GeoFEM: High performance parallel FEM for solid earth

1999 ◽  
pp. 133-140 ◽  
Author(s):  
Kazuteru Garatani ◽  
Hisashi Nakamura ◽  
Hiroshi Okuda ◽  
Genki Yagawa
Keyword(s):  
Solid Earth ◽  
High Performance ◽  
Parallel Fem

GeoFEM: high performance parallel FEM for solid earth

2001 ◽  
Vol 18 (1) ◽  
pp. 107-114 ◽  
Author(s):  
K Garatani ◽  
H Nakamura ◽  
H Okuda ◽  
G Yagawa
Keyword(s):  
Solid Earth ◽  
High Performance ◽  
Parallel Fem

GeoFEM: High-performance parallel FEM for geophysical applications

1999 ◽  
pp. 292-303 ◽  
Author(s):  
Mikio Iizuka ◽  
Hisashi Nakamura ◽  
Kazuteru Garatani ◽  
Kengo Nkajima ◽  
Hiroshi Okuda ◽  
...  
Keyword(s):  
High Performance ◽  
Parallel Fem

scholarly journals Computational Fluid Dynamics in Solid Earth Sciences–a HPC challenge

2012 ◽  
Vol 22 (7) ◽  
pp. 32-36
Author(s):  
Vlad Constantin Manea ◽  
Marina Manea ◽  
Mihai Pomeran ◽  
Lucian Besutiu ◽  
Luminita Zlagnean
Keyword(s):  
Earth Sciences ◽  
Fluid Dynamics ◽  
Computational Fluid Dynamics ◽  
Solid Earth ◽  
High Speed ◽  
High Performance ◽  
Gigabit Ethernet ◽  
High Speed Interconnects ◽  
Computational Fluid Dynamics Cfd ◽  
Research Facilities

Presently, the Solid Earth Sciences started to move towards implementing High Performance Computational (HPC) research facilities. One of the key tenants of HPC is performance, which strongly depends on the interaction between software and hardware. In this paper, they are presented benchmark results from two HPC systems. Testing a Computational Fluid Dynamics (CFD) code specific for Solid Earth Sciences, the HPC system Horus, based on Gigabit Ethernet, performed reasonably well compared with its counterpart CyberDyn, based on Infiniband QDR fabric. However, the HPCC CyberDyn based on low-latency high-speed QDR network dedicated to MPI traffic outperformed the HPCC Horus. Due to the high-resolution simulations involved in geodynamic research studies, HPC facilities used in Earth Sciences should benefit from larger up-front investment in future systems that are based on high-speed interconnects.

scholarly journals On Contraction of Three-Dimensional Multiple Shear Mechanism Model for Evaluation of Large Scale Liquefaction Using High Performance Computing

Geosciences ◽  
2019 ◽  
Vol 9 (1) ◽  
pp. 38
Author(s):  
Wataru Hotta ◽  
Shunichi Suzuki ◽  
Muneo Hori
Keyword(s):  
High Performance ◽  
Large Scale ◽  
Three Dimensional ◽  
Computation Time ◽  
Parallel Computer ◽  
Analysis Model ◽  
Mechanism Model ◽  
Shear Mechanism ◽  
Material State ◽  
Parallel Fem

For more reliable evaluation of liquefaction, an analysis model of higher fidelity should be used even though it requires more numerical computation. We developed a parallel finite element method (FEM), implemented with the non-linear multiple shear mechanism model. A bottleneck experienced when implementing the model is the use of vast amounts of CPU memory for material state parameters. We succeeded in drastically reducing the computation requirements of the model by suitably approximating the formulation of the model. An analysis model of high fidelity was constructed for a soil-structure system, and the model was analyzed by using the developed parallel FEM on a parallel computer. The amount of required CPU memory was reduced. The computation time was reduced as well, and the practical applicability of the developed parallel FEM is demonstrated.

A High Performance Energy Analyzer for Use in Electron Scanning Microscopy

1969 ◽  
Vol 27 ◽  
pp. 14-15
Author(s):  
A. V. Crewe ◽  
M. Isaacson ◽  
D. Johnson
Keyword(s):  
High Performance ◽  
Vertical Plane ◽  
Median Plane ◽  
Electron Gun ◽  
Uniform Field ◽  
Loss Mechanism ◽  
Electron Scanning Microscopy ◽  
Sector Type ◽  
Double Focusing ◽  
Electron Energy Loss

A double focusing magnetic spectrometer has been constructed for use with a field emission electron gun scanning microscope in order to study the electron energy loss mechanism in thin specimens. It is of the uniform field sector type with curved pole pieces. The shape of the pole pieces is determined by requiring that all particles be focused to a point at the image slit (point 1). The resultant shape gives perfect focusing in the median plane (Fig. 1) and first order focusing in the vertical plane (Fig. 2).

Vacuum System to Minimize the Specimen Contamination of High-Performance EM

1977 ◽  
Vol 35 ◽  
pp. 68-69
Author(s):  
N. Yoshimura ◽  
K. Shirota ◽  
T. Etoh
Keyword(s):  
Electron Microscope ◽  
High Speed ◽  
High Performance ◽  
High Vacuum ◽  
Vacuum System ◽  
Pump System ◽  
Pumping System ◽  
Diffusion Pump ◽  
Almost All ◽  
Cascade Type

One of the most important requirements for a high-performance EM, especially an analytical EM using a fine beam probe, is to prevent specimen contamination by providing a clean high vacuum in the vicinity of the specimen. However, in almost all commercial EMs, the pressure in the vicinity of the specimen under observation is usually more than ten times higher than the pressure measured at the punping line. The EM column inevitably requires the use of greased Viton O-rings for fine movement, and specimens and films need to be exchanged frequently and several attachments may also be exchanged. For these reasons, a high speed pumping system, as well as a clean vacuum system, is now required. A newly developed electron microscope, the JEM-100CX features clean high vacuum in the vicinity of the specimen, realized by the use of a CASCADE type diffusion pump system which has been essentially improved over its predeces- sorD employed on the JEM-100C.

