scholarly journals Frequent discordance between morphology and mitochondrial DNA in a species group of European water beetles (Coleoptera: Dytiscidae)

PeerJ ◽  
2017 ◽  
Vol 5 ◽  
pp. e3076
Author(s):  
David T. Bilton ◽  
Lucy Turner ◽  
Garth N. Foster
Keyword(s):  
Mitochondrial Dna ◽  
Sequence Data ◽  
Introgressive Hybridization ◽  
Species Group ◽  
Central Spain ◽  
Water Beetles ◽  
Mitochondrial Coi ◽  
Dna Sequence Variation ◽  
Western Palaearctic ◽  
Evolutionary Lineages

TheHydroporus memnoniusspecies group includes both widespread and range restricted diving beetle taxa in the western Palaearctic, some of which have been divided into a number of geographical subspecies. Of these,Hydroporus necopinatusis distributed in the far west of Europe, from central Spain to southern Britain, and has been split into three subspecies, occurring in Iberia (necopinatussst.), France (robertorum) and England (roni) respectively—the last of these being a rare example of an insect taxon apparently endemic to northern Europe. Here we explore inter-relationships between populations and subspecies ofH. necopinatusand related members of theHydroporus melanariussubgroup, using mitochondrial COI sequence data. We reveal widespread discordance between mitochondrial DNA sequence variation and morphology in areas whereH. necopinatusandH. melanariuscome into contact, consistent with historical introgressive hybridization between these taxa. In light of this discordance, the lack of clear genetic divergence betweenH. necopinatussubspecies, and the fact that bothrobertorumandroniare morphologically intermediate betweenH. necopinatussstr. andH. melanarius, we suggest that these taxa may be of hybridogenic origin, rather than representing discrete evolutionary lineages.

Baetis pentaphyllus sp. nov., a new species of mayfly (Ephemeroptera: Baetidae) from the Russian Far East

Zootaxa ◽  
2019 ◽  
Vol 4679 (2) ◽  
pp. 341-352
Author(s):  
TATIANA M. TIUNOVA ◽  
ALEXANDER A. SEMENCHENKO
Keyword(s):  
New Species ◽  
Sequence Data ◽  
Russian Far East ◽  
Far East ◽  
Species Group ◽  
Mitochondrial Coi ◽  
Sister Clade ◽  
Species Groups ◽  
Coi Sequences ◽  
A New Species

A new species, Baetis pentaphyllus sp. nov., is described on the basis of larvae from the Far East of Russia (type locality Bolshoi Garmakan River). Larvae of Baetis pentaphyllus sp. nov. may be distinguished from other Baetis species by the presence of only five pairs of tergalii on segments III–VII. The mitochondrial COI sequence obtained from the described species was compared with the data present in GeneBank and BOLD. The DNA barcodes allowed discrimination of B. pentaphyllus sp. nov. from other species of Baetis with available sequence data. The average interspecific K2P distances were 10–15%, which are values well above those associated with intraspecific variation. COI sequences as well as 36 morphological larval characters were analysed using Bayesian inference to relate the described species to the recognized species-groups of the Baetis genus. B. pentaphyllus sp. nov formed a sister clade to B. vardarensis + B. lutheri which belong to the Baetis lutheri species-group. 

scholarly journals Phylogenetic relationships of the European newts (genus Triturus) tested with mitochondrial DNA sequence data

1999 ◽  
Vol 68 (2) ◽  
pp. 73-81 ◽  
Author(s):  
I. Zajc ◽  
J.W. Arntzen
Keyword(s):  
Mitochondrial Dna ◽  
Sequence Data ◽  
A Priori ◽  
Strong Support ◽  
Species Group ◽  
Rrna Genes ◽  
Sister Taxon ◽  
Phylogenetic Position ◽  
12S Rrna ◽  
16S Rrna Sequence

