Impact of Low pH on Microbial Growth Rate, ATP Production, and NADH to NAD+ ratio

2020 ◽  
Vol 29 (3) ◽  
pp. 121-128
Author(s):  
Shymaa Enany

Background: Bacterial metabolism is the tendency of bacteria to live, function, and replicate fittingly under their current culture and varied environment conditions. Microorganisms have intricated metabolic regulatory mechanisms to ameliorate environmental stresses. Objectives: We examined the effect of acidic pH, as one of stresses, on growth rate and metabolism of five different microorganisms. Methodology: ATP level, as an indicator for microbial viability, and alterations in NADH/NAD+ ratio, which plays a critical role in microbial metabolism, were assessed. Results: Our results showed that alterations in pH influence metabolism of different bacterial species with different extent. The growth rate of Pseudomonas aeruginosa, Escherichia coli and Bacillus Subtilis were diminished with an elevation in ATP and NADH/NAD+ ratio at low pH. Contrary, MRSA and MSSA showed trivial alterations for ATP and NADH/NAD+ ratio. Conclusion: Ultimately, this study affirmed differences in metabolism between different species and confirmed that alterations in pH influenced the metabolism and hence the pathogenesis.

1998 ◽  
Vol 37 (4-5) ◽  
pp. 259-262 ◽  
Author(s):  
Bjarne R. Horntvedt ◽  
Morten Rambekk ◽  
Rune Bakke

This paper presents a strategy in which mixed biological cultures are exposed to oscillating concentration levels, to improve the potential for coexistence of desired bacterial species. A mechanistic mathematical model is constructed to investigate and illustrate this strategy. This paper is focused on competition between nitrifying, denitrifying and aerobic heterotrophic bacteria in a CSTR with sludge recycle. For nitrifying and aerobic heterotrophic cultures, the effect of sinusoidal oscillations in DO levels with an amplitude of 1.0 mg/l is a 16% specific growth rate reduction compared to that at a constant DO level. The denitrifiers growth rate is increased by an average of 59%, compared to the constant DO level situation. A similar strategy has been tested in a pilot plant. It is concluded that the influence on specific growth rates is a function of the amplitude of the oscillations. The effects are greatest when concentrations fluctuate around the half saturation concentration of the rate limiting component(s).


2020 ◽  
Vol 17 (4) ◽  
pp. 498-506 ◽  
Author(s):  
Pavan K. Mujawdiya ◽  
Suman Kapur

: Quorum Sensing (QS) is a phenomenon in which bacterial cells communicate with each other with the help of several low molecular weight compounds. QS is largely dependent on population density, and it triggers when the concentration of quorum sensing molecules accumulate in the environment and crosses a particular threshold. Once a certain population density is achieved and the concentration of molecules crosses a threshold, the bacterial cells show a collective behavior in response to various chemical stimuli referred to as “auto-inducers”. The QS signaling is crucial for several phenotypic characteristics responsible for bacterial survival such as motility, virulence, and biofilm formation. Biofilm formation is also responsible for making bacterial cells resistant to antibiotics. : The human gut is home to trillions of bacterial cells collectively called “gut microbiota” or “gut microbes”. Gut microbes are a consortium of more than 15,000 bacterial species and play a very crucial role in several body functions such as metabolism, development and maturation of the immune system, and the synthesis of several essential vitamins. Due to its critical role in shaping human survival and its modulating impact on body metabolisms, the gut microbial community has been referred to as “the forgotten organ” by O`Hara et al. (2006) [1]. Several studies have demonstrated that chemical interaction between the members of bacterial cells in the gut is responsible for shaping the overall microbial community. : Recent advances in phytochemical research have generated a lot of interest in finding new, effective, and safer alternatives to modern chemical-based medicines. In the context of antimicrobial research various plant extracts have been identified with Quorum Sensing Inhibitory (QSI) activities among bacterial cells. This review focuses on the mechanism of quorum sensing and quorum sensing inhibitors isolated from natural sources.