Use of the Magnetostatic Analogue In Electromagnetic Lens Engineering

1970 ◽  
Vol 28 ◽  
pp. 360-361
Author(s):  
John W. Coleman
Keyword(s):  
Boundary Conditions ◽  
High Performance ◽  
Force Fields ◽  
Optical Design ◽  
Direct Conversion ◽  
Design Engineering ◽  
Design Data ◽  
Scalar Potentials ◽  
Geometric Elements ◽  
At Will

In the design engineering of high performance electromagnetic lenses, the direct conversion of electron optical design data into drawings for reliable hardware is oftentimes difficult, especially in terms of how to mount parts to each other, how to tolerance dimensions, and how to specify finishes. An answer to this is in the use of magnetostatic analytics, corresponding to boundary conditions for the optical design. With such models, the magnetostatic force on a test pole along the axis may be examined, and in this way one may obtain priority listings for holding dimensions, relieving stresses, etc..The development of magnetostatic models most easily proceeds from the derivation of scalar potentials of separate geometric elements. These potentials can then be conbined at will because of the superposition characteristic of conservative force fields.

Prospects for convergent beam electron diffraction with a 200kV cold field-emission transmission electron microscope

1991 ◽  
Vol 49 ◽  
pp. 466-467
Author(s):  
J W Steeds ◽  
R Vincent
Keyword(s):  
Field Emission ◽  
High Performance ◽  
Small Diameter ◽  
Convergent Beam Electron Diffraction ◽  
Zone Axis ◽  
Medium Voltage ◽  
Transmission Electron ◽  
Good Crystallinity ◽  
Special Modification ◽  
Convergent Beam

We review the analytical powers which will become more widely available as medium voltage (200-300kV) TEMs with facilities for CBED on a nanometre scale come onto the market. Of course, high performance cold field emission STEMs have now been in operation for about twenty years, but it is only in relatively few laboratories that special modification has permitted the performance of CBED experiments. Most notable amongst these pioneering projects is the work in Arizona by Cowley and Spence and, more recently, that in Cambridge by Rodenburg and McMullan.There are a large number of potential advantages of a high intensity, small diameter, focussed probe. We discuss first the advantages for probes larger than the projected unit cell of the crystal under investigation. In this situation we are able to perform CBED on local regions of good crystallinity. Zone axis patterns often contain information which is very sensitive to thickness changes as small as 5nm. In conventional CBED, with a lOnm source, it is very likely that the information will be degraded by thickness averaging within the illuminated area.

Current State of Biological High-Resolution Scanning Electron Microscopy

1988 ◽  
Vol 46 ◽  
pp. 180-181 ◽  
Author(s):  
Klaus-Ruediger Peters
Keyword(s):  
High Performance ◽  
Low Voltage ◽  
Backscattered Electrons ◽  
Lens Position ◽  
Low Voltage Operation ◽  
Signal Collection ◽  
Probe Size ◽  
Electron Microscopes ◽  
Scanning Electron Microscopes ◽  
Scanning Electron

A new generation of high performance field emission scanning electron microscopes (FSEM) is now commercially available (JEOL 890, Hitachi S 900, ISI OS 130-F) characterized by an "in lens" position of the specimen where probe diameters are reduced and signal collection improved. Additionally, low voltage operation is extended to 1 kV. Compared to the first generation of FSEM (JE0L JSM 30, Hitachi S 800), which utilized a specimen position below the final lens, specimen size had to be reduced but useful magnification could be impressively increased in both low (1-4 kV) and high (5-40 kV) voltage operation, i.e. from 50,000 to 200,000 and 250,000 to 1,000,000 x respectively.At high accelerating voltage and magnification, contrasts on biological specimens are well characterized1 and are produced by the entering probe electrons in the outmost surface layer within -vl nm depth. Backscattered electrons produce only a background signal. Under these conditions (FIG. 1) image quality is similar to conventional TEM (FIG. 2) and only limited at magnifications >1,000,000 x by probe size (0.5 nm) or non-localization effects (%0.5 nm).

A high-performance oil-free backing pump for electron microscopes

1978 ◽  
Vol 36 (1) ◽  
pp. 110-111
Author(s):  
G.K.W. Balkau ◽  
E. Bez ◽  
J.L. Farrant
Keyword(s):  
Molecular Weight ◽  
Electron Microscope ◽  
Hot Spots ◽  
High Performance ◽  
Carbonaceous Material ◽  
Contamination Rate ◽  
Low Molecular Weight ◽  
Principal Source ◽  
Rotary Pumps ◽  
Electron Microscopes

The earliest account of the contamination of electron microscope specimens by the deposition of carbonaceous material during electron irradiation was published in 1947 by Watson who was then working in Canada. It was soon established that this carbonaceous material is formed from organic vapours, and it is now recognized that the principal source is the oil-sealed rotary pumps which provide the backing vacuum. It has been shown that the organic vapours consist of low molecular weight fragments of oil molecules which have been degraded at hot spots produced by friction between the vanes and the surfaces on which they slide. As satisfactory oil-free pumps are unavailable, it is standard electron microscope practice to reduce the partial pressure of organic vapours in the microscope in the vicinity of the specimen by using liquid-nitrogen cooled anti-contamination devices. Traps of this type are sufficient to reduce the contamination rate to about 0.1 Å per min, which is tolerable for many investigations.

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