Use of capture-recapture models with mark-resight data to estimate abundance of Aleutian cackling geese

2013 ◽  
Vol 77 (7) ◽  
pp. 1459-1471 ◽  
Author(s):  
Todd A. Sanders ◽  
Robert E. Trost
Keyword(s):  
Capture Recapture ◽  
Cackling Geese

Capture recapture électroniques en phosphorescence

1952 ◽  
Vol 12 (7) ◽  
pp. 749-801 ◽  
Author(s):  
Daniel Curie
Keyword(s):  
Capture Recapture

Development of Microsatellite Loci Exhibiting Reverse Ascertainment Bias and a Sexing Marker for use in Emperor Geese (Chen Canagica)

2017 ◽  
Vol 10 (4) ◽  
pp. 201-210 ◽  
Author(s):  
Meg C. Gravley ◽  
George K. Sage ◽  
Joel A. Schmutz ◽  
Sandra L. Talbot
Keyword(s):  
Microsatellite Loci ◽  
Statistical Power ◽  
Ascertainment Bias ◽  
Next Generation Sequencing Technology ◽  
Branta Bernicla ◽  
Black Brant ◽  
Expected Heterozygosity ◽  
Cackling Geese ◽  
The 1960S ◽  
Goose Species

The Alaskan population of Emperor Geese ( Chen canagica) nests on the Yukon–Kuskokwim Delta in western Alaska. Numbers of Emperor Geese in Alaska declined from the 1960s to the mid-1980s and since then, their numbers have slowly increased. Low statistical power of microsatellite loci developed in other waterfowl species and used in previous studies of Emperor Geese are unable to confidently assign individual identity. Microsatellite loci for Emperor Goose were therefore developed using shotgun amplification and next-generation sequencing technology. Forty-one microsatellite loci were screened and 14 were found to be polymorphic in Emperor Geese. Only six markers – a combination of four novel loci and two loci developed in other waterfowl species – are needed to identify an individual from among the Alaskan Emperor Goose population. Genetic markers for identifying sex in Emperor Geese were also developed. The 14 novel variable loci and 15 monomorphic loci were screened for polymorphism in four other Arctic-nesting goose species, Black Brant ( Branta bernicla nigricans), Greater White-fronted ( Anser albifrons), Canada ( B. canadensis) and Cackling ( B. hutchinsii) Goose. Emperor Goose exhibited the smallest average number of alleles (3.3) and the lowest expected heterozygosity (0.467). Greater White-fronted Geese exhibited the highest average number of alleles (4.7) and Cackling Geese the highest expected heterozygosity (0.599). Six of the monomorphic loci were variable and able to be characterised in the other goose species assayed, a predicted outcome of reverse ascertainment bias. These findings fail to support the hypothesis of ascertainment bias due to selection of microsatellite markers.

An Urn Model for the Multi-Sample Capture/Recapture Sequential Tagging Process.

1987 ◽  
Author(s):  
Jose G. Leite ◽  
Carlos A. De Braganca Pereira
Keyword(s):  
Urn Model ◽  
Capture Recapture

Estimating the population size of people who inject drugs in Ho Chi Minh City, Vietnam: A two-survey capture-recapture exercise (Preprint)

2019 ◽  
Author(s):  
Abu Abdul-Quader
Keyword(s):  
Population Size ◽  
Illicit Drugs ◽  
People Who Inject Drugs ◽  
Care Service ◽  
Ho Chi Minh City ◽  
Size Estimation ◽  
Population Size Estimates ◽  
Capture Recapture ◽  
The City ◽  
Size Estimates

BACKGROUND Population size estimation of people who inject drugs (PWID) in Ho Chi Minh City (HCMC), Vietnam relied on the UNAIDS Estimation and Projection Package and reports from the city police department. The two estimates vary widely. OBJECTIVE To estimate the population size of people who inject drugs in Ho Chi Minh City, Vietnam METHODS Using Respondent-driven sampling (RDS), we implemented two-source capture-recapture method to estimate the population size of PWID in HCMC in 2017 in 7 out of 24 districts. The study included men or women aged at least 18 years who reported injecting illicit drugs in the last 90 days and who had lived in the city the past six months. We calculated two sets of size estimates, the first assumed that all participants in each survey round resided in the district where the survey was conducted, the second, used the district of residence as reported by the participant. District estimates were summed to obtain an aggregate estimate for the seven districts. To calculate the city total, we weighted the population size estimates for each district by the inverse of the stratum specific sampling probabilities. RESULTS The first estimate resulted in a population size of 19,155 (95% CI: 17,006–25,039). The second one generated a smaller population size estimate of 12,867 (95% CI: 11,312–17,393). CONCLUSIONS The two-survey capture-recapture exercise provided two disparate estimates of PWID in HCMC. For planning HIV prevention and care service needs among PWID in HCMC, both estimates may need to be taken into consideration together with size estimates from other sources.