European newts (genus Triturus) are widely studied, but their phylogeny is not yet unambiguously resolved. Fragments of mitochondrial DNA experiencing different rates of evolution (the ATPase and 12S rRNA genes) were sequenced in order to test a phylogenetic hypothesis derived from biochemical and behavioral data. Well-supported branches of the existing phylogeny gained support in our study. The monophyletic origin of the hypothesized T. boscai – T. italicus clade remained ambiguous, whereas strong support was gained for the sister-taxon relationship of T. vulgaris and T. montandoni. The position of T. vittatus as a sister taxon to the T. marmoratus species group was also supported. The phylogenetic position of T. alpestris could not be clarified. With an in-group taxon sampling denser than in previous molecular phylogenetic studies and under the a priori selection of species from the genera Cynops, Neurergus and Paramesotriton as out-groups, the monophyly of Triturus was strongly supported. It cannot be excluded, however, that the presumed out-group actually belongs to the in-group, rendering Triturus paraphyletic as was concluded from recently published 12S and 16S rRNA sequence data.

Speciation patterns in the Forficula auricularia species complex: cryptic and not so cryptic taxa across the western Palaearctic region

2020 ◽  
Vol 190 (3) ◽  
pp. 788-823 ◽  
Author(s):  
Rubén González-Miguéns ◽  
Eva Muñoz-Nozal ◽  
Yolanda Jiménez-Ruiz ◽  
Paloma Mas-Peinado ◽  
Hamid R Ghanavi ◽  
...  
Keyword(s):  
Sequence Data ◽  
Niche Overlap ◽  
Forficula Auricularia ◽  
Evolutionary Trajectory ◽  
Mitochondrial Coi ◽  
Morphometric Analyses ◽  
Cryptic Taxa ◽  
Western Palaearctic ◽  
New Synonymy ◽  
European Earwig

Abstract Forficula auricularia (the European earwig) is possibly a complex of cryptic species. To test this hypothesis, we performed: (1) a phylogeographic study based on fragments of the mitochondrial COI and the nuclear ITS2 markers on a wide geographic sampling, (2) morphometric analyses of lineages present in Spain and (3) niche overlap analyses. We recovered five reciprocally monophyletic ancient phylogroups with unique historical patterns of distribution, climatic niches and diversification. External morphology was conserved and not correlated with speciation events, except in one case. Phylogenetic placement of the morphologically distinct taxon renders F. auricularia paraphyletic. Based on the congruence of the phylogenetic units defined by mtDNA and nuclear sequence data, we conclude that phylogroups have their own historical and future evolutionary trajectory and represent independent taxonomic units. Forficula auricularia is a complex of at least four species: the morphologically diagnosable Forficula aeolica González-Miguéns & García-París sp. nov., and the cryptic taxa: Forficula mediterranea González-Miguéns & García-París sp. nov., Forficula dentataFabricius, 1775stat. nov. and Forficula auriculariaLinnaeus, 1758s.s. We also provide new synonymy for F. dentata.

scholarly journals Revision of the West Palaearctic Euura bergmanni and oligospila groups (Hymenoptera, Tenthredinidae)

2021 ◽  
Vol 84 ◽  
pp. 187-269
Author(s):  
Marko Prous ◽  
Andrew Liston ◽  
Marko Mutanen
Keyword(s):  
Southern Hemisphere ◽  
Sequence Data ◽  
Species Discrimination ◽  
The West ◽  
Genetic Sequence ◽  
Mitochondrial Coi ◽  
Incertae Sedis ◽  
Males And Females ◽  
Western Palaearctic ◽  
Group Species

