Effects of Ice Nucleation Protein Repeat Number and Oligomerization Level on Ice Nucleation Activity

2018 ◽  
Vol 123 (3) ◽  
pp. 1802-1810 ◽  
Author(s):  
M. L. Ling ◽  
H. Wex ◽  
S. Grawe ◽  
J. Jakobsson ◽  
J. Löndahl ◽  
...  
Keyword(s):  
Ice Nucleation ◽  
Repeat Number ◽  
Ice Nucleation Protein ◽  
Nucleation Activity ◽  
Ice Nucleation Activity

scholarly journals Effects of atmospheric conditions on ice nucleation activity of <i>Pseudomonas</i>

2012 ◽  
Vol 12 (22) ◽  
pp. 10667-10677 ◽  
Author(s):  
E. Attard ◽  
H. Yang ◽  
A.-M. Delort ◽  
P. Amato ◽  
U. Pöschl ◽  
...  
Keyword(s):  
Environmental Factors ◽  
Pseudomonas Syringae ◽  
Ice Nucleation ◽  
Acidic Ph ◽  
Bacterial Cells ◽  
Atmospheric Conditions ◽  
Ice Nucleation Protein ◽  
Ice Melt ◽  
Nucleation Activity ◽  
Ice Nucleation Activity

Abstract. Although ice nuclei from bacterial origin are known to be efficient at the highest temperatures known for ice catalysts, quantitative data are still needed to assess their role in cloud processes. Here we studied the effects of three typical cloud conditions (i) acidic pH (ii) NO2 and O3 exposure and (iii) UV-A exposure on the ice nucleation activity (INA) of four Pseudomonas strains. Three of the Pseudomonas syringae strains were isolated from cloud water and the phyllosphere and Pseudomonas fluorescens strain CGina-01 was isolated from Antarctic glacier ice melt. Among the three conditions tested, acidic pH caused the most significant effects on INA likely due to denaturation of the ice nucleation protein complex. Exposure to NO2 and O3 gases had no significant or only weak effects on the INA of two P. syringae strains whereas the INA of P. fluorescens CGina-01 was significantly affected. The INA of the third P. syringae strain showed variable responses to NO2 and O3 exposure. These differences in the INA of different Pseudomonas suggest that the response to atmospheric conditions could be strain-specific. After UV-A exposure, a substantial loss of viability of all four strains was observed whereas their INA decreased only slightly. This corroborates the notion that under certain conditions dead bacterial cells can maintain their INA. Overall, the negative effects of the three environmental factors on INA were more significant at the warmer temperatures. Our results suggest that in clouds where temperatures are near 0 °C, the importance of bacterial ice nucleation in precipitation processes could be reduced by some environmental factors.

scholarly journals Effects of atmospheric conditions on ice nucleation activity of <i>Pseudomonas</i>

2012 ◽  
Vol 12 (4) ◽  
pp. 9491-9516 ◽  
Author(s):  
E. Attard ◽  
H. Yang ◽  
A.-M. Delort ◽  
P. Amato ◽  
U. Pöschl ◽  
...  
Keyword(s):  
Environmental Factors ◽  
Pseudomonas Syringae ◽  
Ice Nucleation ◽  
Acidic Ph ◽  
Bacterial Cells ◽  
Atmospheric Conditions ◽  
Ice Nucleation Protein ◽  
Ice Melt ◽  
Nucleation Activity ◽  
Ice Nucleation Activity

Abstract. Although ice nuclei from bacterial origin are known to be efficient at the highest temperatures known for ice catalysts, quantitative data are still needed to assess their role in cloud processes. Here we studied the effects of three typical cloud conditions (i) acidic pH (ii) NO2 and O3 exposure and (iii) UV-A exposure on the ice nucleation activity (INA) of four Pseudomonas strains. Three of the Pseudomonas syringae strains were isolated from cloud water and the phyllosphere and Pseudomonas fluorescens strain CGina-01 was isolated from Antarctic glacier ice melt. Among the three conditions tested, acidic pH caused the most significant effects on INA likely due to denaturation of the ice nucleation protein complex. Exposure to NO2 and O3 gases had no significant or only weak effects on the INA of two P. syringae strains whereas the INA of P. fluorescens CGina-01 was significantly affected. The INA of the third P. syringae strain showed variable responses to NO2 and O3 exposure. These differences in the INA of different Pseudomonas suggest that the response to atmospheric conditions could be strain-specific. After UV-A exposure, a substantial loss of viability of all four strains was observed whereas their INA decreased only slightly. This corroborates the notion that under certain conditions dead bacterial cells can maintain their INA. Overall, the negative effects of the three environmental factors on INA were more significant at the warmer temperatures. Our results suggest that in clouds where temperatures are near 0 °C, the importance of bacterial ice nucleation in precipitation processes could be reduced by some environmental factors.

Clustering of ice nucleation protein correlates with ice nucleation activity

Cryobiology ◽  
1990 ◽  
Vol 27 (4) ◽  
pp. 416-422 ◽  
Author(s):  
Gunhild M. Mueller ◽  
Paul K. Wolber ◽  
Gareth J. Warren
Keyword(s):  
Ice Nucleation ◽  
Ice Nucleation Protein ◽  
Nucleation Activity ◽  
Ice Nucleation Activity

scholarly journals Characterization and recombinant expression of a divergent ice nucleation protein from ‘Pseudomonas borealis’

Microbiology ◽  
2009 ◽  
Vol 155 (4) ◽  
pp. 1164-1169 ◽  
Author(s):  
Zhongqin Wu ◽  
Lei Qin ◽  
Virginia K. Walker
Keyword(s):  
Recombinant Expression ◽  
Ice Nucleation ◽  
The Other ◽  
Chromosome Walking ◽  
Ice Nucleation Protein ◽  
Flat Surfaces ◽  
Nucleation Activity ◽  
Sequence Encoding ◽  
Ice Nucleation Activity ◽  
Selection Of

