scholarly journals The biosonar of the boto: evidence of differences among species of river dolphins (Inia spp.) from the Amazon

PeerJ ◽  
2021 ◽  
Vol 9 ◽  
pp. e11105
Author(s):  
Jéssica F. Melo ◽  
Thiago O. S. Amorim ◽  
Mariana Paschoalini ◽  
Artur Andriolo
Keyword(s):  
Amazon Basin ◽  
Conservation Status ◽  
River System ◽  
Peak Frequency ◽  
Acoustical Parameters ◽  
Araguaia River ◽  
The Family ◽  
Madeira River ◽  
Inia Geoffrensis ◽  
Species Specific

Echolocation clicks can reflect the anatomy of the vocalizing animal, enabling the distinction of species. River dolphins from the family Iniidae are formally represented by one species and two subspecies (Inia geoffrensis geoffrensis and I. g. humboldtiana). Additionally, two other species have been proposed (I. boliviensis and I. araguaiaensis) regarding its level of restricted distribution and morph-genetics differences. For the Committee on Taxonomy of the Society for Marine Mammalogy, the specific status of the proposed species relies on further knowledge on morphology, ecology, and genetics. Given that species-specific status is required for conservation efforts, we described and compared the echolocation clicks of Inia spp., searching for specific differences on their vocalizations. The sounds were captured with a Cetacean Research ™ C54XRS (+3/−20 dB, −185 dB re: 1V/μPa) in Guaviare River (Orinoco basin), Madeira River (Madeira basin), Xingu River (Amazon Basin), and Araguaia River (Tocantins-Araguaia basin). We found significant differences in all analyzed parameters (peak frequency, 3 dB bandwidth, 10 dB bandwidth and inter-click interval) for all species and subspecies. Differences in acoustical parameters of clicks are mainly related to the animal’s internal morphology, thus this study may potentially support with information for the species-level classification mostly of I. araguaiaensis (the Araguaian boto). Classifying the Araguaian boto separately from I. geoffrensis has important implications for the species in terms of conservation status, since it is restricted to a highly impacted river system.

scholarly journals A new species of Xyliphius, a rarely sampled banjo catfish (Siluriformes: Aspredinidae) from the rio Tocantins-Araguaia system

2010 ◽  
Vol 8 (1) ◽  
pp. 105-112 ◽  
Author(s):  
Carlos A Figueiredo ◽  
Marcelo R Britto
Keyword(s):  
New Species ◽  
Conservation Status ◽  
River System ◽  
Character State ◽  
New Taxon ◽  
Posterior Border ◽  
Lower Lip ◽  
Araguaia River ◽  
State Variation ◽  
A New Species

Xyliphius anachoretes, a new species of aspredinid catfish is described from the Tocantins-Araguaia River system. Xyliphius anachoretes is diagnosed by the presence of six developed retrorse serrae on posterior border of pectoral-fin spine, presence of papillae on the lower lip bearing minute branches, and only two dorsal procurrent rays. Comments about the informativeness of character-state variation among Xyliphius species and aspredinid related genera are furnished. Also, a brief discussion about conservation status of the new taxon is made.

A new species of driftwood catfish Centromochlus Kner, 1858 (Siluriformes, Auchenipteridae, Centromochlinae) from Tocantins-Araguaia River drainage

Zootaxa ◽  
2021 ◽  
Vol 4950 (1) ◽  
pp. 149-165
Author(s):  
FERNANDA L. COELHO ◽  
CARINE C. CHAMON ◽  
LUISA M. SARMENTO-SOARES
Keyword(s):  
New Species ◽  
Conservation Status ◽  
River System ◽  
Ventral Surface ◽  
Color Pattern ◽  
Pectoral Fin ◽  
River Drainage ◽  
Orinoco River ◽  
Araguaia River ◽  
A New Species