Multiple sclerosis prevalence in Malaga, Southern Spain estimated by the capture–recapture method

2011 ◽  
Vol 18 (3) ◽  
pp. 372-376 ◽  
Author(s):  
O Fernández ◽  
V Fernández ◽  
M Guerrero ◽  
A León ◽  
JC López-Madrona ◽  
...  
Keyword(s):  
Multiple Sclerosis ◽  
Prevalence Rate ◽  
Latitudinal Gradient ◽  
Southern Spain ◽  
Median Frequency ◽  
Mediterranean Countries ◽  
Current Prevalence ◽  
Capture Recapture ◽  
High Figure ◽  
Southern European Countries

Background: Although not definitively proven, there is commonly accepted to be a latitudinal gradient in the distribution of multiple sclerosis (MS), which is more frequent in temperate zones. The European Mediterranean countries are situated in a zone of median frequency, although ever increasing figures have been noted in the last decades. Objective: The objective of this study was to assess the current prevalence rate of MS in the province of Malaga, Southern Spain. Methods: The capture–recapture method (CRM) uses independent sources of data and permits the number of non-registered cases of a given disease to be estimated, and by doing so, to avoid ascertainment bias. Results: Use of this method showed the estimated prevalence rate of MS in the province of Malaga, Southern Spain, to be 125/105 (95% confidence interval: 102/105–169/105), higher than the figures published previously. Conclusions: Although we recognize that these data need to be confirmed in further studies and in other areas of the country using a similar method, we believe this study is the first to find such high figure of prevalence, being very similar to the figures reported in recent years in other southern European countries.

scholarly journals Non-Invasive Molecular Survey of Sarcoptic Mange in Wildlife: Diagnostic Performance in Wolf Faecal Samples Evaluated by Multi-Event Capture–Recapture Models

Pathogens ◽  
2021 ◽  
Vol 10 (2) ◽  
pp. 243
Author(s):  
Julieta Rousseau ◽  
Mónia Nakamura ◽  
Helena Rio-Maior ◽  
Francisco Álvares ◽  
Rémi Choquet ◽  
...  
Keyword(s):  
Molecular Detection ◽  
High Specificity ◽  
Sarcoptes Scabiei ◽  
Sarcoptic Mange ◽  
Diagnostic Specificity ◽  
Non Invasive ◽  
Faecal Samples ◽  
Capture Recapture ◽  
The Mean ◽  
Event Capture

Sarcoptic mange is globally enzootic, and non-invasive methods with high diagnostic specificity for its surveillance in wildlife are lacking. We describe the molecular detection of Sarcoptes scabiei in non-invasively collected faecal samples, targeting the 16S rDNA gene. We applied this method to 843 Iberian wolf Canis lupus signatus faecal samples collected in north-western Portugal (2006–2018). We further integrated this with serological data (61 samples from wolf and 20 from red fox Vulpes vulpes, 1997–2019) in multi-event capture–recapture models. The mean predicted prevalence by the molecular analysis of wolf faecal samples from 2006–2018 was 7.2% (CI95 5.0–9.4%; range: 2.6–11.7%), highest in 2009. The mean predicted seroprevalence in wolves was 24.5% (CI95 18.5–30.6%; range: 13.0–55.0%), peaking in 2006–2009. Multi-event capture–recapture models estimated 100% diagnostic specificity and moderate diagnostic sensitivity (30.0%, CI95 14.0–53.0%) for the molecular method. Mange-infected individually identified wolves showed a tendency for higher mortality versus uninfected wolves (ΔMortality 0.150, CI95 −0.165–0.458). Long-term serology data highlights the endemicity of sarcoptic mange in wild canids but uncovers multi-year epidemics. This study developed and evaluated a novel method for surveying sarcoptic mange in wildlife populations by the molecular detection of S. scabiei in faecal samples, which stands out for its high specificity and non-invasive character.

scholarly journals FRI0337 INCIDENCE AND PREVALENCE OF MYOSITIS ASSESSED BY MULTI-SOURCES CAPTURE-RECAPTURE METHODOLOGY

2019 ◽  
Author(s):  
alain meyer ◽  
Léa Debrut ◽  
Lionel Spielmann ◽  
Gilles Blaison ◽  
Pierre Kieffer ◽  
...  
Keyword(s):  
Capture Recapture
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