scholarly journals New phiomorph rodents from the latest Eocene of Egypt, and the impact of Bayesian “clock”-based phylogenetic methods on estimates of basal hystricognath relationships and biochronology

PeerJ ◽  
2016 ◽  
Vol 4 ◽  
pp. e1717 ◽  
Author(s):  
Hesham M. Sallam ◽  
Erik R. Seiffert

The Fayum Depression of Egypt has yielded fossils of hystricognathous rodents from multiple Eocene and Oligocene horizons that range in age from ∼37 to ∼30 Ma and document several phases in the early evolution of crown Hystricognathi and one of its major subclades, Phiomorpha. Here we describe two new genera and species of basal phiomorphs,Birkamys koraiandMubhammys vadumensis, based on rostra and maxillary and mandibular remains from the terminal Eocene (∼34 Ma) Fayum Locality 41 (L-41).Birkamysis the smallest known Paleogene hystricognath, has very simple molars, and, like derived Oligocene-to-Recent phiomorphs (but unlike contemporaneous and older taxa) apparently retained dP4∕4late into life, with no evidence for P4∕4eruption or formation.Mubhammysis very similar in dental morphology toBirkamys, and also shows no evidence for P4∕4formation or eruption, but is considerably larger. Though parsimony analysis with all characters equally weighted placesBirkamysandMubhammysas sister taxa of extantThryonomysto the exclusion of much younger relatives of that genus, all other methods (standard Bayesian inference, Bayesian “tip-dating,” and parsimony analysis with scaled transitions between “fixed” and polymorphic states) place these species in more basal positions within Hystricognathi, as sister taxa of Oligocene-to-Recent phiomorphs. We also employ tip-dating as a means for estimating the ages of early hystricognath-bearing localities, many of which are not well-constrained by geological, geochronological, or biostratigraphic evidence. By simultaneously taking into account phylogeny, evolutionary rates, and uniform priors that appropriately encompass the range of possible ages for fossil localities, dating of tips in this Bayesian framework allows paleontologists to move beyond vague and assumption-laden “stage of evolution” arguments in biochronology to provide relatively rigorous age assessments of poorly-constrained faunas. This approach should become increasingly robust as estimates are combined from multiple independent analyses of distantly related clades, and is broadly applicable across the tree of life; as such it is deserving of paleontologists’ close attention. Notably, in the example provided here, hystricognathous rodents from Libya and Namibia that are controversially considered to be of middle Eocene age are instead estimated to be of late Eocene and late Oligocene age, respectively. Finally, we reconstruct the evolution of first lower molar size among Paleogene African hystricognaths using a Bayesian approach; the results of this analysis reconstruct a rapid latest Eocene dwarfing event along the lineage leading toBirkamys.

Author(s):  
Majie Fan ◽  
Kurt N. Constenius ◽  
Rachel F. Phillips ◽  
David L. Dettman

The paleotopographic history of the North American Cordilleran orogen holds the key to understanding mechanisms of orogenesis and subsequent orogenic collapse. It has been suggested that the orogenic front in western Montana (USA) and Alberta (Canada) was more than 4 km high during Late Cretaceous−early Eocene contractional deformation and during the initial phase of extension in the middle Eocene; however, the late Eocene−Oligocene topographic evolution during continued extensional collapse remains poorly constrained. Here we extend the paleotopographic record in the Kishenehn Basin in northwestern Montana and southeastern British Columbia (Canada) to the late Oligocene by studying δ18O values of fossil mollusks and cement and paleosol carbonates. The molluscan taxa changed from three sympatric groups with preferred habitats ranging from tropical wet, semi-arid subtropical, and temperate during the middle and late Eocene, to mainly a single group associated with temperate environment during the Oligocene, reflecting a decline in molluscan biodiversity induced by climate cooling across the Eocene−Oligocene transition. Reconstructed δ18O values of alpine snowmelt and basinal precipitation decreased by 1.4‰ and 3.8‰, respectively, from the middle to late Eocene, reflecting climate cooling and ∼1 km surface uplift of the basin floor. The reconstructed alpine snowmelt δ18O values then increased by 2.9‰ in the Oligocene suggesting a ∼0.5 km drop in elevation of the orogenic front. Collectively, the results of our new and previously published δ18O data chronicle the paleotopographic response to the change from flat-slab subduction to slab rollback over a 45 m.y. period. These data suggest that the orogenic front was characterized by high elevation (>4 km) in the ancestral Lewis-Clark-Livingston ranges during latest Cretaceous−early Eocene (ca. 75−52 Ma) contraction. The initial phase of extension related to the Kishenehn Basin created a lowland basin with a surface elevation of only ∼1.5 km during the early middle Eocene (ca. 46−44 Ma) whereas the ranges remained >4 km high. The high range elevations were sustained for at least 12 m.y. in the middle to late Eocene concurrent with extension, while the basin floor elevation was uplifted to ∼2.5 km by the latest Eocene (ca. 36−34 Ma). Basin aggradation can explain at most half of the 1 km basin floor uplift. The remaining amount (at least 0.5 km) and sustained high range elevation suggest that range denudation and crustal extension was compensated by the isostatic and thermal effects of slab rollback and/or passage of a slab window and infusion of hot asthenosphere beneath the continent. The range elevation in the orogenic front decreased ∼0.5 km by the late Oligocene (ca. 28 Ma), associated with a decrease in rock uplift rate associated with extension. A post-Oligocene elevation drop of ∼1 km resulted in both the ranges and basin floor reaching modern topography in the Kishenehn Basin drainage, likely due to the regional effect of Neogene Basin and Range extension. This study, along with the previous investigation of the Kishenehn Basin by Fan et al. (2017), are the first studies that systematically investigate paleorelief of the orogenic belt by reconstructing paleoelevations of the mountains and the basin at the same time. The results highlight that the Cordilleran orogenic front of northern Montana and southern British Columbia sustained its high elevation edifice for at least 12 m.y. after the start of extension. We suggest that initial crustal extension did not result in orogenic demise because of concurrent thermal and isostatic uplift.