The genus Centromochlus includes eight catfish species in the Amazon and Orinoco river systems: C. schultzi from Xingu and Tocantins-Araguaia rivers; C. melanoleucus from Tapajós and Teles Pires rivers; C. macracanthus from Negro River; C. orca from Nhamundá River; C. heckelii and C. existimatus from Amazon and additionally at the Essequibo rivers; C. carolae and C. musaica from Orinoco River system. Recent field expeditions and collection examination revealed an undescribed species of Centromochlinae that has compatible features with Centromochlus. We herein describe a new species of Centromochlus from the Tocantins-Araguaia River drainage, diagnosed among most Centromochlinae by having a vermiculated color pattern on the dorsum and included in Centromochlus by sharing the derived features: ventrolateral position of eye socket; sphenotic notched for the exit of infraorbital canal; and posterior serrations along pectoral-fin spine numerous. The new species is diagnosed from congeners by having the pectoral-fin spine with dark bars, alternating with light bars (vs. pectoral-fin spine with light and uniform color in all Centromochlus); and it is further distinguished from its congeners (except C. carolae) by the ventral surface of head moderate to largely pigmented (vs. ventral surface of head unpigmented in C. heckelii, C. existimatus, C. orca, C. musaicus, C. schultzi, with few scattered dark chromatophores in C. macracanthus and C. melanoleucus; see diagnosis). A discussion about the systematics of the genus, plus the conservation status of the new species, and an identification key to species of Centromochlus, are also provided. 

First records of bats (Mammalia: Chiroptera) from Muong Phang cultural and historical site, Dien Bien province, Northwestern Vietnam

2017 ◽  
Vol 39 (3) ◽  
pp. 296-302
Author(s):  
Dao Nhan Loi ◽  
Vu Dinh Thong
Keyword(s):  
Conservation Status ◽  
Forest Area ◽  
Sound Recordings ◽  
The Public ◽  
The Family ◽  
Biological Taxa

The internationally renowned Muong Phang Cultural and Historical Site is located in the Dien Bien Phu region, northwestern Vietnam, and has received special attention from the public because of its great biodiversity. This site has a large forest area and other habitats including lakes, streams, rivers and paddyfield. These habitats would be ideal homes for bats and other biological taxa. However, in general, the wildlife of the Muong Phang Cultural and Historical Site receives little attention from scientists and authorities. Between 2014 and 2016, we conducted  series of surveys for bats in Muong Phang. Bat capture and sound recordings were the main procedure to obtain materials and data necessary for the assessment of diversity and conservation status. The results of the surveys this time revealed that there are 19 species of bats belonging to 7 genera, 5 families in the study area. Of these, a Myotis sp. is different from all the previously recorded Myotis bats from Vietnam, and, a Rhinolophus sp. is different from every described species of the family Rhinolophidae. This paper provides the first records of bats from Muong Phang with remarks on their taxonomy and conservation status.   Citation: Dao Nhan Loi, Vu Dinh Thong, 2017. First records of bats (Mammalia: Chiroptera) from Muong Phang cultural and historical site, Dien Bien province, Northwestern Vietnam. Tap chi Sinh hoc, 39(3): 296-302. DOI: 10.15625/0866-7160/v39n3.10641. *Corresponding author: [email protected]. Received 29 August 2017, accepted 10 September 2017 

Species-diagnostic and species-specific DNA sequences evenly distributed throughout pine and spruce chromosomes

Genome ◽  
2010 ◽  
Vol 53 (10) ◽  
pp. 769-777 ◽  
Author(s):  
Melanie Mehes-Smith ◽  
Paul Michael ◽  
Kabwe Nkongolo
Keyword(s):  
Dna Sequences ◽  
Random Amplified Polymorphic Dna ◽  
Inter Simple Sequence Repeat ◽  
Issr Markers ◽  
Pinus Monticola ◽  
The Family ◽  
Species Specific ◽  
Rapd And Issr ◽  
Specific Sequences

Genome organization in the family Pinaceae is complex and largely unknown. The main purpose of the present study was to develop and physically map species-diagnostic and species-specific molecular markers in pine and spruce. Five RAPD (random amplified polymorphic DNA) and one ISSR (inter-simple sequence repeat) species-diagnostic or species-specific markers for Picea mariana , Picea rubens , Pinus strobus , or Pinus monticola were identified, cloned, and sequenced. In situ hybridization of these sequences to spruce and pine chromosomes showed the sequences to be present in high copy number and evenly distributed throughout the genome. The analysis of centromeric and telomeric regions revealed the absence of significant clustering of species-diagnostic and species-specific sequences in all the chromosomes of the four species studied. Both RAPD and ISSR markers showed similar patterns.

