scholarly journals Soil nitrogen transformation responses to seasonal precipitation changes are regulated by changes in functional microbial abundance in a subtropical forest

2017 ◽  
Author(s):  
Jie Chen ◽  
Guoliang Xiao ◽  
Yakov Kuzyakov ◽  
Darrel Jenerette ◽  
Ying Ma ◽  
...  

Abstract. More dry-season droughts and wet-season storms have been predicted in subtropical areas. Since subtropical forest soils are significant sources of N2O and NO3−, it is important to understand the features and determinants of N transformation responses to the predicted precipitation changes. A precipitation manipulation field experiment was conducted to reduce dry-season precipitation and increase wet-season precipitation, while keeping the annual precipitation unchanged in a subtropical forest. Net N mineralization, net nitrification, N2O emission, nitrifying (bacterial and archaeal amoA) and denitrifying (nirK, nirS and nosZ) genes abundance, microbial biomass carbon (MBC) and soil physicochemical properties were monitored to characterize and explain soil N transformation responses. Dry-season precipitation reduction decreased net nitrification and N mineralization rates by 13–20 %, while wet-season precipitation addition increased both rates by 50 %. More than 20 % of the total variation of net nitrification and N mineralization could be explained by microbial abundance and soil water content (SWC), but archaeal amoA abundance was the main factor. Increased net nitrification in wet season together with large precipitation events caused substantial NO3− losses via leaching. However, N2O emission decreased moderately either in dry or wet seasons due to changes in nosZ gene abundance, MBC, net nitrification and SWC (decreased by 10–21 %). We conclude that reducing dry-season precipitation and increasing wet-season precipitation affect N transformation mainly through altering functional microbial abundance and MBC, which are further determined by changes in DOC and NH4+ availabilities. Such contrasting precipitation pattern will increase droughts and NO3− leaching in subtropical forests.

2017 ◽  
Vol 14 (9) ◽  
pp. 2513-2525 ◽  
Author(s):  
Jie Chen ◽  
Guoliang Xiao ◽  
Yakov Kuzyakov ◽  
G. Darrel Jenerette ◽  
Ying Ma ◽  
...  

Abstract. The frequency of dry-season droughts and wet-season storms has been predicted to increase in subtropical areas in the coming decades. Since subtropical forest soils are significant sources of N2O and NO3−, it is important to understand the features and determinants of N transformation responses to the predicted precipitation changes. A precipitation manipulation field experiment was conducted in a subtropical forest to reduce dry-season precipitation and increase wet-season precipitation, with annual precipitation unchanged. Net N mineralization, net nitrification, N2O emission, nitrifying (bacterial and archaeal amoA) and denitrifying (nirK, nirS and nosZ) gene abundance, microbial biomass carbon (MBC), extractable organic carbon (EOC), NO3−, NH4+ and soil water content (SWC) were monitored to characterize and explain soil N transformation responses. Dry-season precipitation reduction decreased net nitrification and N mineralization rates by 13–20 %, while wet-season precipitation addition increased both rates by 50 %. More than 20 % of the total variation of net nitrification and N mineralization could be explained by microbial abundance and SWC. Notably, archaeal amoA abundance showed the strongest correlation with net N transformation rates (r  ≥  0.35), suggesting the critical role of archaeal amoA abundance in determining N transformations. Increased net nitrification in the wet season, together with large precipitation events, caused substantial NO3− losses via leaching. However, N2O emission decreased moderately in both dry and wet seasons due to changes in nosZ gene abundance, MBC, net nitrification and SWC (decreased by 10–21 %). We conclude that reducing dry-season precipitation and increasing wet-season precipitation affect soil N transformations through altering functional microbial abundance and MBC, which are further affected by changes in EOC and NH4+ availabilities.


Water ◽  
2021 ◽  
Vol 13 (3) ◽  
pp. 320
Author(s):  
Qianyao Si ◽  
Mary G. Lusk ◽  
Patrick W. Inglett

Stormwater infiltration basins (SIBs) are vegetated depressions that collect stormwater and allow it to infiltrate to underlying groundwater. Their pollutant removal efficiency is affected by the properties of the soils in which they are constructed. We assessed the soil nitrogen (N) cycle processes that produce and remove inorganic N in two urban SIBs, with the goal of further understanding the mechanisms that control N removal efficiency. We measured net N mineralization, nitrification, and potential denitrification in wet and dry seasons along a sedimentation gradient in two SIBs in the subtropical Tampa, Florida urban area. Net N mineralization was higher in the wet season than in the dry season; however, nitrification was higher in the dry season, providing a pool of highly mobile nitrate that would be susceptible to leaching during periodic dry season storms or with the onset of the following wet season. Denitrification decreased along the sediment gradient from the runoff inlet zone (up to 5.2 μg N/g h) to the outermost zone (up to 3.5 μg N/g h), providing significant spatial variation in inorganic N removal for the SIBs. Sediment accumulating around the inflow areas likely provided a carbon source, as well as maintained stable anaerobic conditions, which would enhance N removal.