PeerJ ◽  
2016 ◽  
Vol 4 ◽  
pp. e2639 ◽  
Author(s):  
Matthew R. Borths ◽  
Patricia A. Holroyd ◽  
Erik R. Seiffert

Hyaenodonta is a diverse, extinct group of carnivorous mammals that included weasel- to rhinoceros-sized species. The oldest-known hyaenodont fossils are from the middle Paleocene of North Africa and the antiquity of the group in Afro-Arabia led to the hypothesis that it originated there and dispersed to Asia, Europe, and North America. Here we describe two new hyaenodont species based on the oldest hyaenodont cranial specimens known from Afro-Arabia. The material was collected from the latest Eocene Locality 41 (L-41, ∼34 Ma) in the Fayum Depression, Egypt.Akhnatenavus nefertiticyonsp. nov. has specialized, hypercarnivorous molars and an elongate cranial vault. InA. nefertiticyonthe tallest, piercing cusp on M1–M2is the paracone.Brychotherium ephalmosgen. et sp. nov. has more generalized molars that retain the metacone and complex talonids. InB. ephalmosthe tallest, piercing cusp on M1–M2is the metacone. We incorporate this new material into a series of phylogenetic analyses using a character-taxon matrix that includes novel dental, cranial, and postcranial characters, and samples extensively from the global record of the group. The phylogenetic analysis includes the first application of Bayesian methods to hyaenodont relationships.B. ephalmosis consistently placed within Teratodontinae, an Afro-Arabian clade with several generalist and hypercarnivorous forms, andAkhnatenavusis consistently recovered in Hyainailourinae as part of an Afro-Arabian radiation. The phylogenetic results suggest that hypercarnivory evolved independently three times within Hyaenodonta: in Teratodontinae, in Hyainailourinae, and in Hyaenodontinae. Teratodontines are consistently placed in a close relationship with Hyainailouridae (Hyainailourinae + Apterodontinae) to the exclusion of “proviverrines,” hyaenodontines, and several North American clades, and we propose that the superfamily Hyainailouroidea be used to describe this relationship. Using the topologies recovered from each phylogenetic method, we reconstructed the biogeographic history of Hyaenodonta using parsimony optimization (PO), likelihood optimization (LO), and Bayesian Binary Markov chain Monte Carlo (MCMC) to examine support for the Afro-Arabian origin of Hyaenodonta. Across all analyses, we found that Hyaenodonta most likely originated in Europe, rather than Afro-Arabia. The clade is estimated by tip-dating analysis to have undergone a rapid radiation in the Late Cretaceous and Paleocene; a radiation currently not documented by fossil evidence. During the Paleocene, lineages are reconstructed as dispersing to Asia, Afro-Arabia, and North America. The place of origin of Hyainailouroidea is likely Afro-Arabia according to the Bayesian topologies but it is ambiguous using parsimony. All topologies support the constituent clades–Hyainailourinae, Apterodontinae, and Teratodontinae–as Afro-Arabian and tip-dating estimates that each clade is established in Afro-Arabia by the middle Eocene.