Comparative Cytogenetics in Four Leptodactylus Species (Amphibia, Anura, Leptodactylidae): Evidence of Inner Chromosomal Diversification in Highly Conserved Karyotypes

2021 ◽  
pp. 1-11
Author(s):  
David S. da Silva ◽  
Heriberto F. da Silva Filho ◽  
Marcelo B. Cioffi ◽  
Edivaldo H.C. de Oliveira ◽  
Anderson J.B. Gomes
Keyword(s):  
18S Rdna ◽  
Repetitive Sequences ◽  
Molecular Cytogenetics ◽  
Comparative Cytogenetics ◽  
The Family ◽  
Agnor Staining ◽  
Dna Elements ◽  
Conventional Cytogenetics ◽  
Species Specific ◽  
Repetitive Dna Elements

With 82 species currently described, the genus <i>Leptodactylus</i> is the most diverse and representative one in the family Leptodactylidae. Concerning chromosomal organization, this genus represents an interesting and underexplored group since data from molecular cytogenetics are incipient, and little is known about the organization and distribution of repetitive DNA elements in the karyotypes. In this sense, this study aimed at providing a comparative analysis in 4 <i>Leptodactylus</i> species (<i>L. macrosternum, L. pentadactylus, L. fuscus,</i> and <i>Leptodactylus</i> cf<i>. podicipinus</i>), combining conventional cytogenetics (Giemsa staining, C-banding, and AgNOR staining) and mapping of molecular markers (18S rDNA, telomeric and microsatellite probes), to investigate mechanisms underlying their karyotype differentiation process. The results showed that all species had karyotypes with 2n = 22 and FN = 44, except for <i>Leptodactylus</i> cf. <i>podicipinus</i> which presented FN = 36. The 18S rDNA was observed in pair 8 of all analyzed species (corresponding to pair 4 in <i>L. pentadactylus</i>), coinciding with the secondary constrictions and AgNOR staining. FISH with microsatellite DNA probes demonstrated species-specific patterns, as well as an association of these repetitive sequences with constitutive heterochromatin blocks and ribosomal DNA clusters, revealing the dynamics of microsatellites in the genome of the analyzed species. In summary, our data demonstrate an ongoing process of genomic divergence inside species with almost similar karyotype, driven most likely by a series of pericentric inversions, followed by differential accumulation of repetitive sequences.

scholarly journals Trade and the conservation status of the family Psittacidae in Venezuela

1991 ◽  
Vol 1 (2) ◽  
pp. 153-169 ◽  
Author(s):  
Philip Desenne ◽  
Stuart D. Strahl
Keyword(s):  
Conservation Status ◽  
Field Studies ◽  
Remedial Action ◽  
Trade Data ◽  
Orinoco Delta ◽  
The Family ◽  
Priority Order ◽  
Key Sites ◽  
Educational Campaigns ◽  
National Trade

SummaryAn assessment of trade in parrots throughout Venezuela, 1988–1989, reveals alarmingly high internal and international levels. The national trade has main outlets in major cities, but is now compounded by the use of feathers for Indian artifacts sold to tourists. International trade involves illegal export chiefly from the Orinoco Delta, the majority of such birds (65,000–75,000) destined for Guyana. The large macaws suffer badly from both types of trade, but owing to its restricted range the endemic Amazona barbadensis is perhaps the most critically threatened species. Other species are assessed and, along with key sites, identified in priority order for remedial action, which should include more detailed field studies, rigorous trade data analysis, exchange of trade data with major neighbours, census and monitoring technique improvements, educational campaigns, and strict breeding facility control.

scholarly journals The role of chromosomal fusion in the karyotypic evolution of the genus Ageneiosus (Siluriformes: Auchenipteridae)

2013 ◽  
Vol 11 (2) ◽  
pp. 327-334 ◽  
Author(s):  
Roberto Laridondo Lui ◽  
Daniel Rodrigues Blanco ◽  
Juliana de Fatima Martinez ◽  
Vladimir Pavan Margarido ◽  
Paulo Cesar Venere ◽  
...  
Keyword(s):  
Chromosome Pair ◽  
5S Rdna ◽  
Proximal Region ◽  
Terminal Region ◽  
Metacentric Chromosome ◽  
South American ◽  
Submetacentric Chromosome ◽  
Araguaia River ◽  
The Family ◽  
Preferential Location

