An evolutionary algorithm for discovering biclusters in gene expression data of breast cancer

2008 ◽  
Author(s):  
Qinghua Huang ◽  
Minhua Lu ◽  
Hong Yan
Keyword(s):  
Breast Cancer ◽  
Gene Expression ◽  
Evolutionary Algorithm ◽  
Gene Expression Data ◽  
Expression Data

scholarly journals Immune microenvironment and intrinsic subtyping in hormone receptor-positive/HER2-negative breast cancer

2021 ◽  
Vol 7 (1) ◽  
Author(s):  
Gaia Griguolo ◽  
Maria Vittoria Dieci ◽  
Laia Paré ◽  
Federica Miglietta ◽  
Daniele Giulio Generali ◽  
...  
Keyword(s):  
Breast Cancer ◽  
Gene Expression ◽  
Gene Expression Data ◽  
Hormone Receptor ◽  
Tumor Biology ◽  
Expression Data ◽  
Immune Microenvironment ◽  
Immune Infiltrate ◽  
Hormone Receptor Positive ◽  
Her2 Breast Cancer

AbstractLittle is known regarding the interaction between immune microenvironment and tumor biology in hormone receptor (HR)+/HER2− breast cancer (BC). We here assess pretreatment gene-expression data from 66 HR+/HER2− early BCs from the LETLOB trial and show that non-luminal tumors (HER2-enriched, Basal-like) present higher tumor-infiltrating lymphocyte levels than luminal tumors. Moreover, significant differences in immune infiltrate composition, assessed by CIBERSORT, were observed: non-luminal tumors showed a more proinflammatory antitumor immune infiltrate composition than luminal ones.

scholarly journals Logic-based analysis of gene expression data predicts association between TNF, TGFB1 and EGF pathways in basal-like breast cancer

Methods ◽  
2020 ◽  
Vol 179 ◽  
pp. 89-100 ◽  
Author(s):  
Kyuri Jo ◽  
Beatriz Santos-Buitrago ◽  
Minsu Kim ◽  
Sungmin Rhee ◽  
Carolyn Talcott ◽  
...  
Keyword(s):  
Breast Cancer ◽  
Gene Expression ◽  
Gene Expression Data ◽  
Expression Data ◽  
Basal Like Breast Cancer

scholarly journals Coexpression and coregulation analysis of time-series gene expression data in estrogen-induced breast cancer cell

2013 ◽  
Vol 8 (1) ◽  
Author(s):  
Anirban Bhar ◽  
Martin Haubrock ◽  
Anirban Mukhopadhyay ◽  
Ujjwal Maulik ◽  
Sanghamitra Bandyopadhyay ◽  
...  
Keyword(s):  
Breast Cancer ◽  
Gene Expression ◽  
Time Series ◽  
Cancer Cell ◽  
Breast Cancer Cell ◽  
Gene Expression Data ◽  
Expression Data ◽  
Time Series Gene Expression ◽  
Analysis Of Time Series
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