2010 ◽  
Vol 40 (3) ◽  
pp. 436-444 ◽  
Author(s):  
Frank S. Gilliam ◽  
Adam Cook ◽  
Salina Lyter

This study examined effects of soil freezing on N dynamics in soil along an N processing gradient within a mixed hardwood dominated watershed at Fernow Experimental Forest, West Virginia. Sites were designated as LN (low rates of N processing), ML (moderately low), MH (moderately high), and HN (high). Soils underwent three 7-day freezing treatments (0, –20, or –80 °C) in the laboratory. Responses varied between temperature treatments and along the gradient. Initial effects differed among freezing treatments for net N mineralization, but not nitrification, in soils across the gradient, generally maintained at LN < ML ≤ MH < HN for all treatments. Net N mineralization potential was higher following freezing at –20 and –80 °C than control; all were higher than at 0 °C. Net nitrification potential exhibited similar patterns. LN was an exception, with net nitrification low regardless of treatment. Freezing response of N mineralization differed greatly from that of nitrification, suggesting that soil freezing may decouple two processes of the soil N cycle that are otherwise tightly linked at our site. Results also suggest that soil freezing at temperatures commonly experienced at this site can further increase net nitrification in soils already exhibiting high nitrification from N saturation.


1999 ◽  
Vol 29 (4) ◽  
pp. 497-508 ◽  
Author(s):  
Kiyokazu Ohrui ◽  
Myron J Mitchell ◽  
Joseph M Bischoff

Within a forest ecosystem in the Adirondack Mountains of New York, net N mineralization and nitrification rates were measured at different landscape positions (zones). Net N mineralization rates (0-15 cm depth) were less (39 kg N·ha-1 per year) within a wetland without alder and with a coniferous overstory than an upland conifer zone (82 kg N·ha-1 per year) and an upland hardwood zone (107 kg N·ha-1 per year). Net N mineralization rates (39 to 82 kg N·ha-1 per year) and the forest floor N concentrations (2.3 to 2.5%) were higher than values reported (1.2-29 kg N·ha-1 and 1.1-2.12%, respectively) for other spruce forests. The net nitrification rates were higher at the upland hardwood zone (29 kg N·ha-1 per year) than the upland conifer zone (2 kg N·ha-1 per year). The wetland conifer zone without alders had an intermediate rate of net nitrification (13 kg N·ha-1 per year) compared with the upland zones. The presence of white alder (Alnus incana (L.) Moench) in the wetland increased the NO3- content and net nitrification rate of the soil.


2016 ◽  
Vol 13 (18) ◽  
pp. 5395-5403 ◽  
Author(s):  
Maya Almaraz ◽  
Stephen Porder

Abstract. There are many proxies used to measure nitrogen (N) availability in watersheds, but the degree to which they do (or do not) correlate within a watershed has not been systematically addressed. We surveyed the literature for intact forest or grassland watersheds globally, in which several metrics of nitrogen availability have been measured. Our metrics included the following: foliar δ15N, soil δ15N, net nitrification, net N mineralization, and the ratio of dissolved inorganic to organic nitrogen (DIN : DON) in soil solution and streams. We were particularly interested in whether terrestrial and stream based proxies for N availability were correlated where they were measured in the same place. Not surprisingly, the strongest correlation (Kendall's τ) was between net nitrification and N mineralization (τ  =  0.71, p < 0.0001). Net nitrification and N mineralization were each correlated with foliar and soil δ15N (p < 0.05). Foliar and soil δ15N were more tightly correlated in tropical sites (τ  =  0.68, p < 0.0001), than in temperate sites (τ  =  0.23, p  =  0.02). The only significant correlations between terrestrial- and water-based metrics were those of net nitrification (τ  =  0.48, p  =  0.01) and N mineralization (τ  =  0.69, p  =  0.0001) with stream DIN : DON. The relationship between stream DIN : DON with both net nitrification and N mineralization was significant only in temperate, but not tropical regions. To our surprise, we did not find a significant correlation between soil δ15N and stream DIN : DON, despite the fact that both have been used to infer spatially or temporally integrated N status. Given that both soil δ15N and stream DIN : DON are used to infer long-term N status, their lack of correlation in watersheds merits further investigation.


2019 ◽  
Vol 16 (21) ◽  
pp. 4277-4291
Author(s):  
Yanxia Nie ◽  
Xiaoge Han ◽  
Jie Chen ◽  
Mengcen Wang ◽  
Weijun Shen