2019 ◽  
Vol 39 (1) ◽  
Author(s):  
Xuan Li ◽  
Jia Liu ◽  
Qingguo Lu ◽  
Di Ren ◽  
Xiaodong Sun ◽  
...  

Abstract Heart failure (HF) is a serious disease with high mortality. The incidence of this disease has continued to increase over the past decade. All cardiovascular diseases causing dysfunction of various physiological processes can result in HF. AMP-activated protein kinase (AMPK), an energy sensor, has pleiotropic cardioprotective effects and plays a critical role in the progression of HF. In this review, we highlight that AMPK can not only improve the energy supply in the failing heart by promoting ATP production, but can also regulate several important physiological processes to restore heart function. In addition, we discuss some aspects of some potential clinical drugs which have effects on AMPK activation and may have value in treating HF. More studies, especially clinical trials, should be done to evaluate manipulation of AMPK activation as a potential means of treating HF.


2021 ◽  
Author(s):  
Yuping Ning ◽  
Yi Cai ◽  
Youchao Dai ◽  
Fuxiang Li ◽  
Siwei Mo ◽  
...  

Mitochondria as a highly dynamic organelle continuously changes morphology and position during its life cycle. Mitochondrial dynamics including fission and fusion play a critical role in maintaining functional mitochondria for ATP production, which is directly linked to host defense against Mtb infection. However, how macrophages regulate mitochondrial dynamics during Mycobacterium tuberculosis (Mtb) infection remains elusive. In this study, we found that Mtb infection induced mitochondrial fusion through enhancing the expression of mitofusin 1 ( MFN1 ), which resulted in increased ATP production. Silencing MFN1 inhibited mitochondrial fusion and subsequently reduced ATP production, which, in turn, severely impaired macrophages mycobactericidal activity by inhibiting autophagy. Impairment of mycobactericidal activity and autophagy was replicated using oligomycin, an inhibitor of ATP synthase. In summary, our study revealed MFN1-mediated mitochondrial fusion is essential for macrophages mycobactericidal activity through the regulation of ATP dependent autophagy. MFN1-mediated metabolism pathway might be targets for development of host direct therapy (HDT) strategy against TB.


2017 ◽  
Vol 38 (2) ◽  
pp. 89-97 ◽  
Author(s):  
Yoshimi TSUDA ◽  
Manabu IGARASHI ◽  
Ryo ITO ◽  
Sanae NISHIO ◽  
Kenta SHIMIZU ◽  
...  

Blood ◽  
2008 ◽  
Vol 112 (4) ◽  
pp. 1493-1502 ◽  
Author(s):  
Mondira Kundu ◽  
Tullia Lindsten ◽  
Chia-Ying Yang ◽  
Junmin Wu ◽  
Fangping Zhao ◽  
...  

Abstract Production of a red blood cell's hemoglobin depends on mitochondrial heme synthesis. However, mature red blood cells are devoid of mitochondria and rely on glycolysis for ATP production. The molecular basis for the selective elimination of mitochondria from mature red blood cells remains controversial. Recent evidence suggests that clearance of both mitochondria and ribosomes, which occurs in reticulocytes following nuclear extrusion, depends on autophagy. Here, we demonstrate that Ulk1, a serine threonine kinase with homology to yeast atg1p, is a critical regulator of mitochondrial and ribosomal clearance during the final stages of erythroid maturation. However, in contrast to the core autophagy genes such as atg5 and atg7, expression of ulk1 is not essential for induction of macroautophagy in response to nutrient deprivation or for survival of newborn mice. Together, these data suggest that the ATG1 homologue, Ulk1, is a component of the selective autophagy machinery that leads to the elimination of organelles in erythroid cells rather that an essential mechanistic component of autophagy.


2021 ◽  
Author(s):  
Tatjana Živković ◽  
Alyssa A Carell ◽  
Gustaf Granath ◽  
Mats B Nilsson ◽  
Manuel Helbig ◽  
...  

