scholarly journals Genetic Diversity Analysis of South and East Asian Duck Populations Using Highly Polymorphic Microsatellite Markers

2016 ◽  
Vol 29 (4) ◽  
pp. 471-478 ◽  
Author(s):  
Dongwon Seo ◽  
Md. Shamsul Alam Bhuiyan ◽  
Hasina Sultana ◽  
Jung Min Heo ◽  
Jun Heon Lee
Keyword(s):  
Genetic Diversity ◽  
Microsatellite Markers ◽  
East Asian ◽  
Diversity Analysis ◽  
Genetic Diversity Analysis ◽  
Polymorphic Microsatellite

scholarly journals Genetic diversity analysis ofGlycyrrhiza uralensisusing 8 novel polymorphic microsatellite markers

2016 ◽  
Vol 43 (2) ◽  
pp. 174-180 ◽  
Author(s):  
Yurry Um ◽  
Mei-Lan Jin ◽  
Yi Lee ◽  
Mok Hur ◽  
Seon Woo Cha ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Microsatellite Markers ◽  
Diversity Analysis ◽  
Genetic Diversity Analysis ◽  
Polymorphic Microsatellite

scholarly journals Plasmodium falciparum Recrudescence Two Years after Treatment of an Uncomplicated Infection without Return to an Area Where Malaria Is Endemic

2017 ◽  
Vol 62 (2) ◽  
Author(s):  
Denis Malvy ◽  
Marylin Torrentino-Madamet ◽  
Coralie L'Ollivier ◽  
Marie-Catherine Receveur ◽  
Fakhri Jeddi ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Plasmodium Falciparum ◽  
Microsatellite Markers ◽  
Malaria Infection ◽  
Diversity Analysis ◽  
Content Type ◽  
Genetic Diversity Analysis ◽  
Polymorphic Microsatellite

ABSTRACT We report evidence, confirmed by the lack of travel activity outside of France and genetic diversity analysis using polymorphic microsatellite markers, that Plasmodium falciparum malaria infection effectively treated with an artemisinin-based combination can remain dormant and relapse during pregnancy at least 2 years after treatment.

scholarly journals Genetic diversity analysis of Thai indigenous pig population using microsatellite markers

2019 ◽  
Vol 32 (10) ◽  
pp. 1491-1500 ◽  
Author(s):  
Rangsun Charoensook ◽  
Kesinee Gatphayak ◽  
Bertram Brenig ◽  
Christoph Knorr
Keyword(s):  
Genetic Diversity ◽  
Microsatellite Markers ◽  
Diversity Analysis ◽  
Genetic Diversity Analysis

scholarly journals Development of Pineapple Microsatellite Markers and Germplasm Genetic Diversity Analysis

2013 ◽  
Vol 2013 ◽  
pp. 1-11 ◽  
Author(s):  
Suping Feng ◽  
Helin Tong ◽  
You Chen ◽  
Jingyi Wang ◽  
Yeyuan Chen ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Microsatellite Markers ◽  
Genomic Library ◽  
Trinucleotide Repeats ◽  
The Other ◽  
Diversity Analysis ◽  
Dominant Type ◽  
Genetic Diversity Analysis ◽  
Ssr Loci ◽  
Ssr Development

Two methods were used to develop pineapple microsatellite markers. Genomic library-based SSR development: using selectively amplified microsatellite assay, 86 sequences were generated from pineapple genomic library. 91 (96.8%) of the 94 Simple Sequence Repeat (SSR) loci were dinucleotide repeats (39 AC/GT repeats and 52 GA/TC repeats, accounting for 42.9% and 57.1%, resp.), and the other three were mononucleotide repeats. Thirty-six pairs of SSR primers were designed; 24 of them generated clear bands of expected sizes, and 13 of them showed polymorphism. EST-based SSR development: 5659 pineapple EST sequences obtained from NCBI were analyzed; among 1397 nonredundant EST sequences, 843 were found containing 1110 SSR loci (217 of them contained more than one SSR locus). Frequency of SSRs in pineapple EST sequences is 1SSR/3.73 kb, and 44 types were found. Mononucleotide, dinucleotide, and trinucleotide repeats dominate, accounting for 95.6% in total. AG/CT and AGC/GCT were the dominant type of dinucleotide and trinucleotide repeats, accounting for 83.5% and 24.1%, respectively. Thirty pairs of primers were designed for each of randomly selected 30 sequences; 26 of them generated clear and reproducible bands, and 22 of them showed polymorphism. Eighteen pairs of primers obtained by the one or the other of the two methods above that showed polymorphism were selected to carry out germplasm genetic diversity analysis for 48 breeds of pineapple; similarity coefficients of these breeds were between 0.59 and 1.00, and they can be divided into four groups accordingly. Amplification products of five SSR markers were extracted and sequenced, corresponding repeat loci were found and locus mutations are mainly in copy number of repeats and base mutations in the flanking region.

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