Eight Western Palaearctic Euura species are here assigned to the bergmanni group (bergmanni, brevivalvis, dispar, glutinosae, leptocephalus, respondens, sylvestris, and viridis) and two species to the oligospila group (frenalis and oligospila). Euura pallens (Konow, 1903) (bergmanni group) is removed from the list of West Palaearctic taxa. Euura pyramidalis (Hellén, 1948) is treated as incertae sedis within the bergmanni group. Definitions of the bergmanni and oligospila groups are primarily based on genetic sequence data (mitochondrial COI and nuclear NaK and POL2). We report likely occurrence of heteroplasmy and amplification of NUMTs among some of the treated species, complicating the use of DNA barcoding in species discrimination. Based on morphological and genetic evidence, we establish that the correct name for the invasive willow sawfly in the southern hemisphere (South America, southern Africa, Australia, New Zealand), known there only in the female sex, is Euura respondens (Förster, 1854). The species is probably native to the Palaearctic (or even Holarctic) where males are common: possibly as common as females (examined from Europe and Central Asia). The name Euura oligospila (Förster, 1854) has been incorrectly used for the species in the southern hemisphere. The examination of type material and reliable association of males and females based on genetics revealed that females of E. oligospila are morphologically extremely similar to E. respondens (and to some other E. bergmanni group species), but male penis valves and genetics enable reliable separation of these species. Morphological separation of females of E. oligospila and E. respondens is possible, but challenging. Identification keys for males and females of the bergmanni and oligospila groups are provided. The following 15 new synonymies are proposed: Nematus validicornis Förster, 1854, syn. nov. with Euura bergmanni (Dahlbom, 1835); Pteronidea woollatti Lindqvist, 1971, syn. nov. and Nematus turgaiensis Safjanov, 1977, syn. nov. with Euura brevivalvis (Thomson, 1871); Pteronidea pseudodispar Lindqvist, 1969, syn. nov. with Euura dispar (Zaddach, 1876); Nematus (Pteronidea) fastosus var. ponojense Hellén, 1948, syn. nov. and N. (P.) fastosus var. punctiscuta Hellén, 1948, syn. nov. with Euura frenalis (Thomson, 1888); Nematus declaratus Muche, 1974, syn. nov. and N. desantisi D.R. Smith, 1983, syn. nov. with Euura respondens (Förster, 1854); Pteronidea straminea Lindqvist, 1958, syn. nov., P. angustiserra Lindqvist, 1969, syn. nov., and P. disparoides Lindqvist, 1969, syn. nov. with Euura sylvestris (Cameron, 1884); Pteronidea breviseta Lindqvist, 1946, syn. nov., P. breviseta Lindqvist, 1949, syn. nov., P. abscondita Lindqvist, 1949, syn. nov., and P. lauroi Lindqvist, 1960, syn. nov. with Euura viridis (Stephens, 1835). Lectotypes are designated for 18 nominal taxa: Amauronematus longicornis Konow, 1897; A. spurcus Konow, 1904; Nematus bergmanni Dahlbom, 1835; N. brevivalvis Thomson, 1871; N. curtispina Thomson, 1871; N. (Pteronidea) fastosus var. ponojense Hellén, 1948; N. (P.) fastosus var. punctiscuta Hellén, 1948; N. glutinosae Cameron, 1882; N. microcercus Thomson, 1871; N. polyspilus Förster, 1854; N. prasinus Hartig, 1837; N. respondens Förster, 1854; N. salicivorus Cameron, 1882; N. validicornis Förster, 1854; N. virescens Hartig, 1837; Pteronidea curtispina var. luctuosa Enslin, 1916; Pteronus fastosus Konow, 1904; and P. pallens Konow, 1903.

scholarly journals Empria longicornis species group: taxonomic revision with notes on phylogeny and ecology (Hymenoptera, Tenthredinidae)

Zootaxa ◽  
2011 ◽  
Vol 2756 (1) ◽  
pp. 1 ◽  
Author(s):  
MARKO PROUS ◽  
MIKK HEIDEMAA ◽  
VILLU SOON
Keyword(s):  
Mitochondrial Dna ◽  
Dna Sequences ◽  
Host Plants ◽  
Taxonomic Revision ◽  
Species Group ◽  
Valid Species ◽  
Mitochondrial Coi ◽  
Species Phylogeny ◽  
Species Circumscription ◽  
Its1 And Its2