<p>Peatlands store about third of the terrestrial carbon (C) and exert long-term climate cooling. Dominant plant genera in acidic peatlands, <em>Sphagnum</em> mosses, are main contributors to net primary productivity. Through associative relationships with diverse microbial organisms (microbiome), <em>Sphagnum</em> mosses control major biogeochemical processes, namely uptake, storage and potential release of carbon and nitrogen. Climate warming is expected to negatively impact C accumulation in peatlands and alter nutrient cycling, however <em>Sphagnum</em>-dominated peatland resilience to climate warming may depend on <em>Sphagnum</em>-microbiome associations. The ability of the microbiome to rapidly acclimatize to warming may aid <em>Sphagnum</em> exposed to elevated temperatures through host-microbiome acquired thermotolerance. We investigated the role of the microbiome on <em>Sphagnum</em>’s ability to acclimate to elevated temperatures using a microbiome-transfer approach to test: a) whether the thermal origin of the microbiome influences acclimation of <em>Sphagnum</em> growth and b) if microbial benefits to <em>Sphagnum</em> growth depend on donor <em>Sphagnum</em> species.</p><p>            Using a full-factorial design, microbiomes were separated from <em>Sphagnum</em> “donor” species from four different peatlands across a wide range of thermal environments (11.4-27°C). The microbiomes were transferred onto germ-free “recipient” <em>Sphagnum</em> species in the laboratory and exposed to a range of experimental temperatures (8.5 – 26.5°C) for growth analysis over 4 weeks.</p><p>            Normalized growth rates were maximized for plants that received a microbiome from a matched “donor” and with a similar origin temperature (ΔT<sub>treatment-origin</sub>: 0.3±0.9°C [±standard error], p = 0.73). For non-matched “donor-recipient” <em>Sphagnum</em> pairs, ΔT<sub>treatment-origin</sub> was slightly negative with -4.1±2.1°C (p = 0.06). The largest growth rate of the “recipient” was measured when grown with a microbiome from a matching “donor” <em>Sphagnum</em> species and was 252% and 48% larger than the maximum growth rate of the germ-free <em>Sphagnum</em> and the non-matched “donor-recipient” <em>Sphagnum</em> pairs, respectively.</p><p>            Our results suggest that the composition of the <em>Sphagnum</em> microbiome plays a critical role in host plant temperature acclimation. We found that microbially-provided benefits to the host plant were most pronounced when: 1) the thermal origin of the microbiome is similar to experimental temperatures, and 2) when donor and recipient <em>Sphagnum</em> species are the same. Together, these results suggest that <em>Sphagnum</em> temperature acclimation can be modulated, in part, by microbial interactions and may potentially play a role in peatland resilience to climate warming.</p>


2019 ◽  
Vol 9 (23) ◽  
pp. 5019 ◽  
Author(s):  
Theofania Tsironi ◽  
Athina Ntzimani ◽  
Eleni Gogou ◽  
Maria Tsevdou ◽  
Ioanna Semenoglou ◽  
...  

The aim of the study was the evaluation and mathematical modeling of the effect of active modified atmosphere packaging (MAP), by the incorporation of CO2 emitters in the package, on the microbial stability and shelf life of gutted sea bass during refrigerated storage. Gutted sea bass samples were packaged in modified atmosphere (50% CO2–40% N2–10% O2) with and without CO2 emitters (ACT-MAP, MAP) (gas/product volume ratio 3:1) and stored at isothermal conditions: 0 °C, 5 °C, and 10 °C. The gas concentration in the package headspace (%CO2, %O2) and microbial growth (total viable count, TVC, Pseudomonas spp., Enterobacteriaceae spp., lactic acid bacteria) were monitored during storage. The microbial growth was modeled using the Baranyi growth model, and the kinetic parameters (microbial growth rate, lag phase) were estimated at the tested temperature and packaging conditions. The results showed that the ACT-MAP samples presented significantly lower microbial growth compared to the MAP samples. The growth rate of the total viable count at 0 °C was 0.175 and 0.138 d−1 for the MAP and ACT-MAP sea bass, respectively (p < 0.05). The shelf life of the MAP sea bass at 0–10 °C (based on a final TVC value: 7 log CFU g−1) was extended 4–7 days with the addition of a CO2 emitter in the package. The CO2 concentration in the ACT-MAP samples was stabilized at approximately 60%, while the CO2 in the MAP samples was approximately 40% at the end of the shelf life.


