Biosaur: An open‐source Python software for liquid chromatography–mass spectrometry peptide feature detection with ion mobility support

Rapid Communications in Mass Spectrometry ◽

10.1002/rcm.9045 ◽

2021 ◽

Author(s):

Daniil A. Abdrakhimov ◽

Julia A. Bubis ◽

Vladimir Gorshkov ◽

Frank Kjeldsen ◽

Mikhail V. Gorshkov ◽

...

Keyword(s):

Mass Spectrometry ◽

Liquid Chromatography ◽

Open Source ◽

Ion Mobility ◽

Feature Detection ◽

Liquid Chromatography Mass Spectrometry ◽

Mobility Support ◽

Chromatography Mass Spectrometry

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Open-Source Platform for the Analysis of Liquid Chromatography-Mass Spectrometry (LC-MS) Data

Methods in Molecular Biology™ - Clinical Proteomics ◽

10.1007/978-1-59745-117-8_19 ◽

2008 ◽

pp. 369-381 ◽

Cited By ~ 4

Author(s):

Matthew Fitzgibbon ◽

Wendy Law ◽

Damon May ◽

Andrea Detter ◽

Martin McIntosh

Keyword(s):

Mass Spectrometry ◽

Liquid Chromatography ◽

Open Source ◽

Liquid Chromatography Mass Spectrometry ◽

Chromatography Mass Spectrometry

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MSTracer: A Machine Learning Software Tool for Peptide Feature Detection from Liquid Chromatography–Mass Spectrometry Data

Journal of Proteome Research ◽

10.1021/acs.jproteome.0c01029 ◽

2021 ◽

Author(s):

Xiangyuan Zeng ◽

Bin Ma

Keyword(s):

Machine Learning ◽

Mass Spectrometry ◽

Liquid Chromatography ◽

Feature Detection ◽

Software Tool ◽

Mass Spectrometry Data ◽

Liquid Chromatography Mass Spectrometry ◽

Chromatography Mass Spectrometry ◽

Learning Software

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Ion-Mobility-Based Liquid Chromatography–Mass Spectrometry Quantitation of Taste-Enhancing Octadecadien-12-ynoic Acids in Mushrooms

Journal of Agricultural and Food Chemistry ◽

10.1021/acs.jafc.0c02034 ◽

2020 ◽

Vol 68 (20) ◽

pp. 5741-5751 ◽

Cited By ~ 1

Author(s):

Verena Karolin Mittermeier ◽

Katja Pauly ◽

Andreas Dunkel ◽

Thomas Hofmann

Keyword(s):

Mass Spectrometry ◽

Liquid Chromatography ◽

Ion Mobility ◽

Liquid Chromatography Mass Spectrometry ◽

Chromatography Mass Spectrometry

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Rapid profiling method for the analysis of lipids in human plasma using ion mobility enabled-reversed phase-ultra high performance liquid chromatography/mass spectrometry

Journal of Chromatography A ◽

10.1016/j.chroma.2019.460597 ◽

2020 ◽

Vol 1611 ◽

pp. 460597 ◽

Cited By ~ 3

Author(s):

Adam M King ◽

Robert D Trengove ◽

Lauren G Mullin ◽

Paul D Rainville ◽

Giorgis Isaac ◽

...

Keyword(s):

Mass Spectrometry ◽

High Performance Liquid Chromatography ◽

Liquid Chromatography ◽

Human Plasma ◽

Ion Mobility ◽

High Performance ◽

Reversed Phase ◽

Liquid Chromatography Mass Spectrometry ◽

Chromatography Mass Spectrometry

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Confirmation of diosmetin 3-O-glucuronide as major metabolite of diosmin in humans, using micro-liquid-chromatography–mass spectrometry and ion mobility mass spectrometry

Analytical and Bioanalytical Chemistry ◽

10.1007/s00216-013-7237-y ◽

2013 ◽

Vol 405 (25) ◽

pp. 8295-8310 ◽

Cited By ~ 27

Author(s):

Luigi Silvestro ◽

Isabela Tarcomnicu ◽

Constanta Dulea ◽

Nageswara Rao B. N. Attili ◽

Valentin Ciuca ◽

...