2008 ◽  
Vol 27 (1) ◽  
pp. 75-94 ◽  
Author(s):  
G. R. Guerstein ◽  
M. V. Guler ◽  
G. L. Williams ◽  
R. A. Fensome ◽  
J. O. Chiesa

Abstract. Palynological data from four surface sections in northern Tierra del Fuego, southern Argentina, provide a biostratigraphical and palaeoenvironmental framework for the lower member of the La Despedida Formation and the Cabo Peña Formation in their type areas. Selected dinoflagellate cyst (dinocyst) events indicate that the age of the lower member of the La Despedida Formation is Middle Eocene and that of the Cabo Peña Formation is Late Eocene–earliest Oligocene. The age assigned to the La Despedida Formation agrees with determinations based on calcareous microfossils, but there is a potential discrepancy regarding the Cabo Peña Formation. According to recent stratigraphic studies, the Cabo Domingo Group, which includes the Cabo Peña Formation, is Late Eocene–Miocene in age. The palynomorph assemblages from the lower member of the La Despedida Formation contain the endemic ‘Transantarctic Flora’, which reflects marginal marine conditions. The maximum abundance of Enneadocysta spp. reflects more open-sea conditions and a warming event during the late Middle Eocene. The lower part of the Cabo Peña Formation has a high ratio of dinocysts to sporomorphs and an abundance of Nematosphaeropsis lemniscata, Reticulatosphaera actinocoronata and Impagidinium spp., suggesting an oceanic to outer neritic environment. Abundant Gelatia inflata and protoperidiniacean cysts indicate cool surface waters rich in dissolved nutrients. These cold-water markers may reflect the development of the Antarctic Circumpolar Current, an important event in the transition from a greenhouse to an icehouse climate mode. Toward the top of the sections, the lower ratios of dinocysts to sporomorphs, as well as the composition of the dinocyst assemblages, reflect a neritic rather than an oceanic setting. This palynological change may be due to eustatic sea-level lowering caused by cooling during the latest Eocene–earliest Oligocene. A new species, Spiniferites scalenus, is described and the new combination Lingulodinium echinatum proposed; an emendation for the latter species is also proposed.


1994 ◽  
Vol 31 (5) ◽  
pp. 865-880 ◽  
Author(s):  
D. G. F. Long ◽  
A. R. Sweet

Poorly exposed Late Eocene strata in the Rock River basin, 115 km northeast of Watson Lake, accumulated in an intermontane valley with a geometry and history controlled by subsidence associated with the Rock River Fault. The sequence, as seen in one outcrop and five borehole sections, is dominated by drab mudrocks with minor sandstones and some thick lenses of coal. The mudrocks accumulated in floodplain marsh and pond settings associated with a low-gradient, possibly anastomosed, fluvial system. River banks were stable owing to the abundance of plant roots in the channel walls. Although channel sandstone and conglomerate were not identified in the core, the abundance of coarsening- and fining-upwards sets of sandstone of splay origin indicates pronounced levee development. Woody coals accumulated in areas well away from the main channel, in a series of elongate forested swamps, which were periodically inundated by flood water.The overall palynological assemblage is typical of the Eocene and Early Oligocene. A Late Eocene age is inferred from the presence of Gothanipollis in combination with the absence of index species for the Early–Middle Eocene and the latest? Eocene and Oligocene. The low miospore diversity indicates a temperate climate. The dominance of the palynological assemblage by Taxodiaceae–Cupressaceae pollen indicates wet–humid conditions.


Paleobiology ◽  
1985 ◽  
Vol 11 (4) ◽  
pp. 389-405 ◽  
Author(s):  
Donald R. Prothero

Diversity and faunal turnover of North American land mammals are calibrated against the magnetic polarity time scale for million-year intervals for the latest Eocene through late Oligocene. A major, gradual Late Eocene decline in diversity, caused mostly by an extended period of extinction of archaic forms, seems to be related to the worldwide crisis known as the “Terminal Eocene Event.” Along with other evidence of gradual changes in deep-sea microfossils, this evidence argues against a catastrophic explanation for late Eocene extinctions.Faunal stability characterized the rest of the Oligocene except for a wave of extinctions in the mid-Oligocene (Chadronian-Orellan boundary, about 32.4 ma). This mid-Oligocene event is sudden and severe, occurring in less than 200,000 yr, based on estimates from sedimentation rates calibrated from magnetic polarity interval boundaries. The mid-Oligocene event is found in many paleoclimatic records, but not in all of them. It may be related to the completion of the Circum-Antarctic Current and to increased mid-Oligocene glaciation.