Abstract. Elevated nitrogen (N) deposition affects soil N transformations in the N-rich soil of tropical forests. However, the change in soil functional microorganisms responsible for soil N cycling remains largely unknown. Here, we investigated the variation in soil inorganic N content, net N mineralization (Rm), net nitrification (Rn), inorganic N leaching (Rl), N2O efflux and N-related functional gene abundance in a tropical forest soil over a 2-year period with four levels of N addition. The responses of soil net N transformations (in situ Rm and Rn) and Rl to N additions were negligible during the first year of N inputs. The Rm, Rn, and Rl increased with the medium nitrogen (MN) and high nitrogen (HN) treatments relative to the control treatments in the second year of N additions. Furthermore, the Rm, Rn, and Rl were higher in the wet season than in the dry season. The Rm and Rn were mainly associated with the N addition-induced lower C:N ratio in the dry season but with higher microbial biomass in the wet season. Throughout the study period, high N additions increased the annual N2O emissions by 78 %. Overall, N additions significantly facilitated Rm, Rn, Rl and N2O emission. In addition, the MN and HN treatments increased the ammonia-oxidizing archaea (AOA) abundance by 17.3 % and 7.5 %, respectively. Meanwhile, the HN addition significantly increased the abundance of nirK denitrifiers but significantly decreased the abundance of ammonia-oxidizing bacteria (AOB) and nosZ-containing N2O reducers. To some extent, the variation in functional gene abundance was related to the corresponding N-transformation processes. Partial least squares path modelling (PLS-PM) indicated that inorganic N contents had significantly negative direct effects on the abundances of N-related functional genes in the wet season, implying that chronic N deposition would have a negative effect on the N-cycling-related microbes and the function of N transformation. Our results provide evidence that elevated N deposition may impose consistent stimulatory effects on soil N-transformation rates but differentiated impacts on related microbial functional genes. Long-term experimentation or observations are needed to decipher the interrelations between the rate of soil N-transformation processes and the abundance or expression of related functional genes.


1989 ◽  
Vol 19 (12) ◽  
pp. 1521-1526 ◽  
Author(s):  
Donald R. Zak ◽  
George E. Host ◽  
Kurt S. Pregitzer

Potential net nitrogen (N) mineralization, potential net nitrification, and overstory (boles and branches) biomass were measured in nine forest ecosystems commonly found within the well-drained uplands of northern Lower Michigan. The ecosystem types ranged from oak-dominated forests on coarse-textured outwash sands to mesic northern hardwood forests on sandy glacial till. Overstory biomass was calculated using species-specific allometric equations developed for Lake States hardwood species. Potential net N mineralization and potential net nitrification were measured by a 30-day aerobic laboratory soil incubation. Analyses of (co)variance were used to determine differences in potential N mineralization, net nitrification, overstory biomass, and biomass increment among the nine ecosystem types. Linear and nonlinear regression analyses were used to predict overstory biomass and biomass increment using potential net N mineralization as the independent variable. Overstory biomass ranged from 92 t•ha−1 in a xeric oak ecosystem to 243 t•ha−1 in a northern hardwood ecosystem; annual biomass production ranged from 1.3 to 3.5 t•ha−1 year−1, respectively. Potential net N mineralization was lowest in the xeric oak ecosystem (52.0 μg N•g−1) and greatest in the mesic northern hardwood ecosystem (127.8 μg N•g−1). Potential net nitrification was 45.5 μg NO3−-N•g−1 in the northern hardwood ecosystem; 10 to 230 times greater than in other ecosystems. A saturating exponential model (y = a(1–e−kx) + c) produced the smallest residual mean squares in predicting overstory biomass (R2 = 0.822) and annual biomass increment (R2 = 0.847) from potential net N mineralization. Maximum overstory biomass and biomass increment predicted from this equation were 247 t•ha−1 and 3.7 t•ha−1, respectively. In addition, laboratory net N mineralization potentials were highly correlated with annual rates of N mineralization determined by insitu incubation (r2 = 0.849). Overstory biomass and woody biomass increment were poorly correlated with potential net nitrification. The exponential function used to predict biomass increment from N mineralization suggests that the productivity of some northern hardwood forests in northern Lower Michigan is not limited by N availability.


2015 ◽  
Vol 45 (7) ◽  
pp. 958-962 ◽  
Author(s):  
Frank S. Gilliam ◽  
Julia E. Galloway ◽  
Jacob S. Sarmiento

This study examined the effects of temperature on soil nitrogen (N) dynamics and variation with slope aspect (northeast (NE) versus southwest (SW)) at two forested sites in West Virginia — Beech Fork Lake (BFL) and Fernow Experimental Forest (FEF) — with similar soil and overstory characteristics but with different latitudes and elevations. Previous work on mineral soil from both sites had shown sharp differences in microbial communities between SW slopes and NE slopes. Mineral soil was sampled from three and eight plots per aspect at FEF and BFL, respectively. Inorganic N was extracted from samples, which were then divided into polyethylene bags for 7-day incubations at 4 °C, 15 °C, 25 °C, and 35 °C. Following incubation, soils were extracted and analyzed for inorganic N. Net N mineralization varied significantly between aspects and temperatures but did not vary between sites; net nitrification varied significantly between aspects, temperatures, and sites. Net N mineralization increased with incubation temperature at all aspects and sites. Net nitrification rates increased with incubation temperature for BFL soils; however, maximum net nitrification rates occurred at 20–25 °C for FEF soils. Net nitrification was essentially undetectable for SW soils at either site. Results underline the complexities of the N cycle in temperate forest ecosystems, representing challenges in predicting alterations in soil N dynamics under conditions of global climate change.


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