Isolates of ‘Pseudomonas borealis’ were recovered after ice-affinity selection of summer-collected soils. ‘P. borealis’ DL7 was further characterized and shown to have ice nucleation activity (INA), a property that allows the crystallization of ice at temperatures close to the melting point, effectively preventing the supercooling of water. INA was optimally detected after culturing at temperatures consistent with psychrophilic growth. The sequence encoding the ‘P. borealis’ ice nucleation protein (INP) was obtained using both PCR and chromosome walking. When expressed in Escherichia coli, the resulting inaPb recombinants had INA. The ‘P. borealis’ sequence, dubbed inaPb, is clearly related to previously cloned INP genes, but it shows greater divergence. Sequence analysis suggests that there are two opposite flat surfaces, one relatively hydrophobic that likely serves as an ice template, and the other that could function as a complementary face to facilitate interprotein interaction for ice-step formation.

Release of Cell-Free Ice Nucleators from Three Recombinant Ice+Zymomonas mobilis Strains

2015 ◽  
Vol 25 (4) ◽  
pp. 277-283
Author(s):  
Athanasia Varsaki ◽  
Angelos Perisynakis ◽  
Constantin Drainas
Keyword(s):  
Growth Medium ◽  
Zymomonas Mobilis ◽  
Ice Nucleation ◽  
Temperature Threshold ◽  
Decarboxylase Activity ◽  
Ice Nucleation Protein ◽  
Produce Cell ◽  
Ice Nucleators ◽  
Nucleation Activity ◽  
Ice Nucleation Activity

<b><i>Background/Aims:</i></b> This work is a study of the ability of three recombinant <i>Zymomonas mobilis </i>strains to release ice nucleators into their growth medium. <b><i>Methods:</i></b> The recombinant ice<sup>+</sup><i>Z. mobilis</i> cells were tested for their ability to produce cell-free ice nucleators, under three different growth temperatures and three different glucose concentrations. <b><i>Results:</i></b> Cell-free ice nucleators were obtained from all the recombinant ice<sup>+</sup><i>Z. mobilis</i> cells tested. The cell-free ice nucleation activity was not affected by the glucose concentration in the growth medium or the growth temperature. The freezing temperature threshold was below -7.6°C, demonstrating a class C nucleating structure of the ice nucleation protein. The size of the ice nucleators was less than 0.22 μm and their density was estimated as 1.024 ± 0.004 g/ml by Percoll density centrifugation. The properties of the detected ice nucleators, in addition to the absence of pyruvate decarboxylase activity in the spent medium (a cytosolic marker), support that the cell-free ice nucleation activity was due to the extracellular release of ice nucleators. <b><i>Conclusion:</i></b> These findings indicate that the recombinant ice<sup>+</sup><i>Z. mobilis</i> cells could be valuable for future use as a source of active cell-free ice nucleation protein.

scholarly journals Seasonal ice nucleation activity of water samples from alpine rivers and lakes in Obergurgl, Austria

2021 ◽  
pp. 149442
Author(s):  
Philipp Baloh ◽  
Regina Hanlon ◽  
Christopher Anderson ◽  
Eoin Dolan ◽  
Gernot Pacholik ◽  
...  
Keyword(s):  
Water Samples ◽  
Ice Nucleation ◽  
Rivers And Lakes ◽  
Nucleation Activity ◽  
Alpine Rivers ◽  
Ice Nucleation Activity

Ice nucleation activity of iron oxides via immersion freezing and an examination of the high ice nucleation activity of FeO

2021 ◽  
Vol 23 (5) ◽  
pp. 3565-3573
Author(s):  
Esther Chong ◽  
Katherine E. Marak ◽  
Yang Li ◽  
Miriam Arak Freedman
Keyword(s):  
Iron Oxides ◽  
Functional Groups ◽  
Ice Nucleation ◽  
Mechanical Processing ◽  
Immersion Freezing ◽  
Nucleation Activity ◽  
Ice Nucleation Activity

FeO has enhanced ice nucleation activity due to functional groups that are exposed upon mechanical processing.

scholarly journals Ice nucleation activity identified in some phytopathogenic Fusarium species

2005 ◽  
Vol 77 (2) ◽  
pp. 83-92 ◽  
Author(s):  
C. Richard ◽  
J.-G. Martin ◽  
S. Pouleur
Keyword(s):  
Fusarium Oxysporum ◽  
Fusarium Species ◽  
Freezing Temperature ◽  
Ice Nucleation ◽  
Free Living ◽  
Factors Affecting ◽  
Pure Cultures ◽  
Nucleation Activity ◽  
Ice Nucleation Activity ◽  
Positive Controls

In order to know which species of Fusarium are ice nucleating and to determine the factors affecting their pathogenicity, ice nucleation activity (INA) was examined in Fusarium oxysporum, F. sporotrichioides, and F. tricinctum. Positive controls (lna+) used were F. acuminatum and F. avenaceum. The test for fungal INA was done with a simple and rapid tube nucleation assay. Twelve out of the 42 F. oxysporum isolates, and 8 out of 14 F. tricinctum isolates were lna+. No INA was detected in F sporotrichioides. In this test the threshold freezing temperature tended to increase with culture age, reaching a peak of -1°C in a few samples, which is as high as the warmest INA reported for bacteria, and higher than the INA detected in pure cultures of free-living fungi, lichen fungi, lichen algae and cyanobacteria. This is the first report of INA for F oxysporum.

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