The Empria longicornis species group (Hymenoptera, Tenthredinidae) is revised. Empria japonica Heidemaa & Prous, sp. nov. is described from Japan. The lectotypes of Empria gussakovskii Dovnar-Zapolskij, 1929, E. konowi Dovnar-Zapolskij, 1929, Poecilosoma longicornis Thomson, 1871, P. mongolica Konow, 1895, and P. tridens Konow, 1896 are designated. Empria konowi Dovnar-Zapolskij, 1929 (syn. nov.) and E. gussakovskii Dovnar-Zapolskij, 1929 (syn. nov.) are synonymized with E. tridens (Konow, 1896), and Empria waldstaetterense Liston, 1980 (syn. nov.) with E. alector Benson, 1938. Empria alpina Benson, 1938 and E. minuta Lindqvist, 1968, earlier misidentified as E. gussakovskii, are treated as valid species. Nine species are confirmed to belong in the longicornis-group: E. alector, E. alpina, E. basalis, E. japonica, E. loktini, E. longicornis, E. minuta, E. mongolica, and E. tridens. Distributional data of the species and a key to the imagines are provided. Ex ovo rearings of the four most common and often misidentified species in the group (E. alector, E. basalis, E. longicornis, and E. tridens) were carried out to verify their host plants and male conspecifics. External morphology, morphometrics (geometric and traditional), and DNA sequences (mitochondrial COI and nuclear ITS1 and ITS2) are used to delimit species within the group and to assess their phylogenetic relationships. Mitochondrial DNA sequences analyzed are mostly regarded as unsuitable for species circumscription, DNA barcoding and for reconstructing species phylogeny within the group. In this regard, analyses of the ITS sequences yielded more concordant results.

Phylogenetic framework for Dioryctria (Lepidoptera: Pyralidae: Phycitinae) based on combined analysis of mitochondrial DNA and morphology

2005 ◽  
Vol 137 (6) ◽  
pp. 685-711 ◽  
Author(s):  
Yanli Du ◽  
Amanda D. Roe ◽  
Felix A.H. Sperling
Keyword(s):  
Mitochondrial Dna ◽  
Dna Sequences ◽  
Morphological Characters ◽  
Species Group ◽  
Morphological Data ◽  
Combined Analysis ◽  
Mitochondrial Coi ◽  
The North ◽  
Phylogenetic Framework ◽  
Species Groups

AbstractConeworms of the genus Dioryctria Zeller are important lepidopterous pests of conifer cones throughout the Holarctic region. Seventy-nine Dioryctria species are currently recognized and arranged into 11 species groups, but a globally unified classification of these species groups has not been attained. We surveyed 14 Dioryctria species belonging to 7 species groups recognized as being taxonomically problematic. Mitochondrial DNA sequences and morphological characters were used to resolve relationships among and within species groups and species. Sequences were obtained for 2.3 kb of the mitochondrial COI + COII genes and related to 52 morphological characters. Parsimony analyses of separate and combined data showed that (i) the five included Chinese species (D. abietella (Denis and Schiffermüller), D. rubella Hampson, D. nr. rubella, D. magnifica Munroe, and D. yiai Mutuura and Munroe) were distinct from the North American taxa, and their relationships were interspersed among Nearctic and European species; (ii) three of the four species groups represented by more than one species formed robust, well-supported clades (abietella group, sylvestrella group, and zimmermani group) for both mtDNA sequences and morphology; (iii) mtDNA and morphology gave conflicting interspecific and intergroup relationships for the auranticella, schuetzeella, ponderosae, and baumhoferi groups; (iv) all eight species for which more than one specimen was sampled were characterized by discrete clusters of mitochondrial DNA haplotypes, and mtDNA divergences among species in the same species group were generally less than those among species in different species groups; and (v) combining mtDNA data with morphological data increased support for most nodes in the phylogeny, with morphological characters providing support for species groups and mtDNA being essential for distinguishing species within species groups. This study demonstrates the value of a combined analysis of both mtDNA and morphological characters and establishes a phylogenetic framework for broader and more comprehensive studies of Dioryctria species.

