CombiMotif: A new algorithm for network motifs discovery in protein–protein interaction networks

Physica A Statistical Mechanics and its Applications ◽

10.1016/j.physa.2014.08.062 ◽

2014 ◽

Vol 416 ◽

pp. 309-320

Author(s):

Jiawei Luo ◽

Guanghui Li ◽

Dan Song ◽

Cheng Liang

Keyword(s):

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Network Motifs ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Network motifs that recur across species, including gene regulatory and protein–protein interaction networks

Archives of Toxicology ◽

10.1007/s00204-014-1274-y ◽

2014 ◽

Vol 89 (4) ◽

pp. 489-499 ◽

Cited By ~ 4

Author(s):

Robert Borotkanics ◽

Harold Lehmann

Keyword(s):

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Network Motifs ◽

Protein Protein Interaction ◽

Gene Regulatory ◽

Protein Protein Interaction Networks

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Network simulation reveals significant contribution of network motifs to the age-dependency of yeast protein–protein interaction networks

Molecular BioSystems ◽

10.1039/c4mb00230j ◽

2014 ◽

Vol 10 (9) ◽

pp. 2277 ◽

Cited By ~ 6

Author(s):

Cheng Liang ◽

Jiawei Luo ◽

Dan Song

Keyword(s):

Protein Interaction ◽

Significant Contribution ◽

Network Simulation ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Network Motifs ◽

Age Dependency ◽

Yeast Protein ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Faculty Opinions recommendation of Modular decomposition of protein-protein interaction networks.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1020428.232579 ◽

2004 ◽

Author(s):

Ruedi Aebersold

Keyword(s):

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Modular Decomposition ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Faculty Opinions recommendation of Integrating protein-protein interaction networks with phenotypes reveals signs of interactions.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.718178553.793487291 ◽

2013 ◽

Author(s):

Marc Therrien ◽

Dariel Ashton-Beaucage

Keyword(s):

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Inferring Protein-Protein Interaction Networks From Mass Spectrometry-Based Proteomic Approaches: A Mini-Review

Computational and Structural Biotechnology Journal ◽

10.1016/j.csbj.2019.05.007 ◽

2019 ◽

Vol 17 ◽

pp. 805-811 ◽

Cited By ~ 7

Author(s):

Kumar Yugandhar ◽

Shagun Gupta ◽

Haiyuan Yu

Keyword(s):

Mass Spectrometry ◽

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Better Link Prediction for Protein-Protein Interaction Networks

2020 IEEE 20th International Conference on Bioinformatics and Bioengineering (BIBE) ◽

10.1109/bibe50027.2020.00017 ◽

2020 ◽

Author(s):

Ho Yin Yuen ◽

Jesper Jansson

Keyword(s):

Protein Interaction ◽

Link Prediction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Is the intrinsic disorder of proteins the cause of the scale-free architecture of protein–protein interaction networks?

PROTEOMICS ◽

10.1002/pmic.200600455 ◽

2007 ◽

Vol 7 (6) ◽

pp. 961-964 ◽

Cited By ~ 15

Author(s):

Santiago Schnell ◽

Santo Fortunato ◽

Sourav Roy

Keyword(s):

Protein Interaction ◽

Intrinsic Disorder ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Scale Free ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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On Identifying and Analyzing Significant Nodes in Protein-Protein Interaction Networks

2013 IEEE 13th International Conference on Data Mining Workshops ◽

10.1109/icdmw.2013.126 ◽

2013 ◽

Cited By ~ 1

Author(s):

Rohan Khazanchi ◽

Kathryn Dempsey ◽

Ishwor Thapa ◽

Hesham Ali

Keyword(s):

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Establishing a protein-protein interaction networks for hypertrophic cardiomyopathy

Journal of Electrocardiology ◽

10.1016/j.jelectrocard.2010.12.114 ◽

2011 ◽

Vol 44 (2) ◽

pp. e47-e48

Author(s):

Chia-Chun Lu ◽

Ching-Shiun Chang ◽

Ming-Ju Tsai ◽

Yu-Shan Chen ◽

Yueh Chen ◽

...

Keyword(s):

Hypertrophic Cardiomyopathy ◽

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Effect of Alternative Splicing on the Degree Centrality of Nodes in Protein–Protein Interaction Networks of Homo sapiens

Journal of Proteome Research ◽

10.1021/pr4000812 ◽

2013 ◽

Vol 12 (4) ◽

pp. 1980-1988 ◽

Cited By ~ 7

Author(s):

Anupam Sinha ◽

Hampapathalu Adimurthy Nagarajaram

Keyword(s):

Alternative Splicing ◽

Protein Interaction ◽

Homo Sapiens ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Degree Centrality ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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