Keyword(s):

Mass Spectrometry ◽

Liquid Chromatography ◽

Ion Mobility ◽

Major Metabolite ◽

Ion Mobility Mass Spectrometry ◽

Liquid Chromatography Mass Spectrometry ◽

Chromatography Mass Spectrometry

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High sensitivity and specificity feature detection in liquid chromatography–mass spectrometry data: A deep learning framework

Talanta ◽

10.1016/j.talanta.2020.121580 ◽

2021 ◽

Vol 222 ◽

pp. 121580

Author(s):

Fan Zhao ◽

Shuai Huang ◽

Xiaozhe Zhang

Keyword(s):

Mass Spectrometry ◽

Liquid Chromatography ◽

Deep Learning ◽

Sensitivity And Specificity ◽

Feature Detection ◽

High Sensitivity ◽

Mass Spectrometry Data ◽

Liquid Chromatography Mass Spectrometry ◽

Learning Framework ◽

Chromatography Mass Spectrometry

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Ion mobility and liquid chromatography/mass spectrometry strategies for exhaled breath condensate glucose quantitation in cystic fibrosis studies

Rapid Communications in Mass Spectrometry ◽

10.1002/rcm.6683 ◽

2013 ◽

Vol 27 (20) ◽

pp. 2263-2271 ◽

Cited By ~ 14

Author(s):

María Eugenia Monge ◽

José J. Pérez ◽

Prabha Dwivedi ◽

Manshui Zhou ◽

Nael A. McCarty ◽

...

Keyword(s):

Mass Spectrometry ◽

Cystic Fibrosis ◽

Liquid Chromatography ◽

Ion Mobility ◽

Exhaled Breath Condensate ◽

Exhaled Breath ◽

Liquid Chromatography Mass Spectrometry ◽

Chromatography Mass Spectrometry ◽

Breath Condensate

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Separation of Isomeric O-Glycans by Ion Mobility and Liquid Chromatography–Mass Spectrometry

Analytical Chemistry ◽

10.1021/acs.analchem.9b01772 ◽

2019 ◽

Vol 91 (16) ◽

pp. 10604-10613 ◽

Cited By ~ 9

Author(s):

Chunsheng Jin ◽

David J. Harvey ◽

Weston B. Struwe ◽

Niclas G. Karlsson

Keyword(s):

Mass Spectrometry ◽

Liquid Chromatography ◽

Ion Mobility ◽

Liquid Chromatography Mass Spectrometry ◽

Chromatography Mass Spectrometry

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Multiple Enzymatic Digestions and Ion Mobility Separation Improve Quantification of Bacterial Ribosomal Proteins by Data Independent Acquisition Liquid Chromatography−Mass Spectrometry

Analytical Chemistry ◽

10.1021/ac404020j ◽

2014 ◽

Vol 86 (9) ◽

pp. 4264-4270 ◽

Cited By ~ 11

Author(s):

Romel P. Dator ◽

Kirk W. Gaston ◽

Patrick A. Limbach

Keyword(s):

Mass Spectrometry ◽

Liquid Chromatography ◽

Ion Mobility ◽

Ribosomal Proteins ◽

Liquid Chromatography Mass Spectrometry ◽

Mobility Separation ◽

Data Independent Acquisition ◽

Chromatography Mass Spectrometry ◽

Ion Mobility Separation

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Ion mobility spectrometry combined with ultra performance liquid chromatography/mass spectrometry for metabolic phenotyping of urine: Effects of column length, gradient duration and ion mobility spectrometry on metabolite detection

Analytica Chimica Acta ◽

10.1016/j.aca.2017.06.020 ◽

2017 ◽

Vol 982 ◽

pp. 1-8 ◽

Cited By ~ 31

Author(s):

Paul D. Rainville ◽

Ian D. Wilson ◽

Jeremy K. Nicholson ◽

Giorgis Isaac ◽

Lauren Mullin ◽

...

Keyword(s):

Mass Spectrometry ◽

Liquid Chromatography ◽

Ion Mobility Spectrometry ◽

Ion Mobility ◽

Ultra Performance Liquid Chromatography ◽

Column Length ◽

Liquid Chromatography Mass Spectrometry ◽

Metabolic Phenotyping ◽

Chromatography Mass Spectrometry ◽

Metabolite Detection

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