Baetis majus sp. nov., new species of mayfly (Ephemeroptera: Baetidae) from Far East of Russia

Zootaxa ◽  
2021 ◽  
Vol 4965 (3) ◽  
pp. 541-557
Author(s):  
TATIANA M. TIUNOVA ◽  
ALEXANDER A. SEMENCHENKO ◽  
XIAOLI TONG
Keyword(s):  
New Species ◽  
Russian Far East ◽  
Far East ◽  
Morphological Characters ◽  
Species Group ◽  
Morphological Studies ◽  
Nearest Neighbours ◽  
Differential Identification ◽  
Coi Sequences ◽  
Western Palaearctic

A new species, Baetis majus Tiunova sp. nov., is described and illustrated based on larvae and reared adults discovered in the Russian Far East. The differential identification of this species was determined by the characteristics of other representatives of the genus Baetis Leach, including subgenera Baetis Leach and Tenuibaetis Kang & Yang from Eastern and Western Palaearctic, Nearctic and Oriental regions. In addition to morphological studies, DNA barcoding of the described species with average intraspecific K2P distances to nearest neighbours is documented. We reconstructed the phylogenetic relationships of all available cytochrome c oxidase subunit I (COI) sequences of the subgenera of Baetis and Tenuibaetis from four regions. Bayesian analysis using 47 morphological characters additional to partial COI sequences did not allow to determine the species-group of the Baetis genus to which the described species belongs. 

A new Liopeltis Fitzinger, 1843 (Squamata: Colubridae) from Pulau Tioman, Peninsular Malaysia

Zootaxa ◽  
2020 ◽  
Vol 4766 (3) ◽  
pp. 472-484
Author(s):  
HANNAH E. SOM ◽  
L. LEE GRISMER ◽  
PERRY L. JR. WOOD ◽  
EVAN S. H. QUAH ◽  
RAFE M. BROWN ◽  
...  
Keyword(s):  
Mitochondrial Dna ◽  
New Species ◽  
Dna Sequence ◽  
Rare Species ◽  
Sequence Data ◽  
Peninsular Malaysia ◽  
Tropical Asia ◽  
Dna Sequence Data ◽  
A New Species ◽  
Lines Of Evidence

Liopeltis is a genus of poorly known, infrequently sampled species of colubrid snakes in tropical Asia. We collected a specimen of Liopeltis from Pulau Tioman, Peninsular Malaysia, that superficially resembled L. philippina, a rare species that is endemic to the Palawan Pleistocene Aggregate Island Complex, western Philippines. We analyzed morphological and mitochondrial DNA sequence data from the Pulau Tioman specimen and found distinct differences to L. philippina and all other congeners. On the basis of these corroborated lines of evidence, the Pulau Tioman specimen is described as a new species, L. tiomanica sp. nov. The new species occurs in sympatry with L. tricolor on Pulau Tioman, and our description of L. tiomanica sp. nov. brings the number of endemic amphibians and reptiles on Pulau Tioman to 12. 

scholarly journals Adaptive radiation and hybridization in Wallace's Dreamponds: evidence from sailfin silversides in the Malili Lakes of Sulawesi

2006 ◽  
Vol 273 (1598) ◽  
pp. 2209-2217 ◽  
Author(s):  
Fabian Herder ◽  
Arne W Nolte ◽  
Jobst Pfaender ◽  
Julia Schwarzer ◽  
Renny K Hadiaty ◽  
...  
Keyword(s):  
New Species ◽  
Adaptive Radiation ◽  
Introgressive Hybridization ◽  
Reticulate Evolution ◽  
Species Group ◽  
Potential Force ◽  
Major Interest ◽  
Key Factor ◽  
Adaptive Radiations ◽  
Malili Lakes

Adaptive radiations are extremely useful to understand factors driving speciation. A challenge in speciation research is to distinguish forces creating novelties and those relevant to divergence and adaptation. Recently, hybridization has regained major interest as a potential force leading to functional novelty and to the genesis of new species. Here, we show that introgressive hybridization is a prominent phenomenon in the radiation of sailfin silversides (Teleostei: Atheriniformes: Telmatherinidae) inhabiting the ancient Malili Lakes of Sulawesi, correlating conspicuously with patterns of increased diversity. We found the most diverse lacustrine species-group of the radiation to be heavily introgressed by genotypes originating from streams of the lake system, an effect that has masked the primary phylogenetic pattern of the flock. We conclude that hybridization could have acted as a key factor in the generation of the flock's spectacular diversity. To our knowledge, this is the first empirical evidence for massive reticulate evolution within a complex animal radiation.

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