scholarly journals Identification of grapevine rootstock cultivars using expressed sequence tag-simple sequence repeats

2014 ◽  
Vol 13 (3) ◽  
pp. 7649-7657
Author(s):  
X.C. Fan ◽  
J.Q. Chu ◽  
C.H. Liu ◽  
X. Sun ◽  
J.G. Fang
Keyword(s):  
Simple Sequence Repeats ◽  
Expressed Sequence Tag ◽  
Expressed Sequence ◽  
Simple Sequence

scholarly journals Development of EST-derived SSR Markers with Long-core Repeat in Olive and Their Use for Paternity Testing

2013 ◽  
Vol 138 (4) ◽  
pp. 290-296 ◽  
Author(s):  
Raúl De la Rosa ◽  
Angjelina Belaj ◽  
Antonio Muñoz-Mérida ◽  
Oswaldo Trelles ◽  
Inmaculada Ortíz-Martín ◽  
...  
Keyword(s):  
Ssr Markers ◽  
Simple Sequence Repeats ◽  
Expressed Sequence Tag ◽  
Paternity Testing ◽  
High Level ◽  
Repeated Motifs ◽  
Expressed Sequence ◽  
Simple Sequence ◽  
Olive Breeding ◽  
Genomic Project

In the present work, a set of eight new hexa-nucleotide simple sequence repeats (SSRs) is reported in olive (Olea europaea L). These SSRs loci were generated on the basis of expressed sequence tag (EST) sequences in the frame of an olive genomic project. The markers showed a high level of polymorphism when tested on a set of cultivars used as genitors in the olive breeding program of Córdoba, Spain. The long-core repeat motif of these markers allows a wider separation among alleles, thus permitting an accurate genotyping. Besides, these markers showed comparable levels of polymorphism to di-nucleotide SSRs, the only ones so far reported in olive. Selected on the basis of their discrimination capacity, four of the eight SSRs were used to test their ability for paternity testing in a total of 81 seedlings coming from 12 crosses. The paternity testing showed that seven crosses matched the alleged paternity and the remaining five were products of illicit pollinations. These results exactly matched with previous paternity testing performed with di-nucleotide SSR markers. These results demonstrate the usefulness of the developed hexa-nucleotide repeated motifs for checking the paternity of breeding progenies and suggest their use on variability studies.

Physical Mapping of Wheat and Rye Expressed Sequence Tag–Simple Sequence Repeats on Wheat Chromosomes

Crop Science ◽  
2007 ◽  
Vol 47 (S1) ◽  
Author(s):  
Amita Mohan ◽  
Aakash Goyal ◽  
Ravinder Singh ◽  
Harindra S. Balyan ◽  
Pushpendra K. Gupta
Keyword(s):  
Physical Mapping ◽  
Simple Sequence Repeats ◽  
Expressed Sequence Tag ◽  
Expressed Sequence ◽  
Simple Sequence

scholarly journals In silico identification of putative expressed sequence tag (EST)-simple sequence repeats (SSRs) markers of resistance to Meloidogyne spp. in common bean

2016 ◽  
Vol 11 (23) ◽  
pp. 2007-2012
Author(s):  
Donizetti Vieira Lucas ◽  
Oliveira da Silva Juliana ◽  
C eacute sar de Oliveira Pereira Caio ◽  
Aline de Carvalho Solange ◽  
Diogenes Dias Silveira Ricardo ◽  
...  
Keyword(s):  
Common Bean ◽  
Simple Sequence Repeats ◽  
In Silico ◽  
Expressed Sequence Tag ◽  
Meloidogyne Spp ◽  
In Silico Identification ◽  
Ssrs Markers ◽  
Expressed Sequence ◽  
Simple Sequence

Expressed sequence tag-simple sequence repeats isolated fromShorea leprosulaand their transferability to 36 species within the Dipterocarpaceae

2009 ◽  
Vol 9 (1) ◽  
pp. 393-398 ◽  
Author(s):  
KEVIN KIT SIONG NG ◽  
SOON LEONG LEE ◽  
YOSHIHIKO TSUMURA ◽  
SANEYOSHI UENO ◽  
CHIN HONG NG ◽  
...  
Keyword(s):  
Simple Sequence Repeats ◽  
Expressed Sequence Tag ◽  
Expressed Sequence ◽  
Simple Sequence

Development of expressed sequence tag derived-simple sequence repeats in the genus Lilium

2011 ◽  
Vol 33 (6) ◽  
pp. 727-733 ◽  
Author(s):  
Sung-Il Lee ◽  
Kyong-Cheul Park ◽  
Ye-Su Song ◽  
Jae-Han Son ◽  
Soon-Jae Kwon ◽  
...  
Keyword(s):  
Simple Sequence Repeats ◽  
Expressed Sequence Tag ◽  
Expressed Sequence ◽  
Simple Sequence
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