2020 ◽  
Vol 33 (5) ◽  
pp. 705-714 ◽  
Author(s):  
Ya-Wen He ◽  
Xue-Qiang Cao ◽  
Alan R. Poplawsky

Xanthomonadins are membrane-bound yellow pigments that are typically produced by phytopathogenic bacterial Xanthomonas spp., Xylella fastidiosa, and Pseudoxanthomonas spp. They are also produced by a diversity of environmental bacterial species. Considerable research has revealed that they are a unique group of halogenated, aryl-polyene, water-insoluble pigments. Xanthomonadins have been shown to play important roles in epiphytic survival and host-pathogen interactions in the phytopathogen Xanthomonas campestris pv. campestris, which is the causal agent of black rot in crucifers. Here, we review recent advances in the understanding of xanthomonadin chemical structures, physiological roles, biosynthetic pathways, regulatory mechanisms, and crosstalk with other signaling pathways. The aim of the present review is to provide clues for further in-depth research on xanthomonadins from Xanthomonas and other related bacterial species.


mBio ◽  
2019 ◽  
Vol 10 (4) ◽  
Author(s):  
Paola K. Párraga Solórzano ◽  
Jiangwei Yao ◽  
Charles O. Rock ◽  
Thomas E. Kehl-Fie

ABSTRACT During infection, bacteria use two-component signal transduction systems to sense and adapt to the dynamic host environment. Despite critically contributing to infection, the activating signals of most of these regulators remain unknown. This also applies to the Staphylococcus aureus ArlRS two-component system, which contributes to virulence by coordinating the production of toxins, adhesins, and a metabolic response that enables the bacterium to overcome host-imposed manganese starvation. Restricting the availability of essential transition metals, a strategy known as nutritional immunity, constitutes a critical defense against infection. In this work, expression analysis revealed that manganese starvation imposed by the immune effector calprotectin or by the absence of glycolytic substrates activates ArlRS. Manganese starvation imposed by calprotectin also activated the ArlRS system even when glycolytic substrates were present. A combination of metabolomics, mutational analysis, and metabolic feeding experiments revealed that ArlRS is activated by alterations in metabolic flux occurring in the latter half of the glycolytic pathway. Moreover, calprotectin was found to induce expression of staphylococcal leukocidins in an ArlRS-dependent manner. These studies indicated that ArlRS is a metabolic sensor that allows S. aureus to integrate multiple environmental stresses that alter glycolytic flux to coordinate an antihost response and to adapt to manganese starvation. They also established that the latter half of glycolysis represents a checkpoint to monitor metabolic state in S. aureus. Altogether, these findings contribute to understanding how invading pathogens, such as S. aureus, adapt to the host during infection and suggest the existence of similar mechanisms in other bacterial species. IMPORTANCE Two-component regulatory systems enable bacteria to adapt to changes in their environment during infection by altering gene expression and coordinating antihost responses. Despite the critical role of two-component systems in bacterial survival and pathogenesis, the activating signals for most of these regulators remain unidentified. This is exemplified by ArlRS, a Staphylococcus aureus global regulator that contributes to virulence and to resisting host-mediated restriction of essential nutrients, such as manganese. In this report, we demonstrate that manganese starvation and the absence of glycolytic substrates activate ArlRS. Further investigations revealed that ArlRS is activated when the latter half of glycolysis is disrupted, suggesting that S. aureus monitors flux through the second half of this pathway. Host-imposed manganese starvation also induced the expression of pore-forming toxins in an ArlRS-dependent manner. Cumulatively, this work reveals that ArlRS acts as a sensor that links nutritional status, cellular metabolism, and virulence regulation.


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