EigenMS: De Novo Analysis of Peptide Tandem Mass Spectra by Spectral Graph Partitioning

2005 ◽  
pp. 357-372 ◽  
Author(s):  
Marshall Bern ◽  
David Goldberg
Keyword(s):  
Graph Partitioning ◽  
Mass Spectra ◽  
De Novo ◽  
Tandem Mass ◽  
Tandem Mass Spectra ◽  
Spectral Graph ◽  
Spectral Graph Partitioning

scholarly journals De Novo Sequencing of Peptides from High-Resolution Bottom-Up Tandem Mass Spectra using Top-Down Intended Methods

PROTEOMICS ◽  
2017 ◽  
Vol 17 (23-24) ◽  
pp. 1600321 ◽  
Author(s):  
Kira Vyatkina ◽  
Lennard J. M. Dekker ◽  
Si Wu ◽  
Martijn M. VanDuijn ◽  
Xiaowen Liu ◽  
...  
Keyword(s):  
High Resolution ◽  
Mass Spectra ◽  
De Novo ◽  
De Novo Sequencing ◽  
Tandem Mass ◽  
Top Down ◽  
Bottom Up ◽  
Tandem Mass Spectra

De Novo Sequencing of Peptides from Top-Down Tandem Mass Spectra

2015 ◽  
Vol 14 (11) ◽  
pp. 4450-4462 ◽  
Author(s):  
Kira Vyatkina ◽  
Si Wu ◽  
Lennard J. M. Dekker ◽  
Martijn M. VanDuijn ◽  
Xiaowen Liu ◽  
...  
Keyword(s):  
Mass Spectra ◽  
De Novo ◽  
De Novo Sequencing ◽  
Tandem Mass ◽  
Top Down ◽  
Tandem Mass Spectra

pNovo+: De Novo Peptide Sequencing Using Complementary HCD and ETD Tandem Mass Spectra

2012 ◽  
Vol 12 (2) ◽  
pp. 615-625 ◽  
Author(s):  
Hao Chi ◽  
Haifeng Chen ◽  
Kun He ◽  
Long Wu ◽  
Bing Yang ◽  
...  
Keyword(s):  
Mass Spectra ◽  
De Novo ◽  
Peptide Sequencing ◽  
Tandem Mass ◽  
Tandem Mass Spectra ◽  
De Novo Peptide Sequencing ◽  
De Novo Peptide
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