scholarly journals Complete Genome Sequences and Phylogenetic Analysis of West Nile Virus Strains Isolated from the United States, Europe, and the Middle East

Virology ◽  
2002 ◽  
Vol 298 (1) ◽  
pp. 96-105 ◽  
Author(s):  
Robert S. Lanciotti ◽  
Gregory D. Ebel ◽  
Vincent Deubel ◽  
Amy J. Kerst ◽  
Severine Murri ◽  
...  
Keyword(s):  
United States ◽  
Phylogenetic Analysis ◽  
West Nile Virus ◽  
Middle East ◽  
Complete Genome ◽  
The United States ◽  
Genome Sequences ◽  
West Nile ◽  
Virus Strains

scholarly journals Nearly Complete Genome Sequences of 17 Enterovirus D68 Strains from Kansas City, Missouri, 2018

2019 ◽  
Vol 8 (45) ◽  
Author(s):  
Suman B. Pakala ◽  
Yi Tan ◽  
Ferdaus Hassan ◽  
Annie Mai ◽  
Robert H. Markowitz ◽  
...  
Keyword(s):  
United States ◽  
Phylogenetic Analysis ◽  
Complete Genome ◽  
Kansas City ◽  
The United States ◽  
Genome Sequences ◽  
Enterovirus D68

Here, we report 17 nearly complete genome sequences of enterovirus D68 (EV-D68) isolated from Kansas City, MO, in 2018. Phylogenetic analysis suggests that these strains belong to subclade B3, similar to the ones that caused the 2016 epidemics in the United States but different from the 2014 outbreak B1 strains.

scholarly journals 338. Analysis of Etiologies of Aseptic Meningitis within a Nation-Wide Hospital Network

2020 ◽  
Vol 7 (Supplement_1) ◽  
pp. S239-S239
Author(s):  
Arunmozhi S Aravagiri ◽  
Scott Kubomoto ◽  
Ayutyanont Napatkamon ◽  
Sarah Wilson ◽  
Sudhakar Mallela
Keyword(s):  
United States ◽  
West Nile Virus ◽  
Aseptic Meningitis ◽  
Epidemiologic Study ◽  
The United States ◽  
Positive Test ◽  
Diagnostic Tools ◽  
West Nile ◽  
Varicella Zoster ◽  
The Us

Abstract Background Aseptic meningitis can be caused by an array of microorganisms, both bacterial and non-bacterial, as well as non-infectious conditions. Some etiologies of aseptic meningitis require treatment with antibiotics, antiviral, antifungals, anti-parasitic agents, immunosuppressants, and or chemotherapy. There are limited diagnostic tools for diagnosing certain types of aseptic meningitis, therefore knowing the differential causes of aseptic meningitis, and their relative percentages may assist in diagnosis. Review of the literature reveals that there are no recent studies of etiologies of aseptic meningitis in the United States (US). This is an epidemiologic study to delineate etiologies of aseptic meningitis in a large database of 185 HCA hospitals across the US. Methods Data was collected from January 2016 to December 2019 on all patients diagnosed with meningitis. CSF PCR studies, and CSF antibody tests were then selected for inclusion. Results Total number of encounters were 3,149 hospitalizations. Total number of individual labs analyzed was 10,613, and of these 262 etiologies were identified. 23.6% (62) of cases were due to enterovirus, 18.7% (49) due to HSV-2, 14.5% (38) due to West Nile virus, 13.7% (36) due to Varicella zoster (VZV), 10.5% (27) due to Cryptococcus. Additionally, we analyzed the rate of positive test results by region. Nationally, 9.7% of tests ordered for enterovirus were positive. In contrast, 0.5% of tests ordered for HSV 1 were positive. The southeastern United States had the highest rate of positive tests for HSV 2 (7% of tests ordered for HSV 2 were positive). The central United States had the highest rate of positive test for West Nile virus (11% of tests ordered for West Nile were positive). The northeastern region and the highest rate of positive tests for varicella zoster (18%). Table 1: Percentage of positive CSF tests (positive tests/tests ordered) Table 2: Lists the number of HIV patients and transplant patients that had positive CSF PCR/serologies Figure 1: Percentage of positive CSF tests in each region Conclusion Approximately 40% of aseptic meningitis population had treatable etiologies. A third of the Cryptococcus meningitis population had HIV. Furthermore, enteroviruses had the majority of cases within the US, which are similar to studies done in other parts of the world. Disclosures All Authors: No reported disclosures

scholarly journals Meteorological Conditions Associated with Increased Incidence of West Nile Virus Disease in the United States, 2004–2012

2015 ◽  
Vol 92 (5) ◽  
pp. 1013-1022 ◽  
Author(s):  
Micah B. Hahn ◽  
Roger S. Nasci ◽  
Mark J. Delorey ◽  
Rebecca J. Eisen ◽  
Andrew J. Monaghan ◽  
...  
Keyword(s):  
United States ◽  
West Nile Virus ◽  
Virus Disease ◽  
The United States ◽  
Meteorological Conditions ◽  
West Nile

Improving the prediction of arbovirus outbreaks: A comparison of climate-driven models for West Nile virus in an endemic region of the United States

Acta Tropica ◽  
2018 ◽  
Vol 185 ◽  
pp. 242-250 ◽  
Author(s):  
Justin K. Davis ◽  
Geoffrey P. Vincent ◽  
Michael B. Hildreth ◽  
Lon Kightlinger ◽  
Christopher Carlson ◽  
...  
Keyword(s):  
United States ◽  
West Nile Virus ◽  
The United States ◽  
Endemic Region ◽  
West Nile

scholarly journals Regional Variation of Climatic Influences on West Nile Virus Outbreaks in the United States

2014 ◽  
Vol 91 (4) ◽  
pp. 677-684 ◽  
Author(s):  
Michael C. Wimberly ◽  
Aashis Lamsal ◽  
Paolla Giacomo ◽  
Ting-Wu Chuang
Keyword(s):  
United States ◽  
West Nile Virus ◽  
Regional Variation ◽  
The United States ◽  
West Nile

scholarly journals Fatal Hemorrhagic Fever Caused by West Nile Virus in the United States

2006 ◽  
Vol 42 (11) ◽  
pp. 1527-1535 ◽  
Author(s):  
C. D. Paddock ◽  
W. L. Nicholson ◽  
J. Bhatnagar ◽  
C. S. Goldsmith ◽  
P. W. Greer ◽  
...  
Keyword(s):  
United States ◽  
West Nile Virus ◽  
Hemorrhagic Fever ◽  
The United States ◽  
West Nile

scholarly journals Complete Genome Sequences of Mycobacteriophages OKaNui and DroogsArmy

2020 ◽  
Vol 9 (33) ◽  
Author(s):  
Kayla M. Fast ◽  
Kadaisha G. Johnson ◽  
Kaitlyn N. Mayfield ◽  
Leah A. Stephens ◽  
T. Hunter Reid ◽  
...  
Keyword(s):  
United States ◽  
Mycobacterium Smegmatis ◽  
Complete Genome ◽  
The United States ◽  
Genome Sequences ◽  
Bacterial Host ◽  
Content Type

ABSTRACT Mycobacteriophages OKaNui and DroogsArmy were isolated from soil using the bacterial host Mycobacterium smegmatis mc2155, which belongs to the phylum Actinobacteria. OKaNui was discovered in east Mississippi and DroogsArmy in west Alabama in the United States. The genomes of OKaNui and DroogsArmy were 51,424 bp and 53,254 bp long, respectively.

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