Analysis of Gene Expression Data: Application of Quantum-Inspired Evolutionary Algorithm to Minimum Sum-of-Squares Clustering

2005 ◽  
pp. 383-391 ◽  
Author(s):  
Wengang Zhou ◽  
Chunguang Zhou ◽  
Yanxin Huang ◽  
Yan Wang
Keyword(s):  
Gene Expression ◽  
Evolutionary Algorithm ◽  
Gene Expression Data ◽  
Sum Of Squares ◽  
Expression Data ◽  
Data Application

An Immune-Evolutionary Algorithm for Multiple Rearrangements of Gene Expression Data

2004 ◽  
Vol 5 (2) ◽  
pp. 157-179 ◽  
Author(s):  
Janaína S. de Sousa ◽  
Lalinka de C. T. Gomes ◽  
George B. Bezerra ◽  
Leandro N. de Castro ◽  
Fernando J. Von Zuben
Keyword(s):  
Gene Expression ◽  
Evolutionary Algorithm ◽  
Gene Expression Data ◽  
Expression Data ◽  
Immune Evolutionary Algorithm

scholarly journals Identification of drug-specific pathways based on gene expression data: application to drug induced lung injury

2015 ◽  
Vol 7 (8) ◽  
pp. 904-920 ◽  
Author(s):  
Ioannis N. Melas ◽  
Theodore Sakellaropoulos ◽  
Francesco Iorio ◽  
Leonidas G. Alexopoulos ◽  
Wei-Yin Loh ◽  
...  
Keyword(s):  
Gene Expression ◽  
Linear Programming ◽  
Lung Injury ◽  
Prior Knowledge ◽  
Gene Expression Data ◽  
Integer Linear Programming ◽  
Expression Data ◽  
Drug Induced ◽  
Data Application ◽  
Toxic Drugs

An Integer Linear Programming (ILP) formulation is introduced to model the modes of action of lung toxic drugs based on gene expression data and prior knowledge of protein connectivity.

AN IMPROVED QUANTUM-INSPIRED EVOLUTIONARY ALGORITHM FOR CLUSTERING GENE EXPRESSION DATA

2007 ◽  
pp. 1351-1356 ◽  
Author(s):  
W.G. Zhou ◽  
C.G. Zhou ◽  
G.X. Liu ◽  
H.Y. Lv ◽  
Y.C. Liang
Keyword(s):  
Gene Expression ◽  
Evolutionary Algorithm ◽  
Gene Expression Data ◽  
Expression Data
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