Cellobiose fermentation by Saccharomyces cerevisiae: Comparative analysis of intra versus extracellular sugar hydrolysis

2018 ◽  
Vol 75 ◽  
pp. 59-67 ◽  
Author(s):  
Mary Casa-Villegas ◽  
Julio Polaina ◽  
Julia Marín-Navarro
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Comparative Analysis ◽  
Sugar Hydrolysis

scholarly journals Comparative analysis of codon usage patterns in chloroplast genomes of six Euphorbiaceae species

PeerJ ◽  
2020 ◽  
Vol 8 ◽  
pp. e8251 ◽  
Author(s):  
Zhanjun Wang ◽  
Beibei Xu ◽  
Bao Li ◽  
Qingqing Zhou ◽  
Guiyi Wang ◽  
...  
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Comparative Analysis ◽  
Codon Usage ◽  
Plant Species ◽  
Populus Trichocarpa ◽  
Model Organisms ◽  
Mutation Pressure ◽  
Chloroplast Genomes ◽  
Usage Patterns ◽  
Exogenous Expression

Euphorbiaceae plants are important as suppliers of biodiesel. In the current study, the codon usage patterns and sources of variance in chloroplast genome sequences of six different Euphorbiaceae plant species have been systematically analyzed. Our results revealed that the chloroplast genomes of six Euphorbiaceae plant species were biased towards A/T bases and A/T-ending codons, followed by detection of 17 identical high-frequency codons including GCT, TGT, GAT, GAA, TTT, GGA, CAT, AAA, TTA, AAT, CCT, CAA, AGA, TCT, ACT, TAT and TAA. It was found that mutation pressure was a minor factor affecting the variation of codon usage, however, natural selection played a significant role. Comparative analysis of codon usage frequencies of six Euphorbiaceae plant species with four model organisms reflected that Arabidopsis thaliana, Populus trichocarpa, and Saccharomyces cerevisiae should be considered as suitable exogenous expression receptor systems for chloroplast genes of six Euphorbiaceae plant species. Furthermore, it is optimal to choose Saccharomyces cerevisiae as the exogenous expression receptor. The outcome of the present study might provide important reference information for further understanding the codon usage patterns of chloroplast genomes in other plant species.

scholarly journals Genome sequencing and comparative analysis of Saccharomyces cerevisiae strain YJM789

2007 ◽  
Vol 104 (31) ◽  
pp. 12825-12830 ◽  
Author(s):  
W. Wei ◽  
J. H. McCusker ◽  
R. W. Hyman ◽  
T. Jones ◽  
Y. Ning ◽  
...  
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Comparative Analysis ◽  
Genome Sequencing

scholarly journals Genome Sequencing and Comparative Analysis of Saccharomyces cerevisiae Strains of the Peterhof Genetic Collection

PLoS ONE ◽  
2016 ◽  
Vol 11 (5) ◽  
pp. e0154722 ◽  
Author(s):  
Polina B. Drozdova ◽  
Oleg V. Tarasov ◽  
Andrew G. Matveenko ◽  
Elina A. Radchenko ◽  
Julia V. Sopova ◽  
...  
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Comparative Analysis ◽  
Genome Sequencing

Large-scale sequencing and comparative analysis of oenological Saccharomyces cerevisiae strains supported by nanopore refinement of key genomes

2021 ◽  
Vol 97 ◽  
pp. 103753
Author(s):  
Arianna Basile ◽  
Fabio De Pascale ◽  
Federico Bianca ◽  
Alessandro Rossi ◽  
Martina Frizzarin ◽  
...  
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Comparative Analysis ◽  
Large Scale
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