2012 ◽  
Vol 63 (5) ◽  
pp. 407-424 ◽  
Author(s):  
Marta Oszczypko-Clowes

Abstract Studies, based on calcareous nannofossils, proved that the level of reworked microfossils had so far been underestimated. More recently detailed quantitative studies of calcareous nannoplankton of the Magura, Malcov, Zawada and Kremna formations from the Magura Nappe in Poland documented a degree of nannofossil recycling among those formations. In the Late Eocene-Early Oligocene pelagic Leluchów Marl Member of the Malcov Formation the level of redeposition is very low (0-3.80 %), however, in the flysch deposits of the Malcov Formation reworking increased to 31.4 %. Late Oligocene through Early Miocene “molasse” type deposits of the Zawada and Kremna formations contain 43.7-69.0 % of reworked nannofossils. Quantitative analyses of the reworked assemblages confirmed the domination of Paleogene nannofossil species over Cretaceous ones. The most abundant, reworked assemblages belong to the Early- Middle Eocene age.


Author(s):  
Alan Graham

During the Middle Eocene through the Early Miocene, erosion of the Appalachian Mountains exceeded uplift and there was a net reduction in elevation. In the Rocky Mountains uplift continued through the Middle Eocene (end of the Laramide orogeny), waned in the Middle Tertiary, and then increased beginning at about 10 Ma. Earlier reconstructions placed paleoelevations in the Rocky Mountains during the Middle Eocene through the Early Miocene at approximately half the present relief. The maximum elevation in the Front Ranges during the latest Eocene was estimated at ~2500 m (~8000 ft; MacGinitie, 1953). Recent approximations are for nearly modern elevations in several areas by the Eocene-Oligocene. Extensive Eocene volcanism deposited ash and blocked drainage systems, augmenting uplift and facilitating the preservation of extensive fossil floras and faunas. In the far west the beginning of Tertiary volcanism in the Sierra Nevada is dated at ~ 33 Ma near the Eocene-Oligocene boundary. A drying trend becomes evident in the Middle Eocene and reduced moisture, along with the waning of volcanic activity in the Oligocene, restricted conditions favorable to fossilization. The number of Oligocene floras in the northern Rocky Mountains is considerably fewer than in younger deposits to the west. In the absence of extensive plate reorganization and orogeny, CO2 concentration decreased, which contributed to a temperature decline that continued through the Cenozoic and intensified in the Late Tertiary. Recall from Chapter 2 (sections on orogeny and volcanism) that uplift plays a role in determining long-term climate by creating rainshadows, altering atmospheric circulation patterns, and increasing the erosion of silicate rocks that causes a drawdown of CO2. This allows heat to escape from the troposphere and results in lower temperatures. Marine benthic temperatures were ~10°C in the early Late Eocene and ~2°C near the Eocene-Oligocene boundary, assuming an essentially ice-free Earth during that time, and increased to ~5-6°Cnear the end of the Early Miocene. Temperatures over land in the midnorthern latitudes are estimated to have dropped by ~12°C between the Late Eocene and Early Oligocene (Wolfe, 1992a).


2012 ◽  
Vol 63 (2) ◽  
pp. 149-164 ◽  
Author(s):  
Marta Oszczypko-Clowes ◽  
Bartłomiej Żydek

Paleoecology of the Upper Eocene-Lower Oligocene Malcov Basin based on the calcareous nannofossils: a case study of the Leluchów section (Krynica Zone, Magura Nappe, Polish Outer Carpathians)During the period of ca. 20 Ma (Middle Eocene-Chattian) the Leluchów Succession of the Magura Basin passed through drastic changes of sedimentary condition and paleobathymetry from well oxygened red shales withReticulofragmium amplectens, deposited beneath CCD, redGlobigerinaoozes, to oxygen depleted organic-rich menilite-type shales and finally to flysch deposition of open marine conditions. The biostratigraphic and lithostratigraphic scheme is well established with the Leluchów Marl Member — Zones NP19-20 to NP22 (Late Eocene-Early Oligocene), Smereczek Shale Member, Zone NP23 (Early Oligocene) and the Malcov Formation s.s., Zone NP24 (Early-Late Oligocene). The aim of the paper is to present the quantitative analyses as the basis for paleoecological changes in the Magura Basin during the Late Eocene-Late Oligocene period. The changes manifest themselves through a decrease in the water temperature and progressing eutrophication. Species typical of brackish water conditions and restricted to the Paratethys region were identified from the NP23 Zone.


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