A Modified Hidden Markov Model and Its Application in Protein Secondary Structure Prediction

Sima Naghizadeh; Vahid Rezaeitabar; Hamid Pezeshk

doi:10.4172/jpb.1000209

A Modified Hidden Markov Model and Its Application in Protein Secondary Structure Prediction

Journal of Proteomics & Bioinformatics ◽

10.4172/jpb.1000209 ◽

2012 ◽

Vol 05 (01) ◽

Author(s):

Sima Naghizadeh ◽

Vahid Rezaeitabar ◽

Hamid Pezeshk

Keyword(s):

Secondary Structure ◽

Markov Model ◽

Hidden Markov Model ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Hidden Markov ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction

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PRT-HMM: A Novel Hidden Markov Model for Protein Secondary Structure Prediction

2012 IEEE/ACIS 11th International Conference on Computer and Information Science ◽

10.1109/icis.2012.89 ◽

2012 ◽

Cited By ~ 3

Author(s):

Wang Ding ◽

Dongbo Dai ◽

Jiang Xie ◽

Huiran Zhang ◽

Wu Zhang ◽

...

Keyword(s):

Secondary Structure ◽

Markov Model ◽

Hidden Markov Model ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Hidden Markov ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction

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A modified bidirectional hidden Markov model and its application in protein secondary structure prediction

2010 2nd International Conference on Advanced Computer Control ◽

10.1109/icacc.2010.5487140 ◽

2010 ◽

Cited By ~ 1

Author(s):

Hamid Pezeshk ◽

S Naghizadeh ◽

S A Malekpour ◽

C Eslahchi ◽

M Sadeghi

Keyword(s):

Secondary Structure ◽

Markov Model ◽

Hidden Markov Model ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Hidden Markov ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction

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Protein secondary structure prediction using three neural networks and a segmental semi Markov model

Mathematical Biosciences ◽

10.1016/j.mbs.2008.11.001 ◽

2009 ◽

Vol 217 (2) ◽

pp. 145-150 ◽

Cited By ~ 21

Author(s):

Seyed Amir Malekpour ◽

Sima Naghizadeh ◽

Hamid Pezeshk ◽

Mehdi Sadeghi ◽

Changiz Eslahchi

Keyword(s):

Neural Networks ◽

Secondary Structure ◽

Markov Model ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction

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Hidden Markov Models and Protein Secondary Structure Prediction

Bioinformatics and the Cell ◽

10.1007/978-3-319-90684-3_7 ◽

2018 ◽

pp. 145-172

Author(s):

Xuhua Xia

Keyword(s):

Secondary Structure ◽

Hidden Markov Models ◽

Structure Prediction ◽

Markov Models ◽

Secondary Structure Prediction ◽

Hidden Markov ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction

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Choosing the Optimal Hidden Markov Model for Secondary-Structure Prediction

IEEE Intelligent Systems ◽

10.1109/mis.2005.102 ◽

2005 ◽

Vol 20 (6) ◽

pp. 19-25 ◽

Cited By ~ 7

Author(s):

J. Martin ◽

J. Gibrat ◽

F. Rodolphe

Keyword(s):

Secondary Structure ◽

Markov Model ◽

Hidden Markov Model ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Hidden Markov

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A method of data mining using Hidden Markov Models (HMMs) for protein secondary structure prediction

Procedia Computer Science ◽

10.1016/j.procs.2018.01.096 ◽

2018 ◽

Vol 127 ◽

pp. 42-51 ◽

Cited By ~ 1

Author(s):

Mourad Lasfar ◽

Halima Bouden

Keyword(s):

Data Mining ◽

Secondary Structure ◽

Hidden Markov Models ◽

Structure Prediction ◽

Markov Models ◽

Secondary Structure Prediction ◽

Hidden Markov ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction

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Protein secondary structure prediction by combining hidden Markov models and sliding window scores

International Journal of Bioinformatics Research and Applications ◽

10.1504/ijbra.2005.008445 ◽

2005 ◽

Vol 1 (4) ◽

pp. 420 ◽

Cited By ~ 5

Author(s):

Wei Mou Zheng

Keyword(s):

Secondary Structure ◽

Hidden Markov Models ◽

Structure Prediction ◽

Markov Models ◽

Secondary Structure Prediction ◽

Hidden Markov ◽

Protein Secondary Structure ◽

Sliding Window ◽

Protein Secondary Structure Prediction

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Protein secondary structure prediction by merged hidden Markov models

ACM SIGBIO Newsletter ◽

10.1145/346335.346365 ◽

2000 ◽

Vol 20 (1) ◽

pp. 25

Author(s):

Christian A. Cumbaa

Keyword(s):

Secondary Structure ◽

Hidden Markov Models ◽

Structure Prediction ◽

Markov Models ◽

Secondary Structure Prediction ◽

Hidden Markov ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction

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Evolving Hidden Markov Models for Protein Secondary Structure Prediction

2005 IEEE Congress on Evolutionary Computation ◽

10.1109/cec.2005.1554664 ◽

2005 ◽

Author(s):

Kyoung-Jae Won ◽

T. Hamelryck ◽

A. Prugel-Bennett ◽

A. Krogh

Keyword(s):

Secondary Structure ◽

Hidden Markov Models ◽

Structure Prediction ◽

Markov Models ◽

Secondary Structure Prediction ◽

Hidden Markov ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction

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A Segmental Semi Markov Model for protein secondary structure prediction

Mathematical Biosciences ◽

10.1016/j.mbs.2009.07.004 ◽

2009 ◽

Vol 221 (2) ◽

pp. 130-135 ◽

Cited By ~ 7

Author(s):

Seyed Amir Malekpour ◽

Sima Naghizadeh ◽

Hamid Pezeshk ◽

Mehdi Sadeghi ◽

Changiz Eslahchi

Keyword(s):

Secondary Structure ◽

Markov Model ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction

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