Importance of hydrophobic cluster formation through long-range contacts in the folding transition state of two-state proteins

2004 ◽  
Vol 55 (4) ◽  
pp. 1023-1035 ◽  
Author(s):  
S. Selvaraj ◽  
M. Michael Gromiha
Keyword(s):  
Transition State ◽  
Long Range ◽  
Cluster Formation ◽  
Hydrophobic Cluster

Conformational studies on cyclic tetrapeptides: Hydrophobic cluster formation

Peptides 1994 ◽  
1995 ◽  
pp. 521-522
Author(s):  
R. K. Konat ◽  
S. Golic Grdadolnik ◽  
W. Schmitt ◽  
H. Kessler
Keyword(s):  
Cluster Formation ◽  
Conformational Studies ◽  
Hydrophobic Cluster ◽  
Cyclic Tetrapeptides

Long-range transition state theory

2005 ◽  
Vol 122 (19) ◽  
pp. 194103 ◽  
Author(s):  
Yuri Georgievskii ◽  
Stephen J. Klippenstein
Keyword(s):  
Transition State ◽  
Long Range ◽  
Transition State Theory ◽  
State Theory

Pseudorapidity distribution and cluster formation in 50 and 400 GeV/c hadron–nucleus interactions

1984 ◽  
Vol 62 (3) ◽  
pp. 230-238 ◽  
Author(s):  
M. Irfan ◽  
H. Khushnood ◽  
A. Shakeel ◽  
A. R. Khan ◽  
M. Shafi
Keyword(s):  
Long Range ◽  
Short Range ◽  
Dominant Role ◽  
Cluster Formation ◽  
Pseudorapidity Distribution ◽  
Appreciable Change ◽  
Long Range Correlations ◽  
Rapidity Gap ◽  
Rapidity Distributions ◽  
Short Range Correlations

From the study of the pseudorapidity, η, distributions of charged shower particles produced in 50 GeV/c π− – nucleus and 400 GeV/c proton (p)–nucleus collisions, and their dependence on various parameters, the maxima of η distributions are noticed to shift towards smaller values of η with increasing Ng. Bimodality in the η distributions for all Ng groups has been observed to be completely absent in 50 GeV/c π− – nucleus interactions. Furthermore, the value of [Formula: see text] is found to decrease monotonically with increasing Ng, Ns, and Nh. The dispersions of the rapidity distributions D(η) do not, however, demonstrate any tendency of appreciable change with increasing Ng, except in the region of small Ng values. Finally, study of rapidity-gap length distributions reveals that the two-particle short-range correlations play a dominant role while the contribution of long-range correlations seems to be quite small.

Hydrophobic Cluster Formation Is Necessary for Dibenzofuran-Based Amino Acids to Function as .beta.-Sheet Nucleators

1994 ◽  
Vol 116 (9) ◽  
pp. 3988-4005 ◽  
Author(s):  
Kwok Yin Tsang ◽  
Humberto Diaz ◽  
Nilsa Graciani ◽  
Jeffery W. Kelly
Keyword(s):  
Amino Acids ◽  
Cluster Formation ◽  
Beta Sheet ◽  
Hydrophobic Cluster
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