scholarly journals Spectroscopy, Substituent Effects, and Reaction Mechanisms

2018 ◽  
Author(s):  
Burkhard Kirste
Keyword(s):  
Reaction Mechanisms ◽  
Substituent Effects

SOLVENT AND SUBSTITUENT EFFECTS ON THE INTRAMOLECULAR AMIDE HYDROLYSIS OF N-METHYLMALEAMIC ACID

2009 ◽  
Vol 08 (06) ◽  
pp. 1217-1226 ◽  
Author(s):  
JUN CAI ◽  
ZHIJIAN WU
Keyword(s):  
Reaction Mechanism ◽  
Gas Phase ◽  
Reaction Mechanisms ◽  
Substituent Effects ◽  
Phase Reaction ◽  
Gas Phase Reaction ◽  
Amide Hydrolysis ◽  
Reaction Barriers ◽  
Hydrolysis Of ◽  
Concerted Reaction

Intramolecular amide hydrolysis of N-methylmaleamic acid is revisited at the B3LYP/6-311G(2df, p)//B3LYP/6-31G(d, p) + ZVPE level, including solvent effects at the CPCM-B3LYP/6-311G(2df, p)//Onsager-B3LYP/6-31G(d, p) + ZPVE level. The concerted reaction mechanism is energetically favorable over stepwise reaction mechanisms in both the gas phase and solution. The calculated reaction barriers are significantly lower in solution than in the gas phase. In addition, it is concluded that the substituents of the four N-methylmaleamic acid derivatives considered herein have a significant effect on the gas-phase reaction barriers but a smaller, or little, effect on the barriers in solution.

Kinetics and mechanism of the formation of N-vinyl pyridinium cations in elimination reactions in aqueous base

1992 ◽  
Vol 70 (4) ◽  
pp. 1195-1203 ◽  
Author(s):  
John W. Bunting ◽  
Andrea Toth ◽  
James P. Kanter
Keyword(s):  
Reaction Mechanisms ◽  
Substituent Effects ◽  
Hydroxide Ion ◽  
First Order ◽  
Pyridinium Cation ◽  
Rate Determining Step ◽  
Bromide Ion ◽  
Aqueous Base ◽  
Elimination Reactions ◽  
Pyridinium Cations

The rates of the elimination reactions of N-(2-bromoethyl) pyridinium cations (1) and N,N′-ethylene bispyridinium dications (3) to give the corresponding N-vinyl pyridinium cations (2) have been measured spectrophotometrically in basic aqueous solutions (ionic strength 0.1, 25 °C) for a variety of substituents in the pyridine rings of each of these classes of pyridinium cation. The reaction kinetics are first order in 1 or 3 and first order in hydroxide ion. Brønsted-type plots of the second-order rate constants (kOH) as a function of the basicity (as pKBH) of the corresponding substituted pyridine are nonlinear for each of 1 and 3 and can be interpreted in terms of E1cb reaction mechanisms. For 1, the Brønsted-type plot displays two distinct "concave down" linear regions; rate-determining deprotonation for pKBH < 5.16 (slope = −0.30), and a change in rate-determining step to bromide ion departure for pKBH > 5.16 (slope −0.58). For 3, the Brønsted-type plot appears to be smoothly curved for symmetrically disubstituted bispyridinium dications, as a consequence of the multiple substituent effects upon each step of the E1cb reactions of these dications. However, log kOH for 3 is a smooth linear function of the previously reported log kOH for the E1cb reactions of N-(2-cyanoethyl) pyridinium cations over a range in which a change in rate-determining step has been directly demonstrated for these latter cations. Thus a change in rate-determining step as a function of pyridine basicity is also required within the E1cb mechanism for 3. The E1cb reactions of 1 are approximately 104-fold faster than the corresponding hydroxide ion catalyzed E2 eliminations from 2-phenylethyl bromides that are isoelectronic with 1.

Analyzing reactions of single mechanoenzyme molecules by light microscopy

1992 ◽  
Vol 50 (1) ◽  
pp. 426-427
Author(s):  
Jeff Gelles
Keyword(s):  
Image Processing ◽  
Reaction Mechanisms ◽  
Transient State ◽  
Nanometer Scale ◽  
Reaction Intermediates ◽  
Enzyme Molecule ◽  
Directed Movement ◽  
Enzyme Molecules ◽  
Individual Enzyme ◽  
Single Reaction

Mechanoenzymes are enzymes which use a chemical reaction to power directed movement along biological polymer. Such enzymes include the cytoskeletal motors (e.g., myosins, dyneins, and kinesins) as well as nucleic acid polymerases and helicases. A single catalytic turnover of a mechanoenzyme moves the enzyme molecule along the polymer a distance on the order of 10−9 m We have developed light microscope and digital image processing methods to detect and measure nanometer-scale motions driven by single mechanoenzyme molecules. These techniques enable one to monitor the occurrence of single reaction steps and to measure the lifetimes of reaction intermediates in individual enzyme molecules. This information can be used to elucidate reaction mechanisms and determine microscopic rate constants. Such an approach circumvents difficulties encountered in the use of traditional transient-state kinetics techniques to examine mechanoenzyme reaction mechanisms.

X-Ray Microanalysis of Nickel and Cobalt Intensified Peroxidase- Antiperoxidase For Verification of Reaction Sites

1985 ◽  
Vol 43 ◽  
pp. 468-469
Author(s):  
A. Angel ◽  
K. Miller ◽  
V. Seybold ◽  
R. Kriebel
Keyword(s):  
Reaction Mechanisms ◽  
Visual Discrimination ◽  
Osmium Tetroxide ◽  
Ultrastructural Level ◽  
Microscopic Level ◽  
Electron Microscopic Level ◽  
Electron Microscopic ◽  
X Ray ◽  
Insoluble Polymer ◽  
Cytochemical Reaction

Localization of specific substances at the ultrastructural level is dependent on the introduction of chemicals which will complex and impart an electron density at specific reaction sites. Peroxidase-antiperoxidase(PAP) methods have been successfully applied at the electron microscopic level. The PAP complex is localized by addition of its substrate, hydrogen peroxide and an electron donor, usually diaminobenzidine(DAB). On oxidation, DAB forms an insoluble polymer which is able to chelate with osmium tetroxide becoming electron dense. Since verification of reactivity is visual, discrimination of reaction product from osmiophillic structures may be difficult. Recently, x-ray microanalysis has been applied to examine cytochemical reaction precipitates, their distribution in tissues, and to study cytochemical reaction mechanisms. For example, immunoreactive sites labelled with gold have been ascertained by means of x-ray microanalysis.

Substituent effects and solvents

1992 ◽  
Vol 89 ◽  
pp. 1567-1571
Author(s):  
O Pytela ◽  
M Ludwig
Keyword(s):  
Substituent Effects
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