Ageneiosus is the most widely distributed genus of the family Auchenipteridae among South American river basins. Although chromosome studies in the family are scarce, this genus has the largest number of analyzed species, with 2n = 54 to 56 chromosomes, differing from the rest of the family (2n = 58). This study aimed to analyze Ageneiosus inermis from the Araguaia River basin. The diploid number found was of 56 chromosomes. Heterochromatin was allocated in terminal region of most chromosomes, plus a pericentromeric heterochromatic block in pair 1, a pair distinguished by size in relation to other chromosomes pairs. AgNORs were detected in only one submetacentric chromosome pair, which was confirmed by FISH. 5S rDNA was present in only one metacentric chromosome pair. Hybridization with [TTAGGG]n sequence marked the telomeres of all chromosomes, in addition to an ITS in the proximal region of the short arm of pair 1. The repetitive [GATA]n sequence was dispersed, with preferential location in terminal region of the chromosomes. Ageneiosus has a genomic organization somewhat different when compared to other Auchenipteridae species. Evidences indicate that a chromosomal fusion originated the first metacentric chromosome pair in A. inermis, rearrangement which may be a basal event for the genus

scholarly journals ORCHILEAK (revision 3875): a new model branch to simulate carbon transfers along the terrestrial–aquatic continuum of the Amazon basin

2017 ◽  
Vol 10 (10) ◽  
pp. 3821-3859 ◽  
Author(s):  
Ronny Lauerwald ◽  
Pierre Regnier ◽  
Marta Camino-Serrano ◽  
Bertrand Guenet ◽  
Matthieu Guimberteau ◽  
...  
Keyword(s):  
Land Surface ◽  
Water Surface ◽  
Amazon Basin ◽  
River System ◽  
Terrestrial Ecosystems ◽  
Plant Litter ◽  
Mean Values ◽  
New Model ◽  
Canopy Soil ◽  
C Cycle

Abstract. Lateral transfer of carbon (C) from terrestrial ecosystems into the inland water network is an important component of the global C cycle, which sustains a large aquatic CO2 evasion flux fuelled by the decomposition of allochthonous C inputs. Globally, estimates of the total C exports through the terrestrial–aquatic interface range from 1.5 to 2.7 Pg C yr−1 (Cole et al., 2007; Battin et al., 2009; Tranvik et al., 2009), i.e. of the order of 2–5 % of the terrestrial NPP. Earth system models (ESMs) of the climate system ignore these lateral transfers of C, and thus likely overestimate the terrestrial C sink. In this study, we present the implementation of fluvial transport of dissolved organic carbon (DOC) and CO2 into ORCHIDEE (Organising Carbon and Hydrology in Dynamic Ecosystems), the land surface scheme of the Institut Pierre-Simon Laplace ESM. This new model branch, called ORCHILEAK, represents DOC production from canopy and soils, DOC and CO2 leaching from soils to streams, DOC decomposition, and CO2 evasion to the atmosphere during its lateral transport in rivers, as well as exchange with the soil carbon and litter stocks on floodplains and in swamps. We parameterized and validated ORCHILEAK for the Amazon basin, the world's largest river system with regard to discharge and one of the most productive ecosystems in the world. With ORCHILEAK, we are able to reproduce observed terrestrial and aquatic fluxes of DOC and CO2 in the Amazon basin, both in terms of mean values and seasonality. In addition, we are able to resolve the spatio-temporal variability in C fluxes along the canopy–soil–water continuum at high resolution (1°, daily) and to quantify the different terrestrial contributions to the aquatic C fluxes. We simulate that more than two-thirds of the Amazon's fluvial DOC export are contributed by the decomposition of submerged litter. Throughfall DOC fluxes from canopy to ground are about as high as the total DOC inputs to inland waters. The latter, however, are mainly sustained by litter decomposition. Decomposition of DOC and submerged plant litter contributes slightly more than half of the CO2 evasion from the water surface, while the remainder is contributed by soil respiration. Total CO2 evasion from the water surface equals about 5 % of the terrestrial NPP. Our results highlight that ORCHILEAK is well suited to simulate carbon transfers along the terrestrial–aquatic continuum of tropical forests. It also opens the perspective that provided parameterization, calibration and validation is performed for other biomes, the new model branch could improve the quantification of the global terrestrial C sink and help better constrain carbon cycle–climate feedbacks in future projections.

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