Automatisches Pollen-Monitoring

Allergologie ◽  
2021 ◽  
Vol 44 (12) ◽  
pp. 932-942
Author(s):  
J. Buters ◽  
M. Gonzalez-Alonso ◽  
L. Klimek ◽  
J.C. Simon ◽  
R. Treudler
Keyword(s):  
2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Marcel Polling ◽  
Chen Li ◽  
Lu Cao ◽  
Fons Verbeek ◽  
Letty A. de Weger ◽  
...  

AbstractMonitoring of airborne pollen concentrations provides an important source of information for the globally increasing number of hay fever patients. Airborne pollen is traditionally counted under the microscope, but with the latest developments in image recognition methods, automating this process has become feasible. A challenge that persists, however, is that many pollen grains cannot be distinguished beyond the genus or family level using a microscope. Here, we assess the use of Convolutional Neural Networks (CNNs) to increase taxonomic accuracy for airborne pollen. As a case study we use the nettle family (Urticaceae), which contains two main genera (Urtica and Parietaria) common in European landscapes which pollen cannot be separated by trained specialists. While pollen from Urtica species has very low allergenic relevance, pollen from several species of Parietaria is severely allergenic. We collect pollen from both fresh as well as from herbarium specimens and use these without the often used acetolysis step to train the CNN model. The models show that unacetolyzed Urticaceae pollen grains can be distinguished with > 98% accuracy. We then apply our model on before unseen Urticaceae pollen collected from aerobiological samples and show that the genera can be confidently distinguished, despite the more challenging input images that are often overlain by debris. Our method can also be applied to other pollen families in the future and will thus help to make allergenic pollen monitoring more specific.


2020 ◽  
Author(s):  
Maryam Al-Nesf ◽  
Dorra Gharbi ◽  
Hassan M. Mobayed ◽  
Blessing Reena Dason ◽  
Ramzy Mohammed Ali ◽  
...  

2017 ◽  
Vol 11 (2) ◽  
pp. 937-948 ◽  
Author(s):  
Daniela Festi ◽  
Luca Carturan ◽  
Werner Kofler ◽  
Giancarlo dalla Fontana ◽  
Fabrizio de Blasi ◽  
...  

Abstract. Dating of ice cores from temperate non-polar glaciers is challenging and often problematic. However, a proper timescale is essential for a correct interpretation of the proxies measured in the cores. Here, we introduce a new method developed to obtain a sub-seasonal timescale relying on statistically measured similarities between pollen spectra obtained from core samples and daily airborne pollen monitoring samples collected in the same area. This approach was developed on a 10 m core retrieved from the temperate-firn portion of Alto dell'Ortles glacier (Eastern Italian Alps), for which a 5-year annual/seasonal timescale already exists. The aim was to considerably improve this timescale, reaching the highest possible temporal resolution and testing the efficiency and limits of pollen as a chronological tool. A test of the new timescale was performed by comparing our results to the output (date of layer formation) of the mass balance model EISModel, during the period encompassed by the timescale. The correspondence of the results supports the new sub-seasonal timescale based on pollen analysis. This comparison also allows us to draw important conclusions on the post-depositional effects of meltwater percolation on the pollen content of the firn core as well as on the climatic interpretation of the pollen signal.


2015 ◽  
Vol 68 (4) ◽  
pp. 367-372
Author(s):  
Irene Câmara Camacho ◽  
Rita Câmara ◽  
Roberto Camacho

<p>The pollinic spectrum of the Madeira region is dominated by grass pollen, which also represents an important aeroallergen in Europe. The present work aims to analyze the main features of the Poaceae pollen season in the Madeira region to determine the allergic risk. The study took place in Funchal city, the capital of Madeira Island, over a period of 10 years (2003–2012). The airborne pollen monitoring was carried out with a Hirst type volumetric trap, following well-established guidelines.</p><p>In the atmosphere of Funchal, the mean annual Poaceae pollen index was 229. The mean Poaceae pollen season lasts 275 days, with an onset date in January/March and an end date in November/December. Poaceae counts showed a seasonal variation with 2 distinct peaks: a higher peak between March and June, and the second one in autumn. The peak values occurred mainly between April and June, and the highest peak was 93 grains/m<sup>3</sup>, detected on the 27th May of 2010. The Poaceae pollen remaining at low levels during the whole growing season, presenting a nil to low allergenic risk during most of the study period. Higher critical levels of allergens have been revealed after 2006. In general, the pollen risk from Poaceae lasted only a few days per year, despite the very long pollen season and the abundance of grasses in the landscape of Madeira Island.</p>


Aerobiologia ◽  
1995 ◽  
Vol 11 (3) ◽  
pp. 189-194 ◽  
Author(s):  
Manuel Munuer Giner ◽  
José Sebastián Carrión García ◽  
Juan Guerra Montes

2020 ◽  
Vol 10 (1) ◽  
Author(s):  
Maryam A. Al-Nesf ◽  
Dorra Gharbi ◽  
Hassan M. Mobayed ◽  
Blessing Reena Dason ◽  
Ramzy Mohammed Ali ◽  
...  

Atmosphere ◽  
2019 ◽  
Vol 10 (11) ◽  
pp. 717
Author(s):  
Ricardo Navares ◽  
José Luis Aznarte

Airborne pollen monitoring datasets sometimes exhibit gaps, even very long, either because of maintenance or because of a lack of expert personnel. Despite the numerous imputation techniques available, not all of them effectively include the spatial relations of the data since the assumption of missing-at-random is made. However, there are several techniques in geostatistics that overcome this limitation such as the inverse distance weighting and Gaussian processes or kriging. In this paper, a new method is proposed that utilizes convolutional neural networks. This method not only shows a competitive advantage in terms of accuracy when compared to the aforementioned techniques by improving the error by 5% on average, but also reduces execution training times by 90% when compared to a Gaussian process. To show the advantages of the proposal, 10%, 20%, and 30% of the data points are removed in the time series of a Poaceae pollen observation station in the region of Madrid, and the airborne concentrations from the remaining available stations in the network are used to impute the data removed. Even though the improvements in terms of accuracy are not significantly large, even if consistent, the gain in computational time and the flexibility of the proposed convolutional neural network allow field experts to adapt and extend the solution, for instance including meteorological variables, with the potential decrease of the errors reported in this paper.


2019 ◽  
Vol 688 ◽  
pp. 1263-1274 ◽  
Author(s):  
Jose Oteros ◽  
Mikhail Sofiev ◽  
Matt Smith ◽  
Bernard Clot ◽  
Athanasios Damialis ◽  
...  

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