation of random mating in an indefinitely large population: if the alleles areAandawith frequenciespandq(=1-p), then the equilibrium gene frequencies are simplypandqand the equilibrium genotypic frequencies forAA,Aaandaaarep2, 2pqandq2. It was independently identified in 1908 by G. H. Hardy and W. Weinberg after earlier attempts by W. E. Castle and K. Pearson. Weinberg, well known for pioneering studies of twins, made many important contributions to genetics, especially human genetics. Existence of this equilibrium provides a reference point against which the effects of selection, linkage, mutation, inbreeding and chance can be detected and estimated. Its discovery marked the initiation of population genetics.


1987 ◽  
Vol 49 (1) ◽  
pp. 69-70 ◽  
Author(s):  
Alan R. Templeton

SummaryThe average effect and average excess both measure the phenotypic effects of gametes in a population. A matrix notation is introduced that provides a general analytical solution for the average effects at a single locus with k alleles that can be solved for any population regardless of its genotype frequencies. This same notation also provides an easy way of deriving and generalizing to k alleles the well-known relationships between average effects and average excesses that exist under random-mating and regular deviations from Hardy–Weinberg equilibrium due to inbreeding.


Genetics ◽  
1974 ◽  
Vol 78 (4) ◽  
pp. 1245-1249
Author(s):  
I M R van Aarde

ABSTRACT An expression is derived which accounts for the effect of linkage on the mean value of diploid inbreds. The original population is taken to be in Hardy-Weinberg equilibrium. It is shown that linkage will accelerate inbreeding depression. The precise nature of the acceleration is worked out for some special cases.


Sign in / Sign up

Export Citation Format

Share Document