An Efficient Approach to Mining Maximal Contiguous Frequent Patterns from Large DNA Sequence Databases

Md. Rezaul Karim; Md. Mamunur Rashid; Byeong-Soo Jeong; Ho-Jin Choi

doi:10.5808/gi.2012.10.1.51

An Efficient Approach to Mining Maximal Contiguous Frequent Patterns from Large DNA Sequence Databases

Genomics & Informatics ◽

10.5808/gi.2012.10.1.51 ◽

2012 ◽

Vol 10 (1) ◽

pp. 51 ◽

Cited By ~ 4

Author(s):

Md. Rezaul Karim ◽

Md. Mamunur Rashid ◽

Byeong-Soo Jeong ◽

Ho-Jin Choi

Keyword(s):

Dna Sequence ◽

Frequent Patterns ◽

Efficient Approach ◽

Sequence Databases

Download Full-text

Back translated peptide K-mer search and local alignment in large DNA sequence databases using BoND-SD-tree indexing

2015 IEEE 15th International Conference on Bioinformatics and Bioengineering (BIBE) ◽

10.1109/bibe.2015.7367638 ◽

2015 ◽

Cited By ~ 2

Author(s):

A K M Tauhidul Islam ◽

Sakti Pramanik ◽

Xinge Ji ◽

James R. Cole ◽

Qiang Zhu

Keyword(s):

Dna Sequence ◽

Local Alignment ◽

Sequence Databases

Download Full-text

Condon usage tabulated from the international DNA sequence databases

Nucleic Acids Research ◽

10.1093/nar/24.1.214 ◽

1996 ◽

Vol 24 (1) ◽

pp. 214-215 ◽

Cited By ~ 40

Author(s):

Y Nakamura

Keyword(s):

Dna Sequence ◽

Sequence Databases

Download Full-text

An efficient approach for outlier detection from uncertain data streams based on maximal frequent patterns

Expert Systems with Applications ◽

10.1016/j.eswa.2020.113646 ◽

2020 ◽

Vol 160 ◽

pp. 113646

Author(s):

Saihua Cai ◽

Li Li ◽

Sicong Li ◽

Ruizhi Sun ◽

Gang Yuan

Keyword(s):

Outlier Detection ◽

Data Streams ◽

Uncertain Data ◽

Frequent Patterns ◽

Efficient Approach ◽

Uncertain Data Streams

Download Full-text

Searching Pattern in DNA Sequence Using ECC-Diffie-Hellman Exchange Based Hash Function: An Efficient Approach

10.1007/978-3-030-82469-3_11 ◽

2021 ◽

pp. 117-127

Author(s):

M. Ravikumar ◽

M. C. Prashanth ◽

B. J. Shivaprasad

Keyword(s):

Dna Sequence ◽

Hash Function ◽

Efficient Approach ◽

Diffie Hellman

Download Full-text

Using the FASTA Program to Search Protein and DNA Sequence Databases

Computer Analysis of Sequence Data ◽

10.1385/0-89603-276-0:365 ◽

1994 ◽

pp. 365-389 ◽

Cited By ~ 3

Author(s):

William R. Pearson

Keyword(s):

Dna Sequence ◽

Sequence Databases

Download Full-text

Frequent Patterns Mining in DNA Sequence

IEEE Access ◽

10.1109/access.2019.2933044 ◽

2019 ◽

Vol 7 ◽

pp. 108400-108410 ◽

Cited By ~ 5

Author(s):

Na Deng ◽

Xu Chen ◽

Desheng Li ◽

Caiquan Xiong

Keyword(s):

Dna Sequence ◽

Frequent Patterns

Download Full-text

An efficient approach for updating the structure for mining frequent patterns

2012 IEEE International Conference on Industrial Engineering and Engineering Management ◽

10.1109/ieem.2012.6837866 ◽

2012 ◽

Author(s):

Show-Jane Yen ◽

Yue-Shi Lee ◽

Jia-Yuan Gu

Keyword(s):

Frequent Patterns ◽

Efficient Approach

Download Full-text

The ed-tree: an index for large DNA sequence databases

15th International Conference on Scientific and Statistical Database Management, 2003. ◽

10.1109/ssdm.2003.1214976 ◽

2004 ◽

Cited By ~ 1

Author(s):

Zhenqiang Tan ◽

Xia Cao ◽

Beng Chin Ooi ◽

A.K.H. Tung

Keyword(s):

Dna Sequence ◽

Sequence Databases

Download Full-text

An Efficient Approach for Mining Frequent Patterns Based on Traversing a Frequent Pattern Tree

2008 International Conference on Computer Science and Software Engineering ◽

10.1109/csse.2008.801 ◽

2008 ◽

Cited By ~ 1

Author(s):

Show-Jane Yen ◽

Yue-Shi Lee ◽

Chiu-Kuang Wang ◽

Jung-Wei Wu

Keyword(s):

Frequent Pattern ◽

Frequent Patterns ◽

Efficient Approach ◽

Frequent Pattern Tree

Download Full-text

Fast and Efficient Hashing for Sequence Similarity Search using Substring Extraction in DNA Sequence Databases

International Journal of Computer Applications ◽

10.5120/13516-1295 ◽

2013 ◽

Vol 78 (9) ◽

pp. 13-17

Author(s):

Robinson Silvester.A ◽

J. Cruz Antony ◽

M. Pratheepa

Keyword(s):

Dna Sequence ◽

Similarity Search ◽

Sequence Similarity ◽

Sequence Similarity Search ◽

Sequence Databases

Download Full-text