scholarly journals Genome-Wide SNPs Identification and Determination of Proteins Associated with Stress Response in Sorghum (<i>Sorghum bicolor</i> L. Monech) Accessions

2017 ◽  
Vol 08 (07) ◽  
pp. 1624-1631
Author(s):  
Hind Emad Fadoul ◽  
Marmar A. El Siddig ◽  
Abdel Wahab H. Abdalla ◽  
Adil A. El Hussein
Keyword(s):  
Stress Response ◽  
Sorghum Bicolor ◽  
Genome Wide

scholarly journals Genome-wide analysis of growth-regulating factors (GRFs) in Triticum aestivum

PeerJ ◽  
2021 ◽  
Vol 9 ◽  
pp. e10701
Author(s):  
Wendi Huang ◽  
Yiqin He ◽  
Lei Yang ◽  
Chen Lu ◽  
Yongxing Zhu ◽  
...  
Keyword(s):  
Triticum Aestivum ◽  
Stress Response ◽  
Pcr Analysis ◽  
Synteny Analysis ◽  
Wheat Growth ◽  
Qrt Pcr ◽  
Genome Wide ◽  
Wheat Development ◽  
Motif Composition

The Growth-Regulating Factor (GRF) family encodes a type of plant-specific transcription factor (TF). GRF members play vital roles in plant development and stress response. Although GRF family genes have been investigated in a variety of plants, they remain largely unstudied in bread wheat (Triticum aestivum L.). The present study was conducted to comprehensively identify and characterize the T. aestivum GRF (TaGRF) gene family members. We identified 30 TaGRF genes, which were divided into four groups based on phylogenetic relationship. TaGRF members within the same subgroup shared similar motif composition and gene structure. Synteny analysis suggested that duplication was the dominant reason for family member expansion. Expression pattern profiling showed that most TaGRF genes were highly expressed in growing tissues, including shoot tip meristems, stigmas and ovaries, suggesting their key roles in wheat growth and development. Further qRT-PCR analysis revealed that all 14 tested TaGRFs were significantly differentially expressed in responding to drought or salt stresses, implying their additional involvement in stress tolerance of wheat. Our research lays a foundation for functional determination of TaGRFs, and will help to promote further scrutiny of their regulatory network in wheat development and stress response.

scholarly journals Determination of Genetic Structure and Signatures of Selection in Three Strains of Tanzania Shorthorn Zebu, Boran and Friesian Cattle by Genome-Wide SNP Analyses

PLoS ONE ◽  
2017 ◽  
Vol 12 (1) ◽  
pp. e0171088 ◽  
Author(s):  
George Msalya ◽  
Eui-Soo Kim ◽  
Emmanuel L. K. Laisser ◽  
Maulilio J. Kipanyula ◽  
Esron D. Karimuribo ◽  
...  
Keyword(s):  
Genetic Structure ◽  
Genome Wide ◽  
Signatures Of Selection ◽  
Friesian Cattle

scholarly journals Stress response regulators identified through genome-wide transcriptome analysis of the (p)ppGpp-dependent response in Rhizobium etli

2011 ◽  
Vol 12 (2) ◽  
pp. R17 ◽  
Author(s):  
Maarten Vercruysse ◽  
Maarten Fauvart ◽  
Ann Jans ◽  
Serge Beullens ◽  
Kristien Braeken ◽  
...  
Keyword(s):  
Stress Response ◽  
Transcriptome Analysis ◽  
Rhizobium Etli ◽  
Response Regulators ◽  
Genome Wide

scholarly journals Genome-wide screen for inositol auxotrophy in Saccharomyces cerevisiae implicates lipid metabolism in stress response signaling

2010 ◽  
Vol 285 (2) ◽  
pp. 125-149 ◽  
Author(s):  
Manuel J. Villa-García ◽  
Myung Sun Choi ◽  
Flora I. Hinz ◽  
María L. Gaspar ◽  
Stephen A. Jesch ◽  
...  
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Lipid Metabolism ◽  
Stress Response ◽  